GAK, chr4:843064-926161 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
Meta_image?name=rs34311866

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs77943567 chr4:802144 CPLX1 All: C 101,770 13 T vs. C 0.025 (T) - 0.72 (0.64-0.82) 26 (0-61) 3.19e-07
rs3822019 chr4:951161 TMEM175 All: C 105,041 14 T vs. C 0.125 (T) 0.192 (T) 1.12 (1.07-1.16) 21 (0-58) 5.57e-07
rs3775114 chr4:900786 GAK C - 13 T vs. C 0.3 (T) 0.208 (T) <1 (-) 0 (-) <1.00e-06
rs11724898 chr4:935933 TMEM175 C - 12 A vs. G - - <1 (-) 26 (-) <1.00e-06
rs3775113 chr4:901323 GAK C - 13 T vs. C 0.308 (T) 0.183 (T) <1 (-) 0 (-) <1.00e-06
rs2290402 chr4:941518 TMEM175 All: C 98,136 13 T vs. C 0.092 (T) 0.233 (T) 1.12 (1.07-1.17) 23 (0-60) 9.05e-07
rs56080039 chr4:886519 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.258 (A) 1.11 (1.06-1.16) 11 (0-49) 9.50e-07
rs4690202 chr4:888512 GAK All: C 108,990 15 T vs. C - - 0.90 (0.87-0.94) 10 (0-47) 1.09e-06
rs10016294 chr4:936567 TMEM175 C - 13 A vs. G - - >1 (-) 21 (-) <1.00e-04
rs41286661 chr4:957284 DGKQ All: C 105,041 14 T vs. C 0.133 (T) 0.192 (T) 1.11 (1.06-1.16) 28 (0-62) 1.60e-06
rs73207778 chr4:836762 GAK [-6302bp] C - 13 T vs. C 0.092 (T) 0.092 (T) >1 (-) 57 (-) <1.00e-04
rs11731377 chr4:971266 DGKQ All: C 105,041 14 G vs. T 0.167 (G) 0.192 (G) 1.15 (1.09-1.22) 14 (0-52) 1.75e-06
rs73207777 chr4:836046 GAK [-7018bp] C - 13 A vs. G 0.108 (G) 0.083 (G) <1 (-) 57 (-) <1.00e-04
rs56223707 chr4:881896 GAK All: C 108,990 15 T vs. C 0.158 (T) 0.267 (T) 1.11 (1.06-1.15) 7 (0-43) 1.90e-06
rs62295557 chr4:855708 GAK C - 13 A vs. G 0.292 (A) 0.1 (A) <1 (-) 0 (-) <1.00e-04
rs7697256 chr4:848335 GAK C - 13 T vs. C 0.3 (T) 0.1 (T) <1 (-) 0 (-) <1.00e-04
rs935977 chr4:943540 TMEM175 C - 12 A vs. G 0.342 (A) 0.175 (A) <1 (-) 25 (-) <1.00e-04
rs56785826 chr4:880257 GAK All: C 108,990 15 A vs. G 0.142 (A) 0.225 (A) 1.10 (1.06-1.15) 8 (0-44) 2.50e-06
rs9328760 chr4:882849 GAK All: C 108,990 15 C vs. T 0.175 (C) 0.258 (C) 1.11 (1.06-1.16) 4 (0-55) 2.61e-06
rs9328759 chr4:882845 GAK All: C 108,990 15 C vs. T 0.167 (C) 0.258 (C) 1.11 (1.06-1.16) 4 (0-55) 2.62e-06
rs7663814 chr4:858473 GAK C - 13 C vs. G 0.3 (C) 0.1 (C) <1 (-) 0 (-) <1.00e-04
rs2279186 chr4:875887 GAK C - 13 A vs. G 0.3 (A) 0.117 (A) <1 (-) 0 (-) <1.00e-04
rs35177456 chr4:828994 CPLX1 [+9008bp] C - 13 T vs. C 0.1 (T) 0.092 (T) >1 (-) 56 (-) <1.00e-04
rs150789675 chr4:846797 GAK All: C 101,324 12 T vs. C - - 0.57 (0.45-0.72) 0 (0-25) 3.51e-06
rs58036322 chr4:873417 GAK C - 13 T vs. G 0.3 (G) 0.1 (G) >1 (-) 0 (-) <1.00e-04
