CCNT2, chr2:135675805-135716912 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6738563 chr2:135689188 CCNT2 All: C 108,990 15 T vs. G 0.442 (T) - 0.90 (0.87-0.93) 27 (0-61) 8.60e-09
Meta_image?name=rs6738563

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6738563 chr2:135689188 CCNT2 All: C 108,990 15 T vs. G 0.442 (T) - 0.90 (0.87-0.93) 27 (0-61) 8.60e-09
rs1530559 chr2:135755629 MAP3K19 All: C 108,990 15 G vs. A 0.392 (G) 0.033 (A) 0.90 (0.86-0.93) 27 (0-61) 1.70e-08
rs1979033 chr2:135705558 CCNT2 C - 13 A vs. G 0.442 (A) 0.0 (G) <1 (-) 32 (-) <1.00e-06
rs56271357 chr2:135720715 MAP3K19 [-1346bp] All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 1.09e-06
rs62168897 chr2:135717997 CCNT2 [+1085bp] All: C 108,990 15 T vs. C 0.383 (T) 0.058 (C) 0.92 (0.89-0.95) 27 (0-61) 1.16e-06
rs3814355 chr2:135711516 CCNT2 All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 28 (0-61) 1.22e-06
rs10166142 chr2:135710322 CCNT2 All: C 108,990 15 G vs. A 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 28 (0-61) 1.28e-06
rs3769023 chr2:135713703 CCNT2 All: C 108,990 15 A vs. G 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 28 (0-61) 1.29e-06
rs3814354 chr2:135711657 CCNT2 All: C 108,990 15 A vs. G 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 28 (0-61) 1.29e-06
rs10187990 chr2:135697557 CCNT2 All: C 108,990 15 G vs. A 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 29 (0-62) 1.44e-06
rs1947112 chr2:135715957 CCNT2 All: C 108,990 15 G vs. A 0.383 (G) 0.075 (A) 0.92 (0.89-0.95) 28 (0-61) 1.48e-06
rs1374289 chr2:135694379 CCNT2 All: C 108,990 15 T vs. C 0.383 (T) 0.058 (C) 0.92 (0.89-0.95) 29 (0-62) 1.49e-06
rs4953938 chr2:135694848 CCNT2 All: C 108,990 15 A vs. G 0.383 (A) 0.075 (G) 0.92 (0.89-0.95) 30 (0-62) 1.49e-06
rs2166480 chr2:135637338 ACMSD All: C 108,990 15 A vs. G 0.392 (A) 0.075 (G) 0.92 (0.89-0.95) 26 (0-60) 1.51e-06
rs6430554 chr2:135638461 ACMSD All: C 108,990 15 T vs. C 0.392 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 1.56e-06
rs1592 chr2:135722143 MAP3K19 All: C 108,990 15 C vs. A 0.383 (C) 0.383 (A) 0.92 (0.89-0.95) 29 (0-62) 1.64e-06
rs1446524 chr2:135631331 ACMSD All: C 108,990 15 G vs. A 0.392 (G) 0.058 (A) 0.92 (0.89-0.95) 26 (0-60) 1.69e-06
rs4954197 chr2:135662244 ACMSD [+2640bp] All: C 108,990 15 A vs. G 0.392 (A) 0.075 (G) 0.92 (0.89-0.95) 22 (0-58) 1.72e-06
rs7589297 chr2:135652399 ACMSD All: C 108,990 15 A vs. C 0.392 (A) 0.067 (C) 0.92 (0.89-0.95) 25 (0-59) 1.73e-06
rs12469941 chr2:135629927 ACMSD All: C 108,990 15 T vs. C 0.392 (T) 0.058 (C) 0.92 (0.89-0.95) 26 (0-60) 1.76e-06
rs1374291 chr2:135654338 ACMSD All: C 108,990 15 C vs. T 0.383 (C) 0.075 (T) 0.92 (0.89-0.95) 25 (0-59) 1.76e-06
rs2053727 chr2:135643298 ACMSD All: C 108,990 15 T vs. C 0.392 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 1.79e-06
rs6733547 chr2:135758231 MAP3K19 All: C 108,990 15 T vs. G 0.117 (T) 0.217 (T) 0.89 (0.84-0.93) 0 (0-53) 1.79e-06
