FAM47E, chr4:77135193-77204933 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6812193 chr4:77198986 FAM47E All: C 120,238 21 T vs. C 0.392 (T) 0.092 (T) 0.91 (0.88-0.93) 36 (0-62) 1.85e-11
Meta_image?name=rs6812193

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs71607346 chr4:77180145 FAM47E All: C 108,990 15 C vs. T 0.075 (C) 0.442 (C) 1.13 (1.07-1.19) 9 (0-46) 4.51e-06
rs13122345 chr4:77179898 FAM47E All: C 108,990 15 T vs. C 0.075 (T) 0.442 (T) 1.13 (1.07-1.19) 8 (0-44) 4.57e-06
rs6851219 chr4:77179830 FAM47E All: C 108,990 15 T vs. C 0.075 (T) 0.442 (T) 1.13 (1.07-1.19) 8 (0-44) 4.59e-06
rs11547135 chr4:77134786 SCARB2 All: C 108,990 15 T vs. C 0.342 (T) 0.35 (C) 1.08 (1.05-1.12) 2 (0-54) 4.62e-06
rs2869871 chr4:77190733 FAM47E All: C 108,990 15 T vs. C - - 0.93 (0.90-0.96) 29 (0-62) 4.71e-06
rs1441909 chr4:77193136 FAM47E All: C 107,386 14 G vs. A 0.408 (G) 0.458 (G) 1.08 (1.04-1.11) 25 (0-60) 5.37e-06
rs6817492 chr4:77152235 FAM47E All: C 102,085 14 A vs. C 0.175 (A) 0.483 (A) 1.10 (1.06-1.15) 0 (0-51) 6.17e-06
rs72655583 chr4:77193228 FAM47E All: C 108,990 15 C vs. T 0.067 (C) - 0.88 (0.83-0.93) 1 (0-54) 6.92e-06
rs4859635 chr4:77151203 FAM47E All: C 108,990 15 C vs. T 0.175 (C) 0.483 (C) 1.09 (1.05-1.14) 0 (0-50) 6.99e-06
rs1948997 chr4:77150723 FAM47E All: C 108,990 15 T vs. C 0.175 (T) 0.483 (T) 1.09 (1.05-1.14) 0 (0-49) 7.16e-06
rs7666265 chr4:77176281 FAM47E C - 13 A vs. G 0.167 (A) 0.2 (G) >1 (-) 6 (-) <1.00e-04
rs62300773 chr4:77164792 FAM47E All: C 108,990 15 T vs. G 0.333 (T) 0.042 (G) 1.08 (1.04-1.11) 0 (0-49) 7.73e-06
rs12640185 chr4:77132360 SCARB2 All: C 108,990 15 C vs. T 0.392 (C) 0.008 (T) 1.08 (1.04-1.11) 0 (0-44) 8.25e-06
rs4859434 chr4:77152706 FAM47E All: C 108,990 15 T vs. C 0.175 (T) 0.483 (T) 1.09 (1.05-1.14) 0 (0-50) 8.29e-06
rs1837867 chr4:77149576 FAM47E All: C 108,990 15 G vs. A 0.158 (G) 0.483 (G) 1.09 (1.05-1.14) 0 (0-48) 8.42e-06
rs6846983 chr4:77151938 FAM47E All: C 108,990 15 C vs. T 0.175 (C) 0.483 (C) 1.09 (1.05-1.14) 0 (0-50) 8.45e-06
rs7697073 chr4:77132634 SCARB2 All: C 108,990 15 T vs. C 0.333 (T) 0.367 (C) 1.08 (1.04-1.12) 0 (0-52) 9.47e-06
rs11097314 chr4:77187556 FAM47E All: C 108,990 15 A vs. G 0.4 (A) 0.458 (A) 1.07 (1.04-1.11) 32 (0-63) 9.97e-06
rs10019831 chr4:77222933 FAM47E-STBD1 All: C 108,990 15 A vs. C 0.075 (A) 0.175 (A) 0.89 (0.85-0.94) 0 (0-52) 1.03e-05
rs1876539 chr4:77190069 FAM47E All: C 108,990 15 T vs. C 0.417 (T) 0.458 (T) 1.07 (1.04-1.11) 35 (0-65) 1.07e-05
rs13149410 chr4:77174072 FAM47E C - 13 T vs. C 0.042 (C) - <1 (-) 0 (-) <1.00e-04
rs4859648 chr4:77174662 FAM47E All: C 108,990 15 G vs. A 0.075 (G) 0.458 (G) 1.13 (1.07-1.19) 0 (0-53) 1.62e-05
rs34385906 chr4:77154193 FAM47E All: C 108,990 15 T vs. C 0.092 (T) - 1.11 (1.06-1.17) 0 (0-42) 1.74e-05
rs35472515 chr4:77154196 FAM47E All: C 108,990 15 G vs. A 0.092 (G) - 1.11 (1.06-1.17) 0 (0-42) 1.74e-05
