CCT3, chr1:156278759-156337664 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138107820 chr1:156299132 CCT3 All: C 96,250 12 C vs. T - - 0.59 (0.45-0.78) 0 (0-32) 1.55e-04
Meta_image?name=rs138107820

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs138107820 chr1:156299132 CCT3 All: C 96,250 12 C vs. T - - 0.59 (0.45-0.78) 0 (0-32) 1.55e-04
rs138740707 chr1:156333924 CCT3 C - 6 T vs. C - - <1 (-) 0 (-) <0.05
rs11264477 chr1:156321154 CCT3 C - 13 T vs. C 0.25 (T) 0.2 (T) >1 (-) 0 (-) <0.05
rs12122180 chr1:156244559 SMG5 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) <0.05
rs12747311 chr1:156371691 C1orf61 [-2351bp] C - 9 T vs. C 0.15 (T) - >1 (-) 0 (-) <0.05
rs12146030 chr1:156233787 SMG5 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs10908493 chr1:156247481 SMG5 C - 13 T vs. C - - >1 (-) 0 (-) <0.05
rs12139321 chr1:156230429 SMG5 C - 13 A vs. G 0.3 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs12118238 chr1:156235221 SMG5 C - 13 A vs. G 0.3 (A) 0.208 (A) >1 (-) 0 (-) <0.05
rs11264463 chr1:156242806 SMG5 C - 13 A vs. G 0.308 (G) 0.2 (G) <1 (-) 0 (-) <0.05
rs12123265 chr1:156323722 CCT3 C - 13 T vs. C - - <1 (-) 0 (-) <0.05
rs2273832 chr1:156233143 SMG5 C - 13 A vs. G 0.3 (G) 0.208 (G) <1 (-) 0 (-) <0.05
rs12022194 chr1:156312331 CCT3 C - 13 A vs. T 0.3 (A) 0.2 (A) >1 (-) 0 (-) <0.05
rs11264462 chr1:156241728 SMG5 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs2273833 chr1:156233189 SMG5 C - 13 T vs. C 0.3 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs12563631 chr1:156258953 TMEM79 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs3806407 chr1:156251742 SMG5 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs12132919 chr1:156318141 CCT3 C - 13 A vs. C 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs2296375 chr1:156309372 CCT3 C - 13 C vs. G 0.3 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs11264475 chr1:156306918 CCT3 C - 13 A vs. G 0.283 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs12044543 chr1:156293971 CCT3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12044545 chr1:156293984 CCT3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs12022657 chr1:156314147 CCT3 C - 13 A vs. G 0.283 (G) 0.225 (G) <1 (-) 0 (-) >0.05
rs11264476 chr1:156307180 CCT3 C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs12117903 chr1:156311165 CCT3 C - 13 T vs. G 0.3 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs12142808 chr1:156230546 SMG5 C - 13 A vs. G 0.3 (A) 0.208 (A) >1 (-) 1 (-) >0.05
rs12116478 chr1:156291435 CCT3 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs2277871 chr1:156246742 SMG5 C - 13 A vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs12117951 chr1:156305286 CCT3 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs11264464 chr1:156250887 SMG5 C - 13 T vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs3806408 chr1:156252137 SMG5 C - 13 A vs. C 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs28372828 chr1:156253031 TMEM79 C - 13 C vs. G 0.3 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs3806409 chr1:156252291 SMG5 C - 13 A vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs12138564 chr1:156291600 CCT3 C - 13 T vs. G 0.283 (T) 0.1 (T) >1 (-) 0 (-) >0.05
rs112597390 chr1:156256729 TMEM79 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12038203 chr1:156248265 SMG5 C - 13 T vs. C 0.3 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs12128785 chr1:156269389 VHLL C - 13 A vs. G 0.3 (G) 0.175 (G) <1 (-) 0 (-) >0.05
rs10752615 chr1:156248609 SMG5 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs12038217 chr1:156248297 SMG5 C - 13 T vs. C 0.3 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs2277870 chr1:156246792 SMG5 C - 13 T vs. C 0.3 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs67034206 chr1:156270260 VHLL [+832bp] C - 13 T vs. C 0.3 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs12027741 chr1:156248148 SMG5 C - 13 T vs. G 0.3 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs12027103 chr1:156244856 SMG5 C - 13 A vs. G 0.3 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs6679145 chr1:156256000 TMEM79 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs2270291 chr1:156244992 SMG5 C - 13 C vs. G 0.3 (C) 0.2 (C) >1 (-) 0 (-) >0.05
rs58390527 chr1:156334116 CCT3 C - 13 T vs. C 0.292 (T) 0.2 (T) >1 (-) 0 (-) >0.05
rs12117947 chr1:156244058 SMG5 C - 13 A vs. T 0.3 (T) 0.2 (T) <1 (-) 0 (-) >0.05
rs10908495 chr1:156263940 C1orf85 C - 13 T vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05
rs10908494 chr1:156263097 C1orf85 C - 13 A vs. G 0.3 (G) 0.183 (G) <1 (-) 0 (-) >0.05
rs6800 chr1:156262653 TMEM79 C - 13 A vs. C 0.3 (C) 0.2 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]