rs1446525 chr2:135637847 ACMSD All: C 108,990 15 A vs. G 0.375 (A) 0.075 (G) 0.92 (0.89-0.95) 25 (0-60) 1.83e-06
rs2322251 chr2:135671302 CCNT2 [-4503bp] All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 1.92e-06
rs6430555 chr2:135647659 ACMSD All: C 108,990 15 C vs. A 0.383 (C) 0.075 (A) 0.92 (0.89-0.95) 25 (0-60) 1.93e-06
rs10176573 chr2:135657471 ACMSD All: C 108,990 15 A vs. C 0.375 (A) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 1.97e-06
rs4954196 chr2:135662016 ACMSD [+2412bp] All: C 108,990 15 G vs. A 0.392 (G) - 0.92 (0.89-0.95) 25 (0-60) 1.97e-06
rs12469411 chr2:135664556 ACMSD [+4952bp] All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 1.99e-06
rs62168872 chr2:135661747 ACMSD [+2143bp] All: C 108,990 15 T vs. C 0.392 (T) 0.058 (C) 0.92 (0.89-0.95) 25 (0-60) 2.08e-06
rs6733130 chr2:135666553 ACMSD [+6949bp] All: C 108,990 15 C vs. A 0.383 (C) 0.075 (A) 0.92 (0.89-0.95) 26 (0-60) 2.08e-06
rs62168891 chr2:135672187 CCNT2 [-3618bp] All: C 108,990 15 T vs. C 0.383 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-59) 2.10e-06
rs4954193 chr2:135642180 ACMSD All: C 108,990 15 G vs. A 0.392 (G) 0.058 (A) 0.92 (0.89-0.95) 26 (0-60) 2.18e-06
rs1374287 chr2:135667201 ACMSD [+7597bp] All: C 108,990 15 T vs. C 0.392 (T) 0.058 (C) 0.92 (0.89-0.95) 25 (0-60) 2.19e-06
rs10928523 chr2:135665461 ACMSD [+5857bp] All: C 108,990 15 T vs. C 0.4 (T) 0.075 (C) 0.92 (0.89-0.95) 25 (0-60) 2.21e-06
rs1374288 chr2:135667053 ACMSD [+7449bp] All: C 108,990 15 T vs. C 0.392 (T) 0.075 (C) 0.92 (0.89-0.95) 26 (0-60) 2.52e-06
rs1374292 chr2:135654168 ACMSD All: C 108,990 15 A vs. G 0.392 (A) 0.058 (G) 0.92 (0.89-0.96) 23 (0-58) 2.82e-06
rs766271 chr2:135667131 ACMSD [+7527bp] All: C 108,990 15 T vs. C 0.392 (T) 0.367 (C) 0.93 (0.90-0.96) 26 (0-60) 3.50e-06
rs62168871 chr2:135661678 ACMSD [+2074bp] All: C 108,990 15 G vs. A - - 0.93 (0.90-0.96) 25 (0-59) 3.76e-06
rs72976313 chr2:135766890 MAP3K19 All: C 108,990 15 A vs. G 0.083 (A) 0.217 (A) 0.88 (0.84-0.93) 0 (0-50) 8.67e-06
rs1348790 chr2:135639975 ACMSD C - 13 C vs. G 0.392 (G) 0.058 (C) >1 (-) 31 (-) <1.00e-04
rs766270 chr2:135666926 ACMSD [+7322bp] C - 13 C vs. G 0.392 (C) 0.075 (G) <1 (-) 28 (-) <1.00e-04
rs4953945 chr2:135766072 MAP3K19 C - 13 C vs. G 0.125 (G) 0.217 (G) >1 (-) 6 (-) <1.00e-04
rs11895609 chr2:135758520 MAP3K19 C - 13 A vs. T 0.117 (T) 0.217 (T) >1 (-) 5 (-) <1.00e-04
rs7606440 chr2:135652901 ACMSD All: C 108,990 15 T vs. C - - 1.07 (1.04-1.11) 48 (6-72) 8.96e-05
rs4954192 chr2:135632981 ACMSD All: C 108,990 15 T vs. C 0.35 (T) 0.025 (C) 0.94 (0.91-0.97) 38 (0-67) 1.01e-04
rs6738113 chr2:135634581 ACMSD C - 13 A vs. G - - <1 (-) 40 (-) <0.05
rs74265413 chr2:135649653 ACMSD C - 13 C vs. G 0.333 (C) 0.483 (C) <1 (-) 41 (-) <0.05
rs6430553 chr2:135631400 ACMSD C - 13 T vs. C 0.35 (T) 0.367 (C) <1 (-) 41 (-) <0.05
rs7593049 chr2:135653355 ACMSD C - 13 T vs. C - - <1 (-) 41 (-) <0.05

Association studies for this region [+]