ECHDC2, chr1:53361656-53392884 +/- 50000 base pairs
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Most significant meta-analysis in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1242318 chr1:53414089 SCP2 C - 12 A vs. G - - >1 (-) 7 (-) <0.05

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs58523403 chr1:53434133 SCP2 C - 13 T vs. C 0.025 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs2298146 chr1:53371919 ECHDC2 C - 13 A vs. G 0.025 (A) 0.183 (A) >1 (-) 0 (-) >0.05
rs78339936 chr1:53345981 ZYG11A C - 4 T vs. C 0.017 (T) 0.083 (T) <1 (-) 61 (-) >0.05
rs141988944 chr1:53426251 SCP2 C - 13 T vs. G - - <1 (-) 0 (-) >0.05
rs77456695 chr1:53343996 ZYG11A C - 4 C vs. G 0.017 (C) 0.092 (C) <1 (-) 61 (-) >0.05
rs79840136 chr1:53439412 SCP2 C - 10 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs57619703 chr1:53433966 SCP2 C - 13 A vs. G 0.025 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs59677561 chr1:53433865 SCP2 C - 13 T vs. C 0.025 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs113269162 chr1:53433705 SCP2 C - 13 T vs. C 0.025 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs150018764 chr1:53433234 SCP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs78682257 chr1:53409094 SCP2 C - 9 T vs. C - - >1 (-) 19 (-) >0.05
rs111445656 chr1:53432727 SCP2 C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs72899310 chr1:53429003 SCP2 C - 13 T vs. C 0.025 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs6656430 chr1:53427701 SCP2 C - 13 A vs. G - 0.2 (G) <1 (-) 0 (-) >0.05
rs59838368 chr1:53428269 SCP2 C - 13 T vs. C 0.025 (C) 0.225 (C) <1 (-) 0 (-) >0.05
rs60809666 chr1:53428562 SCP2 C - 13 A vs. T 0.025 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs2275758 chr1:53377125 ECHDC2 C - 13 A vs. G 0.025 (A) 0.217 (A) >1 (-) 0 (-) >0.05
rs13373890 chr1:53417332 SCP2 C - 13 A vs. G 0.025 (A) 0.167 (A) >1 (-) 0 (-) >0.05
rs114120709 chr1:53421912 SCP2 C - 13 T vs. G 0.008 (T) 0.208 (T) >1 (-) 0 (-) >0.05
rs6666902 chr1:53409444 SCP2 C - 12 T vs. C - - >1 (-) 16 (-) >0.05
rs3820268 chr1:53380515 ECHDC2 C - 13 C vs. G 0.025 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs116927757 chr1:53416082 SCP2 C - 13 A vs. G - 0.158 (G) <1 (-) 0 (-) >0.05
rs114329901 chr1:53395909 SCP2 C - 12 A vs. G - - <1 (-) 17 (-) >0.05
rs74482100 chr1:53383320 ECHDC2 C - 13 T vs. C 0.025 (C) 0.183 (C) <1 (-) 0 (-) >0.05
rs115828273 chr1:53375516 ECHDC2 C - 12 A vs. G - - >1 (-) 16 (-) >0.05
rs143565785 chr1:53426200 SCP2 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs75794829 chr1:53423372 SCP2 C - 13 A vs. G 0.025 (G) - >1 (-) 0 (-) >0.05
chr1:53378967 chr1:53378967 ECHDC2 C - 4 A vs. G - - <1 (-) 60 (-) >0.05
rs144341764 chr1:53363700 ECHDC2 C - 12 A vs. G - - >1 (-) 16 (-) >0.05
rs12076197 chr1:53409573 SCP2 C - 7 C vs. G - - >1 (-) 28 (-) >0.05
rs145912198 chr1:53425637 SCP2 C - 13 T vs. C - - >1 (-) 0 (-) >0.05
rs146285200 chr1:53344529 ZYG11A C - 12 T vs. C - - <1 (-) 15 (-) >0.05
rs145695927 chr1:53439083 SCP2 C - 7 A vs. G - - >1 (-) 17 (-) >0.05
rs79906090 chr1:53396076 SCP2 C - 13 T vs. C - 0.217 (T) >1 (-) 0 (-) >0.05
rs61671409 chr1:53396324 SCP2 C - 13 A vs. G 0.025 (A) 0.225 (A) >1 (-) 0 (-) >0.05
rs61199247 chr1:53396558 SCP2 C - 13 T vs. C 0.025 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs17107484 chr1:53410388 SCP2 C - 13 A vs. G 0.025 (A) 0.2 (A) >1 (-) 0 (-) >0.05
rs76971537 chr1:53406768 SCP2 C - 13 T vs. C 0.025 (C) 0.233 (C) <1 (-) 0 (-) >0.05
rs60813156 chr1:53402536 SCP2 C - 13 A vs. C 0.025 (C) 0.217 (C) <1 (-) 0 (-) >0.05
rs74728094 chr1:53406738 SCP2 C - 13 T vs. C 0.025 (T) 0.225 (T) >1 (-) 0 (-) >0.05
rs115802509 chr1:53405698 SCP2 C - 13 T vs. C 0.025 (T) 0.217 (T) >1 (-) 0 (-) >0.05
rs11206054 chr1:53436385 SCP2 C - 6 C vs. G - - >1 (-) 13 (-) >0.05
rs11206049 chr1:53418252 SCP2 C - 9 T vs. G - - >1 (-) 0 (-) >0.05
rs146356871 chr1:53419189 SCP2 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs75591330 chr1:53313035 ZYG11A C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs148951197 chr1:53416703 SCP2 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs149105987 chr1:53409722 SCP2 C - 9 A vs. G - - >1 (-) 0 (-) >0.05
rs146681934 chr1:53409019 SCP2 C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs3753756 chr1:53380922 ECHDC2 C - 10 T vs. G - 0.292 (G) >1 (-) 38 (-) >0.05
rs111258468 chr1:53400625 SCP2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05

These results originate from GWAS-only meta-analyses for which no additional data can be shared publicly. See Methods for further details.