CPT2, chr1:53662101-53679869 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs79901635 chr1:53639682 CPT2 [-22419bp] C - 9 T vs. C 0.025 (T) - >1 (-) 0 (-) <1.00e-04

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6671485 chr1:53700108 MAGOH C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs61769584 chr1:53646696 CPT2 [-15405bp] C - 11 A vs. T 0.017 (A) 0.025 (A) >1 (-) 49 (-) >0.05
rs17192655 chr1:53699129 MAGOH C - 13 C vs. G 0.15 (C) - >1 (-) 0 (-) >0.05
rs55997677 chr1:53627373 SLC1A7 [+19084bp] C - 13 A vs. G 0.158 (A) - <1 (-) 0 (-) >0.05
rs6663121 chr1:53687589 C1orf123 [+1300bp] C - 13 T vs. C 0.483 (C) 0.167 (T) >1 (-) 1 (-) >0.05
rs61565555 chr1:53652786 CPT2 [-9315bp] C - 11 T vs. C 0.017 (C) 0.483 (C) <1 (-) 14 (-) >0.05
rs57390406 chr1:53658039 CPT2 [-4062bp] C - 13 A vs. G 0.117 (G) 0.208 (G) <1 (-) 20 (-) >0.05
rs13376279 chr1:53645754 CPT2 [-16347bp] C - 12 T vs. C - 0.025 (C) <1 (-) 45 (-) >0.05
rs117898727 chr1:53620993 SLC1A7 [+12704bp] C - 6 T vs. C - 0.292 (T) <1 (-) 61 (-) >0.05
rs6672178 chr1:53629849 SLC1A7 [+21560bp] C - 13 T vs. C 0.433 (T) 0.375 (C) >1 (-) 0 (-) >0.05
rs75854125 chr1:53715795 LRP8 C - 12 T vs. C - 0.2 (C) <1 (-) 46 (-) >0.05
rs55691495 chr1:53624849 SLC1A7 [+16560bp] C - 12 C vs. G 0.167 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs6692772 chr1:53629190 SLC1A7 [+20901bp] C - 13 A vs. G 0.417 (A) 0.358 (G) >1 (-) 0 (-) >0.05
rs6695567 chr1:53629585 SLC1A7 [+21296bp] C - 13 A vs. G 0.433 (A) 0.375 (G) >1 (-) 0 (-) >0.05
rs6670999 chr1:53693090 MAGOH C - 13 T vs. G 0.367 (T) 0.483 (T) <1 (-) 0 (-) >0.05
rs148191370 chr1:53717575 LRP8 C - 12 A vs. G - - <1 (-) 46 (-) >0.05
rs6672276 chr1:53629901 SLC1A7 [+21612bp] C - 13 A vs. C 0.433 (A) - >1 (-) 0 (-) >0.05
rs61769615 chr1:53691287 MAGOH [-1277bp] C - 12 C vs. G - - >1 (-) 52 (-) >0.05
rs2297656 chr1:53701581 MAGOH C - 13 A vs. G 0.375 (G) 0.483 (A) >1 (-) 0 (-) >0.05
rs6588469 chr1:53630705 SLC1A7 [+22416bp] C - 13 T vs. C 0.408 (T) 0.375 (C) >1 (-) 0 (-) >0.05
rs6588468 chr1:53630648 SLC1A7 [+22359bp] C - 13 A vs. G 0.425 (G) 0.375 (A) <1 (-) 0 (-) >0.05
rs55655352 chr1:53633554 SLC1A7 [+25265bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs72670894 chr1:53628121 SLC1A7 [+19832bp] C - 13 T vs. C 0.167 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs12136837 chr1:53692488 MAGOH [-76bp] C - 13 A vs. G 0.358 (G) 0.458 (G) >1 (-) 0 (-) >0.05
rs56232741 chr1:53628247 SLC1A7 [+19958bp] C - 13 C vs. G 0.167 (C) 0.333 (C) <1 (-) 0 (-) >0.05
rs12133464 chr1:53692437 MAGOH [-127bp] C - 13 A vs. T 0.358 (A) 0.425 (A) <1 (-) 0 (-) >0.05
rs56048633 chr1:53627785 SLC1A7 [+19496bp] C - 13 T vs. G - - >1 (-) 0 (-) >0.05
rs12135400 chr1:53693930 MAGOH C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs61769586 chr1:53649822 CPT2 [-12279bp] C - 11 T vs. C - - <1 (-) 49 (-) >0.05
rs147286884 chr1:53657383 CPT2 [-4718bp] C - 11 A vs. C - - <1 (-) 52 (-) >0.05
rs12145535 chr1:53693831 MAGOH C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs4500254 chr1:53633353 SLC1A7 [+25064bp] C - 13 A vs. G - - <1 (-) 2 (-) >0.05
rs77324108 chr1:53720211 LRP8 C - 3 T vs. C - 0.2 (C) >1 (-) 0 (-) >0.05
rs2297661 chr1:53723965 LRP8 C - 3 C vs. G - 0.208 (G) >1 (-) 0 (-) >0.05
rs12565998 chr1:53618312 SLC1A7 [+10023bp] C - 13 A vs. G 0.167 (G) 0.333 (G) >1 (-) 0 (-) >0.05
rs58754156 chr1:53618037 SLC1A7 [+9748bp] C - 13 A vs. C 0.167 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs2275087 chr1:53694388 MAGOH C - 13 T vs. C 0.358 (C) 0.458 (C) >1 (-) 0 (-) >0.05
rs10788949 chr1:53696051 MAGOH C - 13 T vs. C 0.358 (T) 0.458 (T) <1 (-) 0 (-) >0.05
rs2185292 chr1:53624489 SLC1A7 [+16200bp] C - 13 C vs. G 0.167 (G) 0.308 (G) >1 (-) 0 (-) >0.05
rs11206118 chr1:53616952 SLC1A7 [+8663bp] C - 13 T vs. C - - <1 (-) 23 (-) >0.05
rs12116608 chr1:53694065 MAGOH C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs72673135 chr1:53703072 MAGOH C - 13 A vs. C - 0.467 (A) >1 (-) 0 (-) >0.05
rs61769589 chr1:53652967 CPT2 [-9134bp] C - 12 A vs. G - 0.017 (A) <1 (-) 47 (-) >0.05
rs80332673 chr1:53677119 CPT2 C - 12 A vs. C 0.017 (C) 0.033 (C) >1 (-) 47 (-) >0.05
rs17785370 chr1:53705174 MAGOH [+892bp] C - 13 A vs. T 0.358 (T) 0.058 (T) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.