HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
rs9266630 chr6:31346869 RNU6-283P [+8852bp] All: C 103,235 14 A vs. C 0.258 (A) 0.2 (A) 1.09 (1.05-1.13) 10 (0-49) 1.25e-05
rs35534650 chr6:31313855 HLA-B [-7794bp] All: C 78,022 6 A vs. G 0.225 (A) 0.233 (A) 0.87 (0.81-0.93) 0 (0-51) 2.94e-05
rs35628925 chr6:31314943 HLA-B [-6706bp] All: C 78,022 6 T vs. C 0.225 (T) 0.233 (T) 0.87 (0.81-0.93) 0 (0-51) 3.37e-05
rs28399935 chr6:31316468 HLA-B [-5181bp] All: C 89,130 10 G vs. A 0.225 (G) 0.2 (G) 0.89 (0.85-0.95) 0 (0-56) 8.17e-05
rs4394275 chr6:31318177 HLA-B [-3472bp] All: C 89,130 10 A vs. G 0.225 (A) 0.233 (A) 0.90 (0.85-0.95) 0 (0-58) 1.00e-04
rs5014817 chr6:31316764 HLA-B [-4885bp] All: C 89,130 10 G vs. A 0.417 (G) 0.275 (G) 0.92 (0.87-0.96) 0 (0-45) 1.08e-04
rs34213790 chr6:31318579 HLA-B [-3070bp] All: C 89,130 10 A vs. G 0.225 (A) 0.267 (A) 0.90 (0.86-0.95) 0 (0-59) 1.17e-04
rs11961408 chr6:31317850 HLA-B [-3799bp] All: C 89,130 10 A vs. G 0.258 (A) 0.25 (A) 0.89 (0.84-0.94) 0 (0-58) 1.29e-04
rs9264873 chr6:31271700 HLA-C [+31793bp] All: C 103,235 14 T vs. C 0.433 (T) 0.283 (T) 1.07 (1.03-1.10) 2 (0-56) 1.44e-04
rs3916451 chr6:31314302 HLA-B [-7347bp] All: C 90,893 9 C vs. T - - 0.91 (0.87-0.96) 0 (0-53) 1.49e-04
rs9266047 chr6:31318985 HLA-B [-2664bp] All: C 89,130 10 A vs. G 0.433 (A) 0.417 (A) 0.92 (0.88-0.96) 0 (0-41) 1.92e-04
rs4463302 chr6:31343667 RNU6-283P [+5650bp] All: C 93,766 12 C vs. T 0.067 (C) 0.125 (C) 1.13 (1.06-1.21) 32 (0-65) 2.20e-04
rs9265989 chr6:31316417 HLA-B [-5232bp] All: C 96,035 11 A vs. G 0.425 (A) 0.475 (G) 1.08 (1.04-1.12) 0 (0-51) 2.38e-04
rs9265988 chr6:31316387 HLA-B [-5262bp] All: C 96,035 11 C vs. T 0.425 (C) 0.475 (T) 1.08 (1.04-1.12) 0 (0-52) 2.40e-04
rs9461688 chr6:31271716 HLA-C [+31809bp] All: C 103,235 14 G vs. A 0.258 (G) 0.258 (G) 0.94 (0.90-0.97) 10 (0-48) 2.45e-04
rs4394274 chr6:31318164 HLA-B [-3485bp] All: C 89,130 10 A vs. C 0.433 (A) 0.433 (A) 0.92 (0.89-0.96) 0 (0-41) 2.66e-04
rs13198903 chr6:31344157 RNU6-283P [+6140bp] All: C 93,766 12 T vs. C 0.067 (T) 0.092 (T) 1.13 (1.06-1.20) 24 (0-61) 2.72e-04
rs4540292 chr6:31317182 HLA-B [-4467bp] All: C 89,130 10 G vs. T 0.425 (G) 0.433 (G) 0.93 (0.89-0.97) 0 (0-44) 2.91e-04
rs9266030 chr6:31317820 HLA-B [-3829bp] All: C 89,130 10 A vs. G 0.433 (A) 0.45 (A) 0.93 (0.89-0.97) 0 (0-42) 2.96e-04
rs9266022 chr6:31317446 HLA-B [-4203bp] All: C 89,130 10 A vs. G 0.433 (A) 0.442 (A) 0.93 (0.89-0.97) 0 (0-42) 3.00e-04
rs4409218 chr6:31317115 HLA-B [-4534bp] All: C 89,130 10 A vs. C 0.433 (A) 0.433 (A) 0.93 (0.89-0.97) 0 (0-43) 3.02e-04
rs4530905 chr6:31316880 HLA-B [-4769bp] All: C 89,130 10 T vs. C 0.433 (T) - 0.93 (0.89-0.97) 0 (0-42) 3.07e-04
rs6909636 chr6:31346599 RNU6-283P [+8582bp] All: C 103,235 14 A vs. G 0.375 (A) 0.458 (G) 0.94 (0.91-0.97) 0 (0-49) 3.24e-04
rs2596512 chr6:31317828 HLA-B [-3821bp] All: C 89,130 10 T vs. C 0.425 (T) 0.5 (T) 1.08 (1.03-1.12) 0 (0-61) 3.53e-04
