CCNT2, chr2:135675805-135716912 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6738563 chr2:135689188 CCNT2 All: C 108,990 15 T vs. G 0.442 (T) - 0.90 (0.87-0.93) 27 (0-61) 8.60e-09
Meta_image?name=rs6738563

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62168867 chr2:135639377 ACMSD C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs12151827 chr2:135673387 CCNT2 [-2418bp] C - 13 T vs. C 0.158 (C) 0.408 (C) >1 (-) 0 (-) >0.05
rs10928524 chr2:135670144 CCNT2 [-5661bp] C - 13 T vs. C 0.158 (T) 0.408 (T) <1 (-) 0 (-) >0.05
rs62168907 chr2:135759797 MAP3K19 C - 13 T vs. G 0.033 (T) - <1 (-) 32 (-) >0.05
rs1867837 chr2:135759145 MAP3K19 C - 13 T vs. C 0.033 (C) - >1 (-) 32 (-) >0.05
rs78462373 chr2:135752261 MAP3K19 C - 13 T vs. C 0.108 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs142915061 chr2:135640965 ACMSD C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs77259636 chr2:135630648 ACMSD C - 13 A vs. T 0.008 (T) - <1 (-) 0 (-) >0.05
rs114063586 chr2:135727643 MAP3K19 C - 6 T vs. C 0.008 (T) - >1 (-) 0 (-) >0.05
rs62168899 chr2:135723715 MAP3K19 C - 13 A vs. G 0.117 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs78369381 chr2:135765579 MAP3K19 C - 12 C vs. G 0.033 (G) - >1 (-) 33 (-) >0.05
rs62168908 chr2:135765089 MAP3K19 C - 12 A vs. T 0.033 (A) - <1 (-) 33 (-) >0.05
rs3769025 chr2:135677161 CCNT2 C - 13 A vs. G 0.1 (G) 0.075 (G) >1 (-) 0 (-) >0.05
rs4954200 chr2:135700981 CCNT2 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs142540227 chr2:135753327 MAP3K19 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs60673237 chr2:135764184 MAP3K19 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs79401460 chr2:135628406 ACMSD C - 13 T vs. C 0.042 (T) 0.117 (T) <1 (-) 5 (-) >0.05
rs72976310 chr2:135764753 MAP3K19 C - 13 T vs. G - 0.033 (G) >1 (-) 0 (-) >0.05
rs55786033 chr2:135670724 CCNT2 [-5081bp] C - 13 C vs. G - - >1 (-) 8 (-) >0.05
rs77456310 chr2:135704537 CCNT2 C - 13 A vs. G 0.033 (A) 0.308 (A) <1 (-) 13 (-) >0.05
rs41487551 chr2:135709501 CCNT2 C - 13 A vs. G 0.042 (G) 0.108 (G) >1 (-) 16 (-) >0.05
rs79100316 chr2:135666945 ACMSD [+7341bp] C - 13 A vs. G 0.042 (A) 0.317 (A) <1 (-) 8 (-) >0.05
rs17258232 chr2:135715219 CCNT2 C - 13 A vs. G 0.042 (A) - <1 (-) 18 (-) >0.05
rs56069749 chr2:135721430 MAP3K19 [-631bp] C - 13 A vs. G 0.033 (A) - <1 (-) 17 (-) >0.05
rs16831203 chr2:135721175 MAP3K19 [-886bp] C - 13 A vs. C 0.033 (C) 0.325 (C) >1 (-) 15 (-) >0.05
rs115020282 chr2:135716980 CCNT2 [+68bp] C - 7 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs147900761 chr2:135716982 CCNT2 [+70bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs77990738 chr2:135649525 ACMSD C - 8 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs79176028 chr2:135647613 ACMSD C - 8 A vs. C 0.017 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs76455831 chr2:135645913 ACMSD C - 8 T vs. C - 0.125 (C) <1 (-) 0 (-) >0.05
rs145866425 chr2:135718417 CCNT2 [+1505bp] C - 6 C vs. G - - >1 (-) 6 (-) >0.05
rs1348791 chr2:135640212 ACMSD C - 8 A vs. G - 0.133 (A) >1 (-) 0 (-) >0.05
rs143847924 chr2:135638599 ACMSD C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs78543279 chr2:135638830 ACMSD C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs78749977 chr2:135723546 MAP3K19 C - 6 A vs. G - 0.3 (A) >1 (-) 0 (-) >0.05
rs78930209 chr2:135628074 ACMSD C - 8 A vs. G 0.017 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs113105440 chr2:135626910 ACMSD C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs7564746 chr2:135625901 ACMSD C - 8 T vs. C - 0.133 (C) <1 (-) 0 (-) >0.05
rs6706092 chr2:135719854 MAP3K19 [-2207bp] C - 6 A vs. G - 0.308 (G) <1 (-) 0 (-) >0.05
rs4954204 chr2:135719510 MAP3K19 [-2551bp] C - 6 A vs. G - 0.308 (G) <1 (-) 0 (-) >0.05
rs4599167 chr2:135726683 MAP3K19 C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs145641777 chr2:135655384 ACMSD C - 4 T vs. C - - <1 (-) 0 (-) >0.05
rs140022497 chr2:135745304 MAP3K19 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs6753639 chr2:135761271 MAP3K19 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs6729579 chr2:135761078 MAP3K19 C - 10 A vs. G 0.067 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs16831243 chr2:135762344 MAP3K19 C - 10 T vs. C 0.067 (T) 0.45 (T) <1 (-) 0 (-) >0.05
rs16855615 chr2:135714156 CCNT2 C - 6 A vs. G - 0.308 (A) >1 (-) 0 (-) >0.05
rs74957643 chr2:135723700 MAP3K19 C - 5 T vs. C - 0.275 (C) <1 (-) 0 (-) >0.05
rs7606415 chr2:135762980 MAP3K19 C - 10 T vs. C 0.067 (T) 0.45 (T) <1 (-) 0 (-) >0.05
rs7569995 chr2:135763280 MAP3K19 C - 10 A vs. G 0.067 (G) 0.45 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]