GAK, chr4:843064-926161 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs34311866 chr4:951947 TMEM175 All: C 120,238 21 C vs. T 0.15 (C) 0.075 (C) 1.26 (1.22-1.31) 52 (21-71) 6.00e-41
Meta_image?name=rs34311866

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs4690332 chr4:910520 GAK C - 13 T vs. C 0.333 (T) 0.283 (T) <1 (-) 9 (-) <0.05
rs73792041 chr4:896631 GAK C - 12 C vs. G 0.083 (G) - >1 (-) 0 (-) <0.05
rs899387 chr4:878048 GAK C - 12 T vs. C 0.367 (T) 0.258 (T) >1 (-) 0 (-) <0.05
rs59182769 chr4:882340 GAK C - 13 C vs. G - - >1 (-) 12 (-) <0.05
rs28440052 chr4:949893 TMEM175 C - 12 A vs. C 0.325 (C) 0.267 (C) >1 (-) 0 (-) <0.05
rs11724439 chr4:910521 GAK C - 3 A vs. G 0.017 (A) - >1 (-) 0 (-) <0.05
rs115550031 chr4:856102 GAK C - 12 A vs. G - - <1 (-) 0 (-) <0.05
rs2306253 chr4:884475 GAK C - 12 C vs. G 0.042 (G) 0.275 (G) >1 (-) 0 (-) <0.05
rs3736083 chr4:877709 GAK C - 13 T vs. C 0.492 (T) 0.408 (C) >1 (-) 0 (-) <0.05
rs34509509 chr4:888361 GAK C - 13 A vs. C 0.133 (A) - <1 (-) 0 (-) <0.05
rs76848809 chr4:851120 GAK C - 12 T vs. G 0.017 (G) - >1 (-) 0 (-) <0.05
rs11942404 chr4:872223 GAK C - 12 A vs. T 0.017 (A) 0.033 (A) <1 (-) 0 (-) <0.05
rs754758 chr4:924280 GAK C - 13 A vs. C 0.367 (A) 0.267 (A) <1 (-) 8 (-) <0.05
rs3775124 chr4:891503 GAK C - 13 C vs. G - - <1 (-) 0 (-) >0.05
rs76420143 chr4:830065 CPLX1 [+10079bp] C - 12 T vs. C 0.017 (T) 0.025 (T) <1 (-) 0 (-) >0.05
rs2306241 chr4:844035 GAK C - 13 T vs. C 0.392 (C) 0.483 (C) >1 (-) 35 (-) >0.05
rs41286653 chr4:877919 GAK C - 12 T vs. C 0.008 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs76643823 chr4:828050 CPLX1 [+8064bp] C - 12 A vs. G 0.083 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs59898624 chr4:810507 CPLX1 C - 12 A vs. G 0.067 (A) 0.258 (A) <1 (-) 5 (-) >0.05
rs12511420 chr4:815804 CPLX1 C - 13 A vs. G 0.4 (G) 0.242 (G) >1 (-) 2 (-) >0.05
rs77092940 chr4:831561 GAK [-11503bp] C - 13 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs79188260 chr4:824565 CPLX1 [+4579bp] C - 6 A vs. G 0.008 (A) - >1 (-) 0 (-) >0.05
rs10471248 chr4:825534 CPLX1 [+5548bp] C - 13 A vs. G 0.45 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs4690201 chr4:904695 GAK C - 13 T vs. C 0.383 (T) 0.283 (T) <1 (-) 12 (-) >0.05
rs73211812 chr4:973483 DGKQ C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs79565855 chr4:826725 CPLX1 [+6739bp] C - 12 A vs. G 0.083 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs11248043 chr4:812753 CPLX1 C - 12 A vs. G 0.175 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs62294153 chr4:794293 CPLX1 C - 12 T vs. C - - >1 (-) 3 (-) >0.05
rs114066161 chr4:825635 CPLX1 [+5649bp] C - 12 A vs. G 0.083 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs116652272 chr4:900578 GAK C - 9 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs3733351 chr4:861628 GAK C - 13 T vs. C 0.417 (T) 0.475 (T) <1 (-) 23 (-) >0.05
rs59710573 chr4:823093 CPLX1 [+3107bp] C - 12 C vs. G 0.083 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs936551 chr4:821490 CPLX1 [+1504bp] C - 13 A vs. G 0.433 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs11248047 chr4:821553 CPLX1 [+1567bp] C - 13 A vs. G 0.433 (A) 0.442 (A) >1 (-) 0 (-) >0.05
rs11734954 chr4:824332 CPLX1 [+4346bp] C - 13 A vs. G 0.442 (G) 0.442 (G) <1 (-) 0 (-) >0.05
rs28671147 chr4:955084 DGKQ C - 12 A vs. G 0.4 (A) 0.467 (A) >1 (-) 0 (-) >0.05
rs11721731 chr4:824438 CPLX1 [+4452bp] C - 13 T vs. C 0.442 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs7656533 chr4:824755 CPLX1 [+4769bp] C - 13 T vs. C 0.433 (C) 0.442 (C) <1 (-) 0 (-) >0.05
rs11933159 chr4:824604 CPLX1 [+4618bp] C - 13 T vs. C 0.433 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs7665967 chr4:824845 CPLX1 [+4859bp] C - 13 A vs. G 0.442 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs4690318 chr4:824976 CPLX1 [+4990bp] C - 13 A vs. G 0.433 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs115384752 chr4:896101 GAK C - 6 A vs. C 0.017 (C) - >1 (-) 0 (-) >0.05
rs4690324 chr4:960081 DGKQ C - 12 A vs. G 0.208 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs10471247 chr4:825452 CPLX1 [+5466bp] C - 13 T vs. C 0.433 (C) 0.433 (C) <1 (-) 0 (-) >0.05
rs4690320 chr4:825370 CPLX1 [+5384bp] C - 13 T vs. C 0.433 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs11725777 chr4:826014 CPLX1 [+6028bp] C - 13 T vs. C 0.45 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs139951812 chr4:898846 GAK C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs11931773 chr4:828772 CPLX1 [+8786bp] C - 13 C vs. G 0.142 (C) 0.242 (C) >1 (-) 0 (-) >0.05
rs9998888 chr4:824575 CPLX1 [+4589bp] C - 13 T vs. C 0.442 (T) 0.433 (T) >1 (-) 0 (-) >0.05
rs6599384 chr4:822706 CPLX1 [+2720bp] C - 13 T vs. C 0.433 (T) 0.45 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]