CSNK1G2, chr19:1941188-1981337 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1610104 chr19:1914048 SCAMP4 C - 11 T vs. G 0.167 (G) 0.125 (G) >1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1610104 chr19:1914048 SCAMP4 C - 11 T vs. G 0.167 (G) 0.125 (G) >1 (-) 30 (-) <0.05
rs4807168 chr19:1920289 SCAMP4 C - 11 A vs. G 0.125 (A) 0.142 (A) <1 (-) 41 (-) <0.05
rs10853957 chr19:1915118 SCAMP4 C - 11 A vs. C 0.125 (A) 0.133 (A) <1 (-) 35 (-) <0.05
rs10410479 chr19:1917925 SCAMP4 C - 11 T vs. C 0.133 (T) 0.133 (T) <1 (-) 36 (-) <0.05
rs4807167 chr19:1916889 SCAMP4 C - 11 T vs. C 0.133 (T) 0.117 (T) <1 (-) 35 (-) <0.05
rs12610631 chr19:1914535 SCAMP4 C - 11 T vs. G 0.125 (T) 0.133 (T) <1 (-) 37 (-) <0.05
rs11084918 chr19:1914940 SCAMP4 C - 11 A vs. G 0.125 (A) 0.133 (A) <1 (-) 37 (-) <0.05
rs10415845 chr19:1918023 SCAMP4 C - 11 T vs. C 0.15 (T) 0.133 (T) <1 (-) 36 (-) <0.05
rs10404636 chr19:1983860 BTBD2 [-1587bp] All: C 103,235 14 T vs. C - - 0.95 (0.91-0.99) 0 (0-36) 0.008
rs35870594 chr19:1912817 SCAMP4 C - 11 T vs. C 0.108 (T) 0.142 (T) <1 (-) 3 (-) <0.05
rs35504210 chr19:1910891 SCAMP4 C - 11 T vs. C 0.075 (T) 0.142 (T) <1 (-) 2 (-) <0.05
rs34062947 chr19:1911138 SCAMP4 C - 11 T vs. C - - >1 (-) 3 (-) <0.05
rs36094065 chr19:1909956 SCAMP4 C - 11 T vs. C 0.075 (T) 0.125 (T) <1 (-) 2 (-) <0.05
rs35795836 chr19:1901581 SCAMP4 [-3632bp] C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs12971714 chr19:1910282 SCAMP4 C - 11 C vs. G 0.075 (C) 0.15 (C) <1 (-) 3 (-) <0.05
rs35608810 chr19:1908814 SCAMP4 C - 11 A vs. C 0.075 (A) 0.142 (A) <1 (-) 2 (-) <0.05
rs12974606 chr19:1905405 SCAMP4 C - 11 T vs. G 0.042 (T) 0.15 (T) <1 (-) 0 (-) <0.05
rs12977411 chr19:1907015 SCAMP4 C - 11 T vs. C - - <1 (-) 2 (-) <0.05
rs7255330 chr19:1900547 SCAMP4 [-4666bp] C - 11 T vs. C - - <1 (-) 0 (-) <0.05
rs35684719 chr19:1901649 SCAMP4 [-3564bp] C - 11 T vs. C 0.083 (T) 0.117 (T) <1 (-) 0 (-) <0.05
rs12984847 chr19:1901053 SCAMP4 [-4160bp] C - 11 C vs. G 0.058 (C) 0.075 (C) <1 (-) 0 (-) <0.05
rs79235473 chr19:1906562 SCAMP4 C - 11 A vs. G 0.033 (A) 0.108 (A) <1 (-) 2 (-) <0.05
rs4807191 chr19:1990309 BTBD2 All: C 103,235 14 C vs. T 0.45 (C) 0.217 (T) 1.04 (1.01-1.08) 0 (0-41) 0.023
rs7251601 chr19:1906915 SCAMP4 C - 11 A vs. G - - <1 (-) 23 (-) <0.05
rs2396361 chr19:1915372 SCAMP4 C - 12 T vs. G 0.267 (G) 0.45 (G) >1 (-) 32 (-) <0.05
rs139781960 chr19:1985564 BTBD2 C - 5 T vs. C - - >1 (-) 0 (-) <0.05
rs3746063 chr19:1985912 BTBD2 C - 5 A vs. G - - >1 (-) 0 (-) <0.05
rs11666645 chr19:1914795 SCAMP4 C - 12 T vs. C 0.267 (C) 0.417 (C) >1 (-) 34 (-) >0.05
rs8110770 chr19:1913685 SCAMP4 C - 11 C vs. G 0.083 (C) 0.425 (C) <1 (-) 0 (-) >0.05
rs4807189 chr19:1976640 CSNK1G2 All: C 103,235 14 C vs. A 0.45 (C) 0.292 (A) 1.04 (1.00-1.08) 0 (0-48) 0.057
rs56212356 chr19:1914465 SCAMP4 C - 12 T vs. C 0.283 (C) 0.417 (C) >1 (-) 35 (-) >0.05
rs34279249 chr19:1899402 SCAMP4 [-5811bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs4806819 chr19:1917127 SCAMP4 C - 12 T vs. C 0.275 (C) - >1 (-) 33 (-) >0.05
rs57687454 chr19:2010999 BTBD2 C - 10 A vs. G 0.242 (A) 0.333 (A) >1 (-) 0 (-) >0.05
rs11671144 chr19:1918645 SCAMP4 C - 12 T vs. C - - >1 (-) 33 (-) >0.05
rs12461737 chr19:1988444 BTBD2 C - 12 T vs. C 0.308 (T) 0.475 (C) >1 (-) 0 (-) >0.05
rs62127735 chr19:1909523 SCAMP4 C - 8 T vs. C 0.1 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs11084917 chr19:1898770 SCAMP4 [-6443bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs3746061 chr19:1985398 BTBD2 [-49bp] C - 6 T vs. C - - >1 (-) 0 (-) >0.05
rs12984886 chr19:2010570 BTBD2 C - 10 A vs. G 0.192 (A) - >1 (-) 0 (-) >0.05
rs12977334 chr19:1946265 CSNK1G2 C - 12 A vs. G 0.233 (G) - <1 (-) 0 (-) >0.05
rs11880015 chr19:1951760 CSNK1G2 C - 7 A vs. C - - >1 (-) 30 (-) >0.05
rs45520232 chr19:1991564 BTBD2 C - 4 C vs. G - 0.033 (C) <1 (-) 0 (-) >0.05
rs7254820 chr19:1986455 BTBD2 C - 12 A vs. G 0.3 (G) 0.458 (A) <1 (-) 17 (-) >0.05
rs56187939 chr19:1970668 CSNK1G2 C - 12 A vs. G 0.333 (G) 0.483 (A) <1 (-) 0 (-) >0.05
rs61172288 chr19:1938128 CSNK1G2 [-3060bp] C - 12 A vs. C 0.375 (C) 0.492 (A) <1 (-) 0 (-) >0.05
rs77228745 chr19:1989657 BTBD2 C - 5 T vs. C - 0.025 (C) >1 (-) 0 (-) >0.05
rs74332272 chr19:1972537 CSNK1G2 C - 8 A vs. G - 0.025 (A) >1 (-) 0 (-) >0.05
rs35174257 chr19:2013303 BTBD2 C - 10 A vs. G 0.175 (A) - >1 (-) 0 (-) >0.05
rs4807185 chr19:1973732 CSNK1G2 C - 8 A vs. G - 0.025 (A) >1 (-) 0 (-) >0.05

Association studies for this region [+]