CPT2, chr1:53662101-53679869 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79901635 chr1:53639682 CPT2 [-22419bp] C - 9 T vs. C 0.025 (T) - >1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2062015 chr1:53665151 CPT2 C - 13 C vs. G 0.45 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs12130482 chr1:53638694 CPT2 [-23407bp] C - 13 T vs. G 0.292 (G) 0.142 (T) >1 (-) 0 (-) >0.05
rs6676003 chr1:53696784 MAGOH C - 13 T vs. G 0.433 (T) 0.4 (T) <1 (-) 0 (-) >0.05
rs75601127 chr1:53681287 C1orf123 C - 9 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
rs4244641 chr1:53650094 CPT2 [-12007bp] C - 13 T vs. C 0.25 (C) 0.442 (T) >1 (-) 0 (-) >0.05
rs3125256 chr1:53644535 CPT2 [-17566bp] C - 13 A vs. T 0.258 (A) 0.442 (T) <1 (-) 0 (-) >0.05
rs3102047 chr1:53642449 CPT2 [-19652bp] C - 13 A vs. G 0.242 (A) 0.442 (G) <1 (-) 0 (-) >0.05
rs10888776 chr1:53661966 CPT2 [-135bp] C - 13 A vs. G 0.467 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs3125255 chr1:53641358 CPT2 [-20743bp] C - 13 T vs. C 0.25 (T) 0.417 (C) <1 (-) 0 (-) >0.05
rs3766759 chr1:53666965 CPT2 C - 13 T vs. G 0.425 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs6663288 chr1:53639748 CPT2 [-22353bp] C - 13 A vs. G 0.283 (G) 0.142 (A) >1 (-) 0 (-) >0.05
rs59327204 chr1:53668954 CPT2 C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs3102042 chr1:53643674 CPT2 [-18427bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs35728069 chr1:53703031 MAGOH C - 9 A vs. C - - <1 (-) 0 (-) >0.05
rs3125252 chr1:53636616 CPT2 [-25485bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs3125251 chr1:53635011 SLC1A7 [+26722bp] C - 13 A vs. T 0.25 (A) 0.458 (T) <1 (-) 0 (-) >0.05
rs11590199 chr1:53637636 CPT2 [-24465bp] C - 13 T vs. C 0.275 (C) 0.133 (T) >1 (-) 0 (-) >0.05
rs12074944 chr1:53616724 SLC1A7 [+8435bp] C - 13 T vs. G 0.108 (T) - >1 (-) 0 (-) >0.05
rs1288334 chr1:53630671 SLC1A7 [+22382bp] C - 13 T vs. C 0.092 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs150731009 chr1:53654762 CPT2 [-7339bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs1288335 chr1:53630531 SLC1A7 [+22242bp] C - 13 A vs. G 0.05 (G) 0.042 (G) <1 (-) 0 (-) >0.05
rs79022991 chr1:53614403 SLC1A7 [+6114bp] C - 13 C vs. G 0.1 (G) 0.042 (G) <1 (-) 0 (-) >0.05
rs7556421 chr1:53619482 SLC1A7 [+11193bp] C - 13 T vs. C 0.492 (T) 0.45 (C) <1 (-) 0 (-) >0.05
rs1288336 chr1:53630010 SLC1A7 [+21721bp] C - 13 C vs. G 0.083 (C) - >1 (-) 0 (-) >0.05
rs78250534 chr1:53612267 SLC1A7 [+3978bp] C - 13 T vs. C 0.108 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs4926960 chr1:53625039 SLC1A7 [+16750bp] C - 13 T vs. G 0.492 (T) 0.475 (G) <1 (-) 0 (-) >0.05
rs1564485 chr1:53621628 SLC1A7 [+13339bp] C - 13 A vs. T 0.492 (T) 0.467 (A) >1 (-) 0 (-) >0.05
rs1288339 chr1:53628562 SLC1A7 [+20273bp] C - 13 T vs. C 0.108 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs1295454 chr1:53627718 SLC1A7 [+19429bp] C - 13 T vs. C 0.108 (C) 0.042 (C) <1 (-) 0 (-) >0.05
rs1288346 chr1:53622016 SLC1A7 [+13727bp] C - 13 T vs. C 0.108 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs1288349 chr1:53623664 SLC1A7 [+15375bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1288352 chr1:53624435 SLC1A7 [+16146bp] C - 13 T vs. C 0.108 (C) - <1 (-) 0 (-) >0.05
rs1288351 chr1:53624338 SLC1A7 [+16049bp] C - 13 A vs. G 0.108 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs35959571 chr1:53625090 SLC1A7 [+16801bp] C - 13 C vs. G 0.108 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs35658259 chr1:53628789 SLC1A7 [+20500bp] C - 13 A vs. T 0.108 (A) - >1 (-) 0 (-) >0.05
rs71654987 chr1:53612165 SLC1A7 [+3876bp] C - 13 A vs. G 0.108 (A) 0.042 (A) >1 (-) 0 (-) >0.05
rs1288342 chr1:53619319 SLC1A7 [+11030bp] C - 13 A vs. T 0.108 (T) - <1 (-) 0 (-) >0.05
rs12746080 chr1:53633492 SLC1A7 [+25203bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs1799821 chr1:53676448 CPT2 C - 12 A vs. G 0.45 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs1288341 chr1:53625839 SLC1A7 [+17550bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs12140961 chr1:53631029 SLC1A7 [+22740bp] C - 13 A vs. G 0.408 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs12038500 chr1:53627986 SLC1A7 [+19697bp] C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs1298238 chr1:53633248 SLC1A7 [+24959bp] C - 13 A vs. G 0.375 (G) 0.275 (G) <1 (-) 0 (-) >0.05
rs6668221 chr1:53649516 CPT2 [-12585bp] C - 9 A vs. G 0.017 (G) 0.058 (G) <1 (-) 37 (-) >0.05
rs77565483 chr1:53679057 CPT2 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs17785388 chr1:53709447 LRP8 [-1770bp] C - 3 A vs. T 0.017 (A) - >1 (-) 35 (-) >0.05
rs12119155 chr1:53626467 SLC1A7 [+18178bp] C - 13 T vs. C 0.475 (T) 0.467 (C) <1 (-) 0 (-) >0.05
rs115076220 chr1:53640300 CPT2 [-21801bp] C - 7 A vs. G 0.025 (A) - <1 (-) 0 (-) >0.05
rs144145830 chr1:53624083 SLC1A7 [+15794bp] C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs115643337 chr1:53623911 SLC1A7 [+15622bp] C - 13 T vs. C 0.042 (C) - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.