AP3D1, chr19:2100988-2164464 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs117022814 chr19:2209647 DOT1L All: C 96,015 12 T vs. C 0.033 (T) - 1.32 (1.18-1.48) 28 (0-64) 2.00e-06
Meta_image?name=rs117022814

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs78907979 chr19:2182767 DOT1L C - 11 T vs. C - 0.092 (T) <1 (-) 0 (-) >0.05
rs140042030 chr19:2192599 DOT1L C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs7249081 chr19:2157167 AP3D1 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs9676693 chr19:2116400 AP3D1 C - 12 T vs. C 0.217 (T) 0.367 (T) <1 (-) 14 (-) >0.05
rs62129538 chr19:2053795 MKNK2 [+2552bp] C - 10 A vs. G - - >1 (-) 30 (-) >0.05
rs62128365 chr19:2070785 MOB3A [-252bp] C - 11 C vs. G - - >1 (-) 8 (-) >0.05
rs10416900 chr19:2058694 MKNK2 [+7451bp] C - 11 T vs. C 0.233 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs77660303 chr19:2183585 DOT1L C - 11 C vs. G 0.017 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs12461951 chr19:2082582 MOB3A C - 11 A vs. G 0.083 (A) 0.075 (A) <1 (-) 7 (-) >0.05
rs2074959 chr19:2111649 AP3D1 C - 12 T vs. C 0.217 (C) 0.367 (C) >1 (-) 18 (-) >0.05
rs142358187 chr19:2213258 DOT1L C - 5 T vs. G - - <1 (-) 0 (-) >0.05
rs77188636 chr19:2196156 DOT1L C - 11 T vs. C 0.025 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs4476281 chr19:2072599 MOB3A C - 11 A vs. G 0.333 (A) 0.217 (A) <1 (-) 8 (-) >0.05
rs118038044 chr19:2152013 AP3D1 C - 12 T vs. C 0.042 (C) - >1 (-) 38 (-) >0.05
rs146526444 chr19:2166287 DOT1L C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs20567 chr19:2110746 AP3D1 C - 12 A vs. G 0.217 (A) 0.367 (A) <1 (-) 18 (-) >0.05
rs2074958 chr19:2110019 AP3D1 C - 12 T vs. C 0.192 (C) 0.367 (C) >1 (-) 16 (-) >0.05
rs4807213 chr19:2194769 DOT1L C - 12 A vs. G 0.492 (G) 0.45 (A) >1 (-) 0 (-) >0.05
rs10413398 chr19:2106696 AP3D1 C - 12 T vs. C 0.217 (C) 0.367 (C) >1 (-) 19 (-) >0.05
rs12104154 chr19:2097832 IZUMO4 C - 11 T vs. C 0.083 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs10405303 chr19:2067027 MOB3A [-4010bp] C - 11 A vs. G - - >1 (-) 24 (-) >0.05
rs2072306 chr19:2109019 AP3D1 C - 12 T vs. C 0.217 (C) 0.367 (C) >1 (-) 18 (-) >0.05
rs1074047 chr19:2158748 AP3D1 C - 12 A vs. G 0.483 (G) 0.475 (A) >1 (-) 0 (-) >0.05
rs2066775 chr19:2115493 AP3D1 C - 12 A vs. G 0.208 (G) 0.367 (G) >1 (-) 18 (-) >0.05
rs74254217 chr19:2162921 AP3D1 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs72981487 chr19:2075412 MOB3A C - 10 T vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs10426030 chr19:2066951 MOB3A [-4086bp] C - 11 A vs. T - - >1 (-) 22 (-) >0.05
rs143455408 chr19:2091460 MOB3A C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs116969905 chr19:2103255 AP3D1 C - 9 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs8100122 chr19:2106333 AP3D1 C - 12 A vs. G 0.217 (A) 0.308 (A) <1 (-) 19 (-) >0.05
rs137872210 chr19:2155040 AP3D1 C - 12 A vs. G - - <1 (-) 40 (-) >0.05
rs72981482 chr19:2072772 MOB3A C - 11 A vs. G 0.117 (A) - <1 (-) 17 (-) >0.05
rs59940956 chr19:2161437 AP3D1 C - 12 A vs. G - - >1 (-) 43 (-) >0.05
rs139459590 chr19:2076412 MOB3A C - 7 C vs. G - - <1 (-) 15 (-) >0.05
rs73512334 chr19:2104129 AP3D1 C - 12 A vs. C - 0.2 (C) >1 (-) 22 (-) >0.05
rs3815147 chr19:2192323 DOT1L C - 12 T vs. C 0.492 (T) 0.45 (T) >1 (-) 0 (-) >0.05
rs2074552 chr19:2214057 DOT1L C - 12 T vs. C 0.35 (C) 0.45 (C) >1 (-) 0 (-) >0.05
rs72985463 chr19:2198056 DOT1L C - 10 C vs. G 0.025 (C) - <1 (-) 9 (-) >0.05
rs7250336 chr19:2097986 IZUMO4 C - 11 T vs. C 0.158 (C) 0.108 (C) >1 (-) 17 (-) >0.05
rs6510645 chr19:2158398 AP3D1 C - 12 T vs. C 0.475 (C) 0.45 (T) >1 (-) 0 (-) >0.05
rs12983546 chr19:2195065 DOT1L C - 12 T vs. G 0.467 (T) 0.45 (G) <1 (-) 0 (-) >0.05
rs77652020 chr19:2093180 MOB3A C - 10 A vs. G 0.05 (A) 0.05 (A) <1 (-) 0 (-) >0.05
rs2074893 chr19:2078409 MOB3A C - 11 A vs. G 0.358 (G) 0.208 (G) >1 (-) 12 (-) >0.05
rs35917214 chr19:2135714 AP3D1 C - 11 T vs. G 0.025 (G) 0.142 (G) <1 (-) 34 (-) >0.05
rs11666848 chr19:2115918 AP3D1 C - 12 T vs. C 0.217 (T) 0.183 (T) <1 (-) 13 (-) >0.05
rs4807196 chr19:2063483 MOB3A [-7554bp] C - 11 A vs. C - - <1 (-) 37 (-) >0.05
rs1076328 chr19:2078898 MOB3A C - 11 T vs. C 0.342 (C) 0.183 (C) >1 (-) 13 (-) >0.05
rs2240129 chr19:2197734 DOT1L C - 12 A vs. G 0.467 (A) 0.45 (G) <1 (-) 0 (-) >0.05
rs12973409 chr19:2196963 DOT1L C - 12 T vs. C 0.467 (C) 0.45 (T) >1 (-) 0 (-) >0.05
rs960492 chr19:2165058 DOT1L C - 12 A vs. G - 0.133 (G) >1 (-) 33 (-) >0.05

Association studies for this region [+]