ELK4, chr1:205577071-205601090 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs868844 chr1:205646646 SLC45A3 All: C 108,990 15 G vs. A 0.308 (G) 0.442 (G) 0.92 (0.89-0.96) 28 (0-61) 1.25e-05
Meta_image?name=rs868844

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs868844 chr1:205646646 SLC45A3 All: C 108,990 15 G vs. A 0.308 (G) 0.442 (G) 0.92 (0.89-0.96) 28 (0-61) 1.25e-05
rs4951255 chr1:205645063 SLC45A3 All: C 108,990 15 A vs. C 0.308 (A) 0.442 (A) 0.92 (0.89-0.96) 28 (0-61) 1.31e-05
rs61824662 chr1:205649447 SLC45A3 All: C 108,990 15 G vs. A - 0.192 (A) 1.23 (1.11-1.35) 0 (0-50) 5.02e-05
rs11240551 chr1:205641826 SLC45A3 C - 13 C vs. G 0.333 (C) 0.45 (C) <1 (-) 35 (-) <0.05
rs1775153 chr1:205650271 SLC45A3 [+684bp] C - 13 T vs. G 0.133 (T) 0.367 (T) >1 (-) 17 (-) <0.05
rs1418549 chr1:205644848 SLC45A3 C - 13 C vs. G 0.058 (G) 0.367 (G) <1 (-) 50 (-) <0.05
rs4951254 chr1:205642390 SLC45A3 C - 13 T vs. C 0.067 (T) 0.367 (T) >1 (-) 51 (-) <0.05
rs2153904 chr1:205642790 SLC45A3 C - 13 T vs. G 0.042 (T) 0.367 (T) >1 (-) 58 (-) <0.05
rs12024592 chr1:205598410 ELK4 C - 13 T vs. C - 0.35 (C) >1 (-) 0 (-) <0.05
rs146088191 chr1:205603775 ELK4 [+2685bp] C - 3 T vs. C - - <1 (-) 3 (-) <0.05
rs7555776 chr1:205626332 SLC45A3 [-647bp] C - 12 A vs. G 0.058 (A) - >1 (-) 0 (-) <0.05
rs61824660 chr1:205643365 SLC45A3 C - 13 T vs. C 0.4 (C) - >1 (-) 0 (-) <0.05
rs871454 chr1:205635948 SLC45A3 C - 13 A vs. G - - <1 (-) 11 (-) <0.05
rs10494871 chr1:205552864 MFSD4 C - 13 A vs. G 0.083 (A) 0.167 (A) <1 (-) 14 (-) <0.05
rs116344772 chr1:205564482 MFSD4 C - 13 A vs. G 0.008 (A) - >1 (-) 3 (-) <0.05
rs11581303 chr1:205608153 ELK4 [+7063bp] C - 13 A vs. G 0.3 (G) 0.383 (G) >1 (-) 0 (-) <0.05
rs12746159 chr1:205609672 ELK4 [+8582bp] C - 13 C vs. G 0.283 (G) 0.375 (G) >1 (-) 3 (-) <0.05
rs6656684 chr1:205575055 ELK4 [-2016bp] C - 13 T vs. C - - <1 (-) 7 (-) <0.05
rs7518313 chr1:205606850 ELK4 [+5760bp] C - 13 T vs. C 0.3 (T) 0.375 (T) <1 (-) 0 (-) <0.05
rs11577251 chr1:205590152 ELK4 C - 13 A vs. G - - >1 (-) 0 (-) <0.05
rs12410695 chr1:205623139 SLC45A3 [-3840bp] C - 13 T vs. C - - <1 (-) 0 (-) >0.05
rs16856106 chr1:205631058 SLC45A3 C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs34888532 chr1:205625569 SLC45A3 [-1410bp] C - 13 T vs. C 0.033 (C) 0.325 (C) >1 (-) 0 (-) >0.05
rs6668187 chr1:205575535 ELK4 [-1536bp] C - 13 A vs. G - - >1 (-) 0 (-) >0.05
rs3902968 chr1:205639045 SLC45A3 C - 13 A vs. G 0.342 (G) 0.267 (A) >1 (-) 0 (-) >0.05
rs36059081 chr1:205624985 SLC45A3 [-1994bp] C - 13 C vs. G 0.033 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs12036666 chr1:205618659 SLC45A3 [-8320bp] C - 13 A vs. G - 0.25 (A) <1 (-) 0 (-) >0.05
rs4951251 chr1:205617852 SLC45A3 [-9127bp] C - 13 T vs. C 0.033 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs3795550 chr1:205563162 MFSD4 C - 12 T vs. C 0.2 (C) 0.308 (T) >1 (-) 50 (-) >0.05
rs12744379 chr1:205612080 ELK4 [+10990bp] C - 13 T vs. G 0.033 (G) 0.325 (G) >1 (-) 0 (-) >0.05
rs11580704 chr1:205606982 ELK4 [+5892bp] C - 13 T vs. G 0.333 (T) - >1 (-) 11 (-) >0.05
rs11590243 chr1:205586249 ELK4 C - 10 C vs. G 0.058 (C) - >1 (-) 0 (-) >0.05
rs13757 chr1:205601199 ELK4 [+109bp] C - 13 A vs. G 0.342 (A) - >1 (-) 0 (-) >0.05
rs145880670 chr1:205632610 SLC45A3 C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs76744374 chr1:205624756 SLC45A3 [-2223bp] C - 13 A vs. G 0.158 (A) - <1 (-) 10 (-) >0.05
rs1114126 chr1:205606172 ELK4 [+5082bp] C - 13 A vs. G 0.158 (G) 0.467 (G) >1 (-) 0 (-) >0.05
rs12039255 chr1:205609010 ELK4 [+7920bp] C - 13 T vs. C 0.033 (T) 0.325 (T) <1 (-) 0 (-) >0.05
rs60890169 chr1:205612646 ELK4 [+11556bp] C - 13 T vs. C 0.325 (T) - >1 (-) 6 (-) >0.05
rs111519240 chr1:205620884 SLC45A3 [-6095bp] C - 13 A vs. G - - <1 (-) 15 (-) >0.05
rs111942467 chr1:205620895 SLC45A3 [-6084bp] C - 13 A vs. G - - <1 (-) 16 (-) >0.05
rs72750910 chr1:205598912 ELK4 C - 13 T vs. C 0.258 (C) - <1 (-) 0 (-) >0.05
rs139936227 chr1:205536643 RNU2-19P [+716bp] C - 11 A vs. G - - <1 (-) 9 (-) >0.05
rs35504176 chr1:205626904 SLC45A3 [-75bp] C - 13 A vs. G 0.033 (A) 0.325 (A) <1 (-) 0 (-) >0.05
rs34244565 chr1:205626995 SLC45A3 C - 13 C vs. G 0.033 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs1064406 chr1:205589574 ELK4 C - 13 T vs. C 0.025 (T) 0.333 (T) <1 (-) 0 (-) >0.05
rs7526132 chr1:205554085 MFSD4 C - 13 C vs. G 0.425 (C) 0.05 (C) >1 (-) 0 (-) >0.05
rs151174597 chr1:205637908 SLC45A3 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs6593957 chr1:205600653 ELK4 C - 13 T vs. C - - >1 (-) 38 (-) >0.05
rs2185811 chr1:205596870 ELK4 C - 13 T vs. C 0.025 (C) 0.333 (C) >1 (-) 0 (-) >0.05
rs34193126 chr1:205596327 ELK4 C - 13 T vs. C 0.025 (C) 0.325 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]