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Top Results
1.
SNCA
[-19139bp]
2.
MAPT
3.
TMEM175
4.
ASH1L
5.
MCCC1
6.
STK39
[+24494bp]
7.
rs6430538
8.
BST1
9.
NUCKS1
[+4168bp]
10.
TMEM229B
11.
LRRK2
12.
GPNMB
13.
HLA-DQB1
[+30500bp]
14.
rs2414739
15.
BCKDK
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Possibility to exclude datasets entirely or list datasets as overlapping on the graph but not include study-specific results
Gene
Maps to the nearest gene in the range of +/- 50 kb, the label "intergenic" appears if the distance is larger
Alleles
Alleles 1/2 where 1 usually denotes the minor allele in Caucasians; for rs-numbers allele names are annotated to the plus (forward) strand
Study
Study label, e.g. "This study" for new data or first author's name and year of publication for published data
Population
Study population
Ethnicity
C = Caucasian descent, A = Asian ancestry, D = African descent, H = Hispanic, M = Other/mixed
GTs P 11
Number of homozygote patients for allele 1
GTs P 12
Number of heterozygote patients
GTs P 22
Number of homozygote patients for allele 2
GTs C 11
Number of homozygote controls for allele 1
GTs C 12
Number of heterozygote controls
GTs C 22
Number of homozygote controls for allele 2
Num ctrls
Number of controls genotyped for this polymorphism
OR
Additive/allelic odds ratio (OR); the OR refers to allele 1 as the effective allele (i.e. allele 2 has an OR of 1)
SE
Standard error
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NDUFV3
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NDUFV3
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NDUFV3
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