C19orf35, chr19:2274631-2282181 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs876692 chr19:2322165 LSM7 All: C 99,286 13 A vs. G 0.05 (A) 0.467 (A) 1.21 (1.12-1.30) 34 (0-66) 1.33e-06
Meta_image?name=rs876692

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs7253353 chr19:2287000 LINGO3 [-2774bp] C - 11 A vs. T 0.117 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs118034773 chr19:2329771 LSM7 [+1152bp] C - 6 A vs. T 0.008 (T) - >1 (-) 0 (-) >0.05
rs28432934 chr19:2292134 LINGO3 C - 11 A vs. C 0.2 (C) 0.442 (A) <1 (-) 0 (-) >0.05
rs56054943 chr19:2279190 C19orf35 C - 11 A vs. G 0.383 (G) 0.358 (A) <1 (-) 0 (-) >0.05
rs146069600 chr19:2240060 SF3A2 C - 6 T vs. G - - >1 (-) 38 (-) >0.05
rs149949768 chr19:2244059 SF3A2 C - 6 T vs. C - - >1 (-) 39 (-) >0.05
rs55861568 chr19:2280211 C19orf35 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs7252541 chr19:2292741 LINGO3 C - 11 C vs. G - - <1 (-) 0 (-) >0.05
rs145366197 chr19:2292293 LINGO3 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs12151295 chr19:2314180 LINGO3 [+6024bp] C - 11 A vs. G 0.008 (A) 0.058 (A) >1 (-) 26 (-) >0.05
rs62119705 chr19:2279746 C19orf35 C - 10 T vs. C 0.35 (C) 0.342 (C) <1 (-) 20 (-) >0.05
rs6510654 chr19:2284958 C19orf35 [+2777bp] C - 11 T vs. C 0.2 (C) 0.375 (T) <1 (-) 0 (-) >0.05
rs8110704 chr19:2293602 LINGO3 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs144270226 chr19:2285462 C19orf35 [+3281bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs78481493 chr19:2238719 SF3A2 C - 6 A vs. C 0.025 (A) 0.033 (A) <1 (-) 2 (-) >0.05
rs757233 chr19:2285196 C19orf35 [+3015bp] C - 11 T vs. C 0.1 (C) 0.108 (C) <1 (-) 0 (-) >0.05
rs146982937 chr19:2240303 SF3A2 C - 11 A vs. G - - <1 (-) 31 (-) >0.05
rs77337731 chr19:2225082 DOT1L C - 11 A vs. G 0.025 (G) 0.1 (G) >1 (-) 0 (-) >0.05
rs10420708 chr19:2283384 C19orf35 [+1203bp] C - 11 T vs. G 0.15 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs117415941 chr19:2237261 PLEKHJ1 C - 11 T vs. G 0.042 (G) - >1 (-) 29 (-) >0.05
rs8111911 chr19:2306575 LINGO3 C - 11 A vs. G 0.283 (G) 0.375 (A) <1 (-) 48 (-) >0.05
rs2302061 chr19:2226772 DOT1L C - 11 C vs. G - 0.225 (C) <1 (-) 29 (-) >0.05
rs10419748 chr19:2310723 LINGO3 [+2567bp] C - 12 A vs. G 0.233 (G) 0.367 (A) <1 (-) 31 (-) >0.05
rs79827094 chr19:2325130 LSM7 C - 10 A vs. C 0.15 (A) - >1 (-) 34 (-) >0.05
rs80292256 chr19:2331429 LSM7 [+2810bp] C - 10 T vs. C 0.158 (T) - >1 (-) 31 (-) >0.05
rs2074861 chr19:2246652 SF3A2 C - 11 A vs. G 0.142 (G) 0.442 (G) >1 (-) 0 (-) >0.05
rs2074860 chr19:2244072 SF3A2 C - 11 A vs. G 0.142 (G) 0.433 (G) >1 (-) 0 (-) >0.05
rs113860855 chr19:2328245 LSM7 C - 5 A vs. G - - >1 (-) 41 (-) >0.05
rs77954208 chr19:2332009 LSM7 [+3390bp] C - 10 A vs. G 0.158 (A) - >1 (-) 33 (-) >0.05
rs73520548 chr19:2330962 LSM7 [+2343bp] C - 10 A vs. G 0.167 (A) - >1 (-) 33 (-) >0.05
rs7252557 chr19:2308432 LINGO3 [+276bp] C - 11 T vs. C 0.283 (C) 0.383 (T) <1 (-) 43 (-) >0.05
rs733846 chr19:2241327 SF3A2 C - 11 T vs. G 0.133 (G) 0.442 (G) >1 (-) 0 (-) >0.05
rs8113401 chr19:2309033 LINGO3 [+877bp] C - 11 T vs. C 0.192 (C) 0.367 (T) <1 (-) 49 (-) >0.05
rs1558118 chr19:2232083 DOT1L C - 11 T vs. G 0.067 (T) 0.208 (T) <1 (-) 29 (-) >0.05
rs77606905 chr19:2330570 LSM7 [+1951bp] C - 10 A vs. C 0.142 (C) - <1 (-) 24 (-) >0.05
rs3761022 chr19:2236928 PLEKHJ1 C - 10 T vs. C - 0.108 (T) <1 (-) 13 (-) >0.05
rs8106304 chr19:2308970 LINGO3 [+814bp] C - 12 A vs. G - - >1 (-) 37 (-) >0.05
rs11548482 chr19:2231057 DOT1L C - 11 A vs. G 0.025 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs117717684 chr19:2236582 PLEKHJ1 C - 11 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs76064118 chr19:2235284 PLEKHJ1 C - 11 T vs. C 0.025 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs77682561 chr19:2239198 SF3A2 C - 11 T vs. C - 0.067 (T) <1 (-) 0 (-) >0.05
rs77585572 chr19:2233482 PLEKHJ1 C - 11 A vs. G 0.025 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs80297278 chr19:2243772 SF3A2 C - 11 A vs. C - - <1 (-) 23 (-) >0.05
rs59357019 chr19:2247086 SF3A2 C - 9 T vs. C - 0.108 (T) <1 (-) 26 (-) >0.05
rs7253181 chr19:2238667 SF3A2 C - 11 T vs. G 0.217 (G) 0.342 (G) <1 (-) 0 (-) >0.05
rs117374034 chr19:2244692 SF3A2 C - 11 T vs. C 0.033 (T) - <1 (-) 22 (-) >0.05
rs8106339 chr19:2329914 LSM7 [+1295bp] C - 5 T vs. C 0.033 (T) 0.225 (T) >1 (-) 37 (-) >0.05
rs10518240 chr19:2239966 SF3A2 C - 11 A vs. T 0.025 (T) - >1 (-) 0 (-) >0.05
rs2159032 chr19:2242044 SF3A2 C - 10 C vs. G - 0.1 (G) >1 (-) 28 (-) >0.05
rs75230609 chr19:2303576 LINGO3 C - 5 A vs. G 0.058 (G) 0.208 (G) <1 (-) 55 (-) >0.05

Association studies for this region [+]