CCNT2, chr2:135675805-135716912 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6738563 chr2:135689188 CCNT2 All: C 108,990 15 T vs. G 0.442 (T) - 0.90 (0.87-0.93) 27 (0-61) 8.60e-09
Meta_image?name=rs6738563

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs141228035 chr2:135743004 MAP3K19 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs62168894 chr2:135682451 CCNT2 C - 5 T vs. C - - >1 (-) 9 (-) >0.05
rs16831201 chr2:135720768 MAP3K19 [-1293bp] C - 4 A vs. G 0.017 (A) 0.133 (A) <1 (-) 0 (-) >0.05
rs78776859 chr2:135668003 CCNT2 [-7802bp] C - 7 A vs. G - 0.133 (A) >1 (-) 0 (-) >0.05
rs16831175 chr2:135708814 CCNT2 C - 6 A vs. C - 0.308 (C) <1 (-) 0 (-) >0.05
rs45624839 chr2:135685340 CCNT2 C - 6 A vs. G - 0.317 (A) >1 (-) 0 (-) >0.05
rs74621611 chr2:135685905 CCNT2 C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs80267596 chr2:135685975 CCNT2 C - 6 A vs. C - - <1 (-) 0 (-) >0.05
rs7592222 chr2:135708609 CCNT2 C - 6 T vs. G - 0.308 (G) <1 (-) 0 (-) >0.05
rs76005854 chr2:135662738 ACMSD [+3134bp] C - 7 A vs. G - 0.133 (A) >1 (-) 0 (-) >0.05
rs75582739 chr2:135651313 ACMSD C - 7 T vs. C 0.017 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs2218558 chr2:135675887 CCNT2 C - 7 A vs. G 0.017 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs74265416 chr2:135673131 CCNT2 [-2674bp] C - 7 T vs. C 0.017 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs79001490 chr2:135648870 ACMSD C - 7 T vs. C 0.017 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs62168895 chr2:135706321 CCNT2 C - 13 T vs. G 0.033 (T) - >1 (-) 0 (-) >0.05
rs16831194 chr2:135719571 MAP3K19 [-2490bp] C - 7 T vs. C 0.017 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs4954206 chr2:135721537 MAP3K19 [-524bp] C - 3 T vs. C - 0.308 (C) <1 (-) 0 (-) >0.05
rs76619688 chr2:135766853 MAP3K19 C - 6 A vs. G 0.033 (G) - >1 (-) 6 (-) >0.05
rs77231983 chr2:135688251 CCNT2 C - 6 A vs. G - 0.325 (A) >1 (-) 0 (-) >0.05
rs77807793 chr2:135688921 CCNT2 C - 5 T vs. G 0.017 (G) 0.2 (G) >1 (-) 0 (-) >0.05
rs16831216 chr2:135722881 MAP3K19 C - 6 T vs. C 0.017 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs141984558 chr2:135690482 CCNT2 C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs149400845 chr2:135689737 CCNT2 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs57774001 chr2:135643421 ACMSD C - 7 A vs. G - 0.308 (A) >1 (-) 0 (-) >0.05
rs75004950 chr2:135755899 MAP3K19 C - 4 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs4954203 chr2:135719408 CCNT2 [+2496bp] C - 6 A vs. G - 0.308 (G) <1 (-) 0 (-) >0.05
rs150305935 chr2:135706749 CCNT2 C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs41420545 chr2:135699846 CCNT2 C - 5 A vs. G - 0.308 (G) <1 (-) 0 (-) >0.05
rs147951103 chr2:135751383 MAP3K19 C - 3 T vs. C - - >1 (-) 41 (-) >0.05
rs140437403 chr2:135691700 CCNT2 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs56675527 chr2:135698512 CCNT2 C - 5 T vs. G - 0.317 (T) >1 (-) 0 (-) >0.05
rs79434847 chr2:135629907 ACMSD C - 5 T vs. C - 0.308 (C) >1 (-) 0 (-) >0.05
rs76266713 chr2:135665668 ACMSD [+6064bp] C - 5 T vs. C - 0.3 (T) <1 (-) 0 (-) >0.05
rs16831129 chr2:135631719 ACMSD C - 5 A vs. G - 0.308 (A) <1 (-) 0 (-) >0.05
rs78163964 chr2:135632191 ACMSD C - 5 A vs. T - 0.308 (A) <1 (-) 0 (-) >0.05
rs12618930 chr2:135637349 ACMSD C - 5 T vs. C - 0.308 (T) <1 (-) 0 (-) >0.05
rs75627191 chr2:135645319 ACMSD C - 5 A vs. C - 0.275 (C) >1 (-) 0 (-) >0.05
rs2990058 chr2:135649339 ACMSD C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs76065968 chr2:135667599 ACMSD [+7995bp] C - 5 T vs. C - 0.308 (C) >1 (-) 0 (-) >0.05
rs79277366 chr2:135668798 CCNT2 [-7007bp] C - 5 T vs. C - 0.308 (C) >1 (-) 0 (-) >0.05
rs75030638 chr2:135682056 CCNT2 C - 5 C vs. G - 0.317 (C) >1 (-) 0 (-) >0.05
rs45607138 chr2:135675228 CCNT2 [-577bp] C - 5 T vs. C - 0.308 (T) >1 (-) 0 (-) >0.05
rs77628397 chr2:135673214 CCNT2 [-2591bp] C - 5 A vs. G - 0.308 (A) <1 (-) 0 (-) >0.05
rs7596032 chr2:135674809 CCNT2 [-996bp] C - 5 T vs. G - 0.308 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]