rs4530661 chr4:77149335 FAM47E C - 13 A vs. C 0.242 (A) 0.142 (C) >1 (-) 0 (-) <1.00e-04
rs35507310 chr4:77154709 FAM47E All: C 108,990 15 G vs. T - - 0.90 (0.85-0.94) 0 (0-50) 2.33e-05
rs6858014 chr4:77085729 SCARB2 All: C 108,990 15 C vs. A - - 0.92 (0.89-0.96) 23 (0-58) 2.58e-05
rs1876533 chr4:77217812 FAM47E-STBD1 All: C 102,085 14 T vs. C 0.425 (T) 0.3 (T) 0.93 (0.90-0.96) 5 (0-57) 2.98e-05
rs56049812 chr4:77227676 FAM47E-STBD1 All: C 108,990 15 A vs. C 0.492 (A) 0.117 (C) 0.93 (0.91-0.96) 0 (0-10) 2.98e-05
rs72655587 chr4:77195110 FAM47E All: C 108,990 15 C vs. T 0.142 (C) 0.05 (C) 0.91 (0.87-0.95) 18 (0-55) 3.05e-05
rs11938626 chr4:77104152 SCARB2 All: C 108,990 15 C vs. T 0.208 (C) 0.342 (T) 1.09 (1.05-1.13) 19 (0-56) 3.14e-05
rs1542096 chr4:77204500 FAM47E All: C 99,252 13 C vs. T 0.383 (C) 0.133 (C) 0.92 (0.89-0.96) 0 (0-55) 3.52e-05
rs11946079 chr4:77105700 SCARB2 All: C 108,990 15 G vs. T 0.217 (G) 0.342 (T) 1.08 (1.04-1.12) 19 (0-56) 3.56e-05
rs4859435 chr4:77152816 FAM47E C - 13 T vs. C 0.242 (T) 0.142 (C) >1 (-) 0 (-) <1.00e-04
rs2174921 chr4:77148055 FAM47E C - 13 C vs. G 0.242 (G) 0.142 (C) <1 (-) 0 (-) <1.00e-04
rs1465922 chr4:77134870 SCARB2 All: C 108,990 15 G vs. A 0.367 (G) 0.333 (A) 1.07 (1.04-1.11) 0 (0-49) 3.99e-05
rs35873788 chr4:77096606 SCARB2 All: C 108,990 15 T vs. G 0.217 (T) 0.392 (G) 1.08 (1.04-1.12) 17 (0-54) 4.09e-05
rs17237174 chr4:77202019 FAM47E All: C 108,990 15 C vs. T 0.25 (C) 0.042 (C) 0.92 (0.89-0.96) 40 (0-67) 4.13e-05
rs4859432 chr4:77152547 FAM47E All: C 106,227 14 T vs. C 0.108 (T) 0.483 (T) 1.10 (1.05-1.16) 0 (0-44) 4.39e-05
rs1372409 chr4:77099661 SCARB2 All: C 108,990 15 C vs. A 0.2 (C) 0.35 (A) 1.08 (1.04-1.12) 18 (0-55) 4.42e-05
rs4859429 chr4:77108306 SCARB2 All: C 108,990 15 T vs. C 0.208 (T) 0.317 (C) 1.08 (1.04-1.12) 21 (0-57) 4.61e-05
rs79393144 chr4:77183931 FAM47E All: C 108,990 15 C vs. T 0.075 (C) 0.342 (C) 1.13 (1.07-1.21) 39 (0-67) 4.63e-05
rs907446 chr4:77254804 CCDC158 All: C 108,990 15 C vs. T 0.483 (C) 0.15 (T) 0.94 (0.91-0.97) 0 (0-9) 4.63e-05
rs4859663 chr4:77235756 CCDC158 All: C 108,990 15 A vs. C 0.5 (A) 0.117 (A) 1.07 (1.04-1.10) 0 (0-5) 4.69e-05
rs1470194 chr4:77101378 SCARB2 All: C 108,990 15 C vs. A 0.092 (C) 0.25 (C) 1.15 (1.08-1.23) 12 (0-50) 4.77e-05
rs36031249 chr4:77154771 FAM47E All: C 108,990 15 G vs. A 0.083 (G) 0.45 (G) 1.12 (1.06-1.18) 0 (0-46) 4.77e-05
rs12498327 chr4:77133079 SCARB2 All: C 108,990 15 C vs. A 0.35 (C) 0.333 (A) 1.07 (1.04-1.11) 0 (0-49) 4.84e-05
rs2869851 chr4:77094831 SCARB2 All: C 108,990 15 G vs. T 0.217 (G) 0.383 (T) 1.08 (1.04-1.12) 19 (0-56) 4.96e-05
rs6822055 chr4:77196188 FAM47E All: C 108,990 15 C vs. T 0.25 (C) 0.042 (C) 0.92 (0.89-0.96) 42 (0-68) 5.51e-05
rs78586815 chr4:77168444 FAM47E All: C 108,990 15 A vs. G 0.075 (A) 0.467 (A) 1.11 (1.06-1.17) 0 (0-51) 5.85e-05

Association studies for this region [+]