ECHDC2, chr1:53361656-53392884 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242318 chr1:53414089 SCP2 C - 12 A vs. G - - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs11580124 chr1:53328086 ZYG11A C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs12749112 chr1:53436563 SCP2 C - 4 T vs. C 0.058 (C) - <1 (-) 28 (-) >0.05
rs61771095 chr1:53335784 ZYG11A C - 13 T vs. G - - <1 (-) 9 (-) >0.05
rs74584959 chr1:53322069 ZYG11A C - 13 C vs. G 0.025 (C) - >1 (-) 0 (-) >0.05
rs59146030 chr1:53335451 ZYG11A C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs141877812 chr1:53435441 SCP2 C - 11 T vs. C - - >1 (-) 2 (-) >0.05
rs12031119 chr1:53356277 ZYG11A C - 11 T vs. C - 0.258 (C) >1 (-) 52 (-) >0.05
rs4504041 chr1:53335321 ZYG11A C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs11587812 chr1:53393511 SCP2 C - 13 A vs. G 0.025 (A) 0.025 (A) <1 (-) 0 (-) >0.05
rs515857 chr1:53336859 ZYG11A C - 12 T vs. C 0.342 (T) - >1 (-) 15 (-) >0.05
rs148782537 chr1:53440012 SCP2 C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs12568454 chr1:53442622 SCP2 C - 11 A vs. G - 0.1 (G) >1 (-) 1 (-) >0.05
rs2298145 chr1:53365104 ECHDC2 C - 13 A vs. G 0.017 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs113560470 chr1:53408496 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs112004311 chr1:53313536 ZYG11A C - 10 A vs. T - - >1 (-) 0 (-) >0.05
rs114641070 chr1:53432282 SCP2 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs116167803 chr1:53432280 SCP2 C - 13 A vs. G - - <1 (-) 0 (-) >0.05
rs138735805 chr1:53361116 ZYG11A [+446bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs28384398 chr1:53392597 ECHDC2 C - 13 T vs. G 0.025 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs79620985 chr1:53330242 ZYG11A C - 13 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs72899307 chr1:53428980 SCP2 C - 13 T vs. C 0.025 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs145902346 chr1:53381267 ECHDC2 C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs11206048 chr1:53412467 SCP2 C - 13 A vs. G 0.025 (G) 0.2 (G) <1 (-) 2 (-) >0.05
rs140581937 chr1:53371735 ECHDC2 C - 9 C vs. G - - <1 (-) 0 (-) >0.05
rs80064840 chr1:53344073 ZYG11A C - 13 A vs. G 0.025 (G) 0.217 (G) <1 (-) 0 (-) >0.05
rs6685819 chr1:53425720 SCP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs147673700 chr1:53325596 ZYG11A C - 13 A vs. C - - >1 (-) 0 (-) >0.05
rs13375034 chr1:53424307 SCP2 C - 13 T vs. C 0.025 (C) 0.208 (C) <1 (-) 0 (-) >0.05
rs12044957 chr1:53425155 SCP2 C - 10 T vs. C - 0.258 (T) <1 (-) 45 (-) >0.05
rs117828082 chr1:53349590 ZYG11A C - 13 A vs. C - 0.225 (A) >1 (-) 0 (-) >0.05
rs115033062 chr1:53430632 SCP2 C - 13 A vs. G 0.025 (A) 0.192 (A) >1 (-) 0 (-) >0.05
rs75287494 chr1:53350422 ZYG11A C - 13 T vs. G - 0.225 (T) >1 (-) 0 (-) >0.05
rs147517083 chr1:53340496 ZYG11A C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs112325050 chr1:53373365 ECHDC2 C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs76408882 chr1:53339245 ZYG11A C - 13 A vs. C 0.025 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs145619348 chr1:53374073 ECHDC2 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs75435337 chr1:53331123 ZYG11A C - 13 A vs. C 0.025 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs41294530 chr1:53442376 SCP2 C - 13 A vs. G 0.025 (G) 0.225 (G) <1 (-) 0 (-) >0.05
rs72899330 chr1:53441903 SCP2 C - 13 A vs. G 0.025 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs114247860 chr1:53333330 ZYG11A C - 13 A vs. C 0.025 (A) - >1 (-) 0 (-) >0.05
rs79762797 chr1:53333392 ZYG11A C - 13 T vs. C 0.025 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs74615171 chr1:53439126 SCP2 C - 13 A vs. G 0.017 (G) 0.192 (G) <1 (-) 0 (-) >0.05
rs78301041 chr1:53338902 ZYG11A C - 13 A vs. G 0.025 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs138379013 chr1:53436686 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs34189188 chr1:53439926 SCP2 C - 13 T vs. C 0.025 (T) 0.217 (T) >1 (-) 0 (-) >0.05
rs75634378 chr1:53438158 SCP2 C - 13 A vs. C 0.025 (A) 0.217 (A) >1 (-) 0 (-) >0.05
rs35121754 chr1:53439942 SCP2 C - 13 C vs. G 0.025 (G) 0.2 (G) <1 (-) 0 (-) >0.05
rs111589810 chr1:53359266 ZYG11A C - 13 A vs. G 0.025 (A) 0.175 (A) >1 (-) 0 (-) >0.05
rs147461964 chr1:53349739 ZYG11A C - 4 A vs. G - - >1 (-) 47 (-) >0.05
rs57097595 chr1:53315129 ZYG11A C - 13 T vs. C 0.025 (T) 0.217 (T) >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.