rs73207773 chr4:827249 CPLX1 [+7263bp] C - 13 A vs. G 0.1 (A) 0.067 (A) >1 (-) 56 (-) <1.00e-04
rs45486093 chr4:875671 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.267 (C) 1.10 (1.06-1.15) 12 (0-50) 4.57e-06
rs17165130 chr4:875339 GAK All: C 108,990 15 A vs. C 0.158 (A) 0.275 (A) 1.10 (1.06-1.15) 12 (0-50) 4.94e-06
rs60523283 chr4:865105 GAK C - 13 A vs. G 0.3 (A) 0.083 (A) <1 (-) 0 (-) <1.00e-04
rs56852661 chr4:826257 CPLX1 [+6271bp] C - 13 A vs. G 0.1 (A) 0.067 (A) >1 (-) 56 (-) <1.00e-04
rs144026795 chr4:873901 GAK C - 10 A vs. G - - >1 (-) 6 (-) <1.00e-04
rs3775127 chr4:886061 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.25 (A) 1.12 (1.07-1.18) 19 (0-56) 6.05e-06
rs2279177 chr4:852659 GAK C - 13 T vs. G 0.3 (G) 0.133 (G) >1 (-) 0 (-) <1.00e-04
rs7657330 chr4:825156 CPLX1 [+5170bp] C - 13 T vs. C 0.1 (T) 0.092 (T) >1 (-) 56 (-) <1.00e-04
rs11734742 chr4:821565 CPLX1 [+1579bp] C - 13 T vs. C 0.1 (T) 0.108 (T) >1 (-) 57 (-) <1.00e-04
rs3736087 chr4:876318 GAK All: C 108,990 15 T vs. C 0.15 (T) 0.275 (T) 1.10 (1.06-1.15) 6 (0-56) 8.22e-06
rs3775129 chr4:875155 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.275 (A) 1.10 (1.05-1.15) 11 (0-48) 9.04e-06
rs60492656 chr4:875008 GAK All: C 108,990 15 T vs. C 0.158 (T) 0.267 (T) 1.10 (1.05-1.15) 9 (0-47) 9.58e-06
rs4690229 chr4:970724 DGKQ C - 12 A vs. T 0.417 (T) 0.308 (T) >1 (-) 6 (-) <1.00e-04
rs73211813 chr4:975238 DGKQ All: C 105,041 14 T vs. C 0.15 (T) 0.183 (T) 1.12 (1.06-1.18) 20 (0-57) 1.42e-05
rs58429160 chr4:875266 GAK All: C 108,990 15 A vs. G 0.158 (A) 0.275 (A) 1.10 (1.05-1.14) 11 (0-49) 1.55e-05
rs2306244 chr4:862502 GAK All: C 108,990 15 C vs. T 0.15 (C) 0.317 (C) 1.10 (1.05-1.14) 16 (0-53) 1.60e-05
rs73207782 chr4:848764 GAK C - 13 C vs. G 0.292 (C) 0.058 (C) <1 (-) 0 (-) <1.00e-04
rs73207791 chr4:865941 GAK All: C 108,990 15 G vs. A 0.158 (G) 0.275 (G) 1.09 (1.05-1.14) 15 (0-52) 1.76e-05
rs4690339 chr4:854712 GAK All: C 108,990 15 C vs. T 0.158 (C) 0.275 (C) 1.09 (1.05-1.14) 18 (0-55) 2.08e-05
rs4690336 chr4:867242 GAK All: C 108,990 15 T vs. C 0.158 (T) 0.275 (T) 1.09 (1.05-1.14) 11 (0-48) 2.63e-05
rs7376690 chr4:813726 CPLX1 All: C 108,990 15 G vs. A 0.425 (G) 0.3 (G) 0.93 (0.91-0.96) 0 (0-23) 2.68e-05
rs11248044 chr4:815321 CPLX1 All: C 108,990 15 G vs. A 0.342 (G) 0.467 (A) 1.07 (1.04-1.11) 17 (0-55) 3.01e-05
rs11736181 chr4:877412 GAK C - 13 T vs. C 0.142 (T) 0.308 (T) >1 (-) 32 (-) <1.00e-04
rs7687101 chr4:812679 CPLX1 All: C 108,990 15 T vs. G 0.442 (T) 0.292 (T) 0.94 (0.91-0.97) 0 (0-27) 3.20e-05

Association studies for this region [+]