rs9266002 chr6:31316713 HLA-B [-4936bp] All: C 89,130 10 G vs. A 0.425 (G) 0.483 (A) 1.08 (1.03-1.12) 0 (0-60) 3.62e-04
rs4644106 chr6:31319586 HLA-B [-2063bp] All: C 91,640 9 C vs. T 0.275 (C) 0.275 (C) 1.11 (1.05-1.18) 24 (0-64) 3.66e-04
rs2923005 chr6:31317129 HLA-B [-4520bp] All: C 89,130 10 G vs. T 0.425 (G) 0.483 (T) 1.07 (1.03-1.12) 0 (0-62) 4.01e-04
rs9265995 chr6:31316535 HLA-B [-5114bp] All: C 89,130 10 C vs. T 0.5 (C) 0.467 (C) 0.93 (0.89-0.97) 0 (0-59) 4.20e-04
rs9266000 chr6:31316651 HLA-B [-4998bp] All: C 89,130 10 T vs. C 0.433 (T) 0.475 (C) 1.08 (1.04-1.13) 0 (0-60) 4.25e-04
rs2187578 chr6:31317478 HLA-B [-4171bp] All: C 89,130 10 T vs. G 0.425 (T) 0.492 (G) 1.07 (1.03-1.12) 0 (0-61) 4.26e-04
rs9265992 chr6:31316482 HLA-B [-5167bp] All: C 89,130 10 G vs. A 0.433 (G) 0.4 (A) 1.09 (1.04-1.14) 0 (0-61) 4.32e-04
rs2923006 chr6:31317099 HLA-B [-4550bp] All: C 89,130 10 G vs. T 0.425 (G) 0.483 (T) 1.07 (1.03-1.12) 0 (0-61) 4.35e-04
rs9265952 chr6:31315290 HLA-B [-6359bp] All: C 87,937 9 A vs. G 0.358 (A) 0.275 (A) 0.91 (0.87-0.96) 0 (0-64) 4.71e-04
rs9266710 chr6:31349396 RNU6-283P [+11379bp] All: C 103,235 14 C vs. T 0.283 (C) 0.108 (C) 1.07 (1.03-1.11) 12 (0-51) 4.82e-04
rs115193934 chr6:31276659 HLA-C [+36752bp] C - 4 C vs. G - 0.158 (C) >1 (-) 0 (-) <0.05
rs17193360 - HLA-B All: C 93,766 12 A vs. G - - 0.88 (0.83-0.95) 37 (0-68) 5.27e-04
rs2905716 chr6:31337167 RNU6-283P [-744bp] All: C 98,798 12 A vs. G 0.183 (A) 0.075 (A) 1.08 (1.04-1.13) 0 (0-59) 5.42e-04
rs2922995 chr6:31337156 RNU6-283P [-755bp] All: C 98,798 12 T vs. C 0.183 (T) 0.075 (T) 1.08 (1.04-1.13) 1 (0-59) 5.56e-04
rs13193697 chr6:31345815 RNU6-283P [+7798bp] All: C 90,495 11 C vs. T - - 0.78 (0.68-0.90) 8 (0-63) 5.94e-04
rs9266716 chr6:31349727 RNU6-283P [+11710bp] All: C 103,235 14 C vs. T 0.342 (C) 0.125 (C) 1.06 (1.03-1.10) 15 (0-54) 5.97e-04
rs9266715 chr6:31349720 RNU6-283P [+11703bp] All: C 103,235 14 C vs. T 0.325 (C) 0.108 (C) 1.06 (1.03-1.10) 16 (0-54) 6.06e-04
rs9266719 chr6:31349805 RNU6-283P [+11788bp] All: C 103,235 14 C vs. A 0.325 (C) 0.108 (C) 1.06 (1.03-1.10) 15 (0-53) 6.08e-04
rs9265951 chr6:31315270 HLA-B [-6379bp] All: C 84,927 7 T vs. C 0.442 (T) 0.467 (C) 0.92 (0.87-0.96) 0 (0-57) 6.28e-04
rs9266691 chr6:31348629 RNU6-283P [+10612bp] All: C 103,235 14 A vs. G 0.292 (A) 0.108 (A) 1.07 (1.03-1.11) 15 (0-53) 6.66e-04
rs2523566 chr6:31330099 HLA-B [+5134bp] All: C 96,035 11 T vs. C 0.192 (T) 0.042 (T) 1.09 (1.04-1.15) 13 (0-53) 6.72e-04
rs2442730 chr6:31319157 HLA-B [-2492bp] C - 7 A vs. C 0.317 (C) 0.3 (C) <1 (-) 9 (-) <0.05
rs9265909 chr6:31313714 HLA-B [-7935bp] All: C 85,373 8 G vs. A 0.392 (G) 0.392 (G) 1.08 (1.03-1.14) 0 (0-53) 8.22e-04
rs9266708 chr6:31349254 RNU6-283P [+11237bp] All: C 103,235 14 G vs. A 0.292 (G) 0.108 (G) 1.07 (1.03-1.11) 10 (0-48) 8.52e-04
rs9266709 chr6:31349257 RNU6-283P [+11240bp] All: C 103,235 14 G vs. A 0.308 (G) 0.125 (G) 1.07 (1.03-1.11) 10 (0-48) 8.52e-04

Association studies for this region [+]