HCG27, chr6:31165537-31171745 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6930643 chr6:31174035 HCG27 [+2290bp] All: C 103,235 14 C vs. T - - 0.92 (0.89-0.95) 19 (0-56) 1.23e-06
Meta_image?name=rs6930643

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6901657 chr6:31121600 CCHCR1 C - 12 T vs. C - - <1 (-) 42 (-) >0.05
rs80264822 chr6:31215334 HLA-C [-21192bp] C - 4 A vs. G 0.025 (A) - >1 (-) 0 (-) >0.05
rs1620471 chr6:31188607 HCG27 [+16862bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs3871247 chr6:31145702 POU5F1 C - 12 A vs. G 0.3 (A) 0.483 (G) <1 (-) 0 (-) >0.05
rs9263986 chr6:31191070 HCG27 [+19325bp] C - 12 A vs. G 0.45 (A) 0.458 (A) >1 (-) 0 (-) >0.05
rs28362340 chr6:31165359 HCG27 [-178bp] C - 5 C vs. G 0.075 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs113647885 chr6:31215293 HLA-C [-21233bp] C - 4 T vs. C 0.025 (T) 0.083 (T) >1 (-) 0 (-) >0.05
rs1623026 chr6:31188312 HCG27 [+16567bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs142943269 chr6:31198499 HCG27 [+26754bp] C - 5 C vs. G - - <1 (-) 0 (-) >0.05
rs9391814 chr6:31145107 POU5F1 C - 12 A vs. G - - >1 (-) 21 (-) >0.05
rs2073716 chr6:31122997 CCHCR1 C - 12 C vs. G 0.033 (G) 0.167 (G) <1 (-) 42 (-) >0.05
rs1634706 chr6:31178289 HCG27 [+6544bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs114119211 chr6:31156985 POU5F1 [+8477bp] C - 12 T vs. G 0.033 (G) 0.233 (G) <1 (-) 38 (-) >0.05
rs9263861 chr6:31158633 HCG27 [-6904bp] C - 12 A vs. G 0.158 (G) - 1 (-) 41 (-) >0.05

Association studies for this region [+]