ECHDC2, chr1:53361656-53392884 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242318 chr1:53414089 SCP2 C - 12 A vs. G - - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242318 chr1:53414089 SCP2 C - 12 A vs. G - - >1 (-) 7 (-) <0.05
rs1242327 chr1:53399073 SCP2 C - 12 A vs. G 0.108 (A) 0.008 (A) >1 (-) 5 (-) <0.05
rs537822 chr1:53342954 ZYG11A C - 13 T vs. C 0.108 (C) 0.175 (C) <1 (-) 0 (-) <0.05
rs10788945 chr1:53323492 ZYG11A C - 13 A vs. C 0.092 (C) 0.133 (C) <1 (-) 14 (-) <0.05
rs112456632 chr1:53312964 ZYG11A C - 9 T vs. C - - >1 (-) 0 (-) <0.05
rs111252162 chr1:53340832 ZYG11A C - 9 A vs. G - - <1 (-) 0 (-) <0.05
rs6687326 chr1:53438773 SCP2 C - 7 A vs. G - - >1 (-) 0 (-) <0.05
rs116429142 chr1:53405481 SCP2 C - 3 A vs. G 0.042 (G) - <1 (-) 0 (-) <0.05
rs7524175 chr1:53320485 ZYG11A C - 11 C vs. G - - <1 (-) 0 (-) <0.05
rs138850299 chr1:53323958 ZYG11A C - 11 A vs. C - - >1 (-) 0 (-) <0.05
rs61744306 chr1:53326421 ZYG11A C - 11 A vs. G - - <1 (-) 0 (-) <0.05
rs141473055 chr1:53327244 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs147556638 chr1:53329153 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs147862590 chr1:53329908 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) <0.05
rs78829384 chr1:53352035 ZYG11A C - 5 T vs. C - - <1 (-) 30 (-) <0.05
rs147177369 chr1:53332430 ZYG11A C - 11 T vs. G - - >1 (-) 0 (-) >0.05
rs116779030 chr1:53344103 ZYG11A C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs76822490 chr1:53344826 ZYG11A C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs60442198 chr1:53315940 ZYG11A C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs79250149 chr1:53315814 ZYG11A C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs112013548 chr1:53345847 ZYG11A C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs113977177 chr1:53337238 ZYG11A C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs112213522 chr1:53316861 ZYG11A C - 9 A vs. C - - <1 (-) 0 (-) >0.05
rs150175951 chr1:53351644 ZYG11A C - 7 T vs. G - - >1 (-) 0 (-) >0.05
rs11206043 chr1:53402552 SCP2 C - 12 T vs. C 0.3 (C) 0.267 (T) <1 (-) 1 (-) >0.05
rs1242331 chr1:53392908 SCP2 C - 13 A vs. G 0.292 (A) - >1 (-) 0 (-) >0.05
rs150403579 chr1:53426709 SCP2 C - 5 C vs. G - - >1 (-) 0 (-) >0.05
rs12405280 chr1:53423528 SCP2 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs56222568 chr1:53432786 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs7548389 chr1:53404211 SCP2 C - 13 T vs. C 0.35 (C) 0.042 (T) <1 (-) 0 (-) >0.05
rs1775540 chr1:53407893 SCP2 C - 13 A vs. C 0.3 (C) 0.267 (A) <1 (-) 0 (-) >0.05
rs485128 chr1:53344583 ZYG11A C - 13 T vs. C 0.317 (T) 0.042 (C) >1 (-) 0 (-) >0.05
rs897732 chr1:53382816 ECHDC2 C - 13 A vs. C 0.317 (A) 0.233 (C) >1 (-) 0 (-) >0.05
rs1242201 chr1:53344748 ZYG11A C - 13 A vs. G 0.325 (G) 0.042 (A) <1 (-) 0 (-) >0.05
rs111813961 chr1:53349906 ZYG11A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs506527 chr1:53350683 ZYG11A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs550561 chr1:53375134 ECHDC2 C - 13 T vs. C 0.308 (C) 0.275 (T) <1 (-) 0 (-) >0.05
rs1242198 chr1:53352016 ZYG11A C - 13 A vs. G 0.317 (G) 0.025 (A) <1 (-) 0 (-) >0.05
rs562641 chr1:53374666 ECHDC2 C - 13 T vs. C 0.308 (C) 0.267 (T) <1 (-) 0 (-) >0.05
rs7552139 chr1:53387379 ECHDC2 C - 13 C vs. G 0.342 (G) - <1 (-) 0 (-) >0.05
rs143730488 chr1:53425285 SCP2 C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs1242314 chr1:53417544 SCP2 C - 13 A vs. G - 0.258 (G) >1 (-) 0 (-) >0.05
rs522259 chr1:53365481 ECHDC2 C - 13 A vs. G 0.3 (A) 0.258 (G) >1 (-) 0 (-) >0.05
rs576891 chr1:53364976 ECHDC2 C - 13 A vs. G 0.3 (A) 0.267 (G) >1 (-) 0 (-) >0.05
rs576650 chr1:53327207 ZYG11A C - 13 T vs. C 0.308 (C) 0.025 (T) <1 (-) 0 (-) >0.05
rs511599 chr1:53362818 ECHDC2 C - 13 T vs. C 0.3 (T) 0.267 (C) >1 (-) 0 (-) >0.05
rs520281 chr1:53365235 ECHDC2 C - 13 C vs. G 0.292 (G) 0.267 (C) <1 (-) 0 (-) >0.05
rs143096092 chr1:53315502 ZYG11A C - 3 T vs. C - - <1 (-) 23 (-) >0.05
rs6588446 chr1:53425260 SCP2 C - 13 A vs. G 0.35 (A) 0.0 (G) >1 (-) 0 (-) >0.05
rs11585570 chr1:53438130 SCP2 C - 13 T vs. C 0.3 (C) 0.433 (C) <1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.