CSNK1G2, chr19:1941188-1981337 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1610104 chr19:1914048 SCAMP4 C - 11 T vs. G 0.167 (G) 0.125 (G) >1 (-) 30 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs151177028 chr19:1898783 SCAMP4 [-6430bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs11550450 chr19:1979386 CSNK1G2 C - 12 T vs. C 0.125 (T) 0.108 (T) >1 (-) 12 (-) >0.05
rs12977902 chr19:1988587 BTBD2 C - 12 A vs. G - - >1 (-) 15 (-) >0.05
rs10405740 chr19:1988092 BTBD2 C - 12 A vs. G 0.133 (A) 0.133 (A) >1 (-) 14 (-) >0.05
rs9749188 chr19:1909717 SCAMP4 C - 3 A vs. G 0.2 (G) 0.392 (G) >1 (-) 0 (-) >0.05
rs11883323 chr19:1959126 CSNK1G2 C - 12 A vs. G 0.092 (G) 0.167 (G) >1 (-) 27 (-) >0.05
rs138234082 chr19:1936652 CSNK1G2 [-4536bp] C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs73522924 chr19:1958006 CSNK1G2 C - 12 A vs. G 0.092 (A) 0.183 (A) <1 (-) 27 (-) >0.05
rs10424273 chr19:1913533 SCAMP4 C - 12 A vs. G 0.133 (A) 0.25 (A) >1 (-) 28 (-) >0.05
rs76072286 chr19:1936710 CSNK1G2 [-4478bp] C - 7 C vs. G 0.033 (C) - <1 (-) 28 (-) >0.05
rs113813142 chr19:1911154 SCAMP4 C - 12 A vs. G - - >1 (-) 27 (-) >0.05
rs7257116 chr19:2028985 BTBD2 C - 11 T vs. C 0.3 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs8102973 chr19:1909585 SCAMP4 C - 12 A vs. G - - <1 (-) 32 (-) >0.05
rs7248579 chr19:1910360 SCAMP4 C - 12 T vs. C 0.133 (C) 0.283 (C) <1 (-) 28 (-) >0.05
rs76159002 chr19:1912986 SCAMP4 C - 12 T vs. C 0.133 (T) 0.242 (T) >1 (-) 27 (-) >0.05
rs7260336 chr19:1910106 SCAMP4 C - 12 A vs. C 0.133 (C) 0.275 (C) <1 (-) 27 (-) >0.05
rs118123392 chr19:2030993 BTBD2 C - 11 A vs. G 0.008 (A) - <1 (-) 0 (-) >0.05
rs148541543 chr19:2030254 BTBD2 C - 11 A vs. C - - <1 (-) 0 (-) >0.05
rs6510630 chr19:1927523 SCAMP4 [+1507bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs7246158 chr19:1926641 SCAMP4 [+625bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs117450701 chr19:1952812 CSNK1G2 C - 4 A vs. G - 0.075 (G) <1 (-) 32 (-) >0.05
rs12974812 chr19:1934363 CSNK1G2 [-6825bp] C - 12 T vs. G 0.442 (T) 0.375 (G) >1 (-) 0 (-) >0.05
rs8109669 chr19:1916450 SCAMP4 C - 12 A vs. G 0.133 (G) 0.258 (G) <1 (-) 28 (-) >0.05
rs4807169 chr19:1920342 SCAMP4 C - 10 T vs. C 0.492 (T) 0.183 (T) >1 (-) 30 (-) >0.05
rs6510629 chr19:1925389 SCAMP4 C - 12 A vs. G 0.275 (A) 0.483 (A) >1 (-) 0 (-) >0.05
rs8109179 chr19:1916392 SCAMP4 C - 12 T vs. C 0.133 (T) 0.25 (T) >1 (-) 29 (-) >0.05
rs1968092 chr19:1984067 BTBD2 [-1380bp] C - 12 T vs. C - - >1 (-) 13 (-) >0.05
rs8109279 chr19:1916427 SCAMP4 C - 12 T vs. C 0.142 (T) 0.25 (T) >1 (-) 29 (-) >0.05
rs1061828 chr19:1925970 SCAMP4 C - 12 T vs. C 0.308 (C) 0.483 (T) <1 (-) 0 (-) >0.05
rs72979694 chr19:2023656 BTBD2 C - 11 T vs. C 0.1 (T) 0.125 (T) <1 (-) 0 (-) >0.05
rs4807162 chr19:1897582 SCAMP4 [-7631bp] C - 10 A vs. G - 0.342 (A) >1 (-) 0 (-) >0.05
rs6510631 chr19:1927763 SCAMP4 [+1747bp] C - 12 T vs. G 0.3 (T) 0.5 (T) >1 (-) 0 (-) >0.05
rs7249308 chr19:2027846 BTBD2 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs74375697 chr19:2021252 BTBD2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs80177012 chr19:2023295 BTBD2 C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs62129535 chr19:2025383 BTBD2 C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs74432830 chr19:2022757 BTBD2 C - 11 A vs. C 0.108 (C) - >1 (-) 0 (-) >0.05
rs8102506 chr19:1990825 BTBD2 C - 12 A vs. G 0.125 (A) 0.192 (A) >1 (-) 13 (-) >0.05
rs142991176 chr19:1915631 SCAMP4 C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs12981078 chr19:1988769 BTBD2 C - 12 A vs. G - - >1 (-) 10 (-) >0.05
rs12975030 chr19:2021212 BTBD2 C - 10 A vs. C - - >1 (-) 0 (-) >0.05
rs3810413 chr19:1993509 BTBD2 C - 11 T vs. C 0.108 (C) 0.258 (C) <1 (-) 0 (-) >0.05
rs35021992 chr19:1901082 SCAMP4 [-4131bp] C - 12 T vs. C - - >1 (-) 4 (-) >0.05
rs4807171 chr19:1926252 SCAMP4 [+236bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs139609787 chr19:1928940 SCAMP4 [+2924bp] C - 10 T vs. C - - <1 (-) 0 (-) >0.05
rs8730 chr19:1925942 SCAMP4 C - 11 T vs. C 0.392 (C) 0.375 (T) >1 (-) 0 (-) >0.05
rs3810415 chr19:1924653 SCAMP4 C - 12 A vs. C 0.425 (C) 0.367 (A) <1 (-) 15 (-) >0.05
rs7259772 chr19:1926483 SCAMP4 [+467bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs12981528 chr19:2021251 BTBD2 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs6510636 chr19:2021909 BTBD2 C - 11 A vs. G 0.233 (A) 0.058 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]