HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9266456 chr6:31338585 RNU6-283P [+568bp] C - 12 T vs. G 0.175 (T) 0.317 (T) <1 (-) 0 (-) >0.05
rs9266533 chr6:31341777 RNU6-283P [+3760bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05
rs2853916 chr6:31275246 HLA-C [+35339bp] C - 12 A vs. G 0.183 (A) 0.333 (A) <1 (-) 6 (-) >0.05
rs2442754 chr6:31351572 RNU6-283P [+13555bp] C - 12 T vs. G 0.192 (G) 0.125 (G) <1 (-) 39 (-) >0.05
rs35735140 chr6:31320849 HLA-B [-800bp] C - 3 T vs. C 0.05 (C) 0.117 (C) >1 (-) 11 (-) >0.05
rs28611443 chr6:31341411 RNU6-283P [+3394bp] C - 9 A vs. C 0.058 (A) 0.075 (A) <1 (-) 0 (-) >0.05
rs2507978 chr6:31351664 RNU6-283P [+13647bp] C - 12 A vs. G 0.417 (G) 0.45 (A) <1 (-) 0 (-) >0.05
rs9266399 chr6:31335806 RNU6-283P [-2105bp] C - 11 A vs. T 0.175 (T) 0.342 (T) >1 (-) 0 (-) >0.05
rs7770216 chr6:31340611 RNU6-283P [+2594bp] C - 12 T vs. G 0.175 (T) 0.392 (T) <1 (-) 0 (-) >0.05
rs6924404 chr6:31339302 RNU6-283P [+1285bp] C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs9264941 chr6:31274298 HLA-C [+34391bp] C - 11 A vs. G 0.175 (A) 0.1 (A) >1 (-) 19 (-) >0.05
rs9266303 chr6:31329609 HLA-B [+4644bp] C - 8 T vs. G 0.125 (T) - >1 (-) 60 (-) >0.05
rs4959072 chr6:31346554 RNU6-283P [+8537bp] C - 12 C vs. G 0.192 (C) 0.167 (C) <1 (-) 0 (-) >0.05
rs11962818 chr6:31320176 HLA-B [-1473bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs2523522 chr6:31340328 RNU6-283P [+2311bp] C - 10 T vs. C 0.333 (T) 0.308 (T) >1 (-) 6 (-) >0.05
rs9266276 chr6:31326272 HLA-B [+1307bp] C - 4 A vs. G 0.217 (G) - <1 (-) 1 (-) >0.05
rs2523521 chr6:31340488 RNU6-283P [+2471bp] C - 10 A vs. G 0.333 (G) 0.308 (G) <1 (-) 9 (-) >0.05
rs7770587 chr6:31340991 RNU6-283P [+2974bp] C - 12 A vs. C 0.175 (A) 0.4 (A) <1 (-) 0 (-) >0.05
rs2524168 chr6:31275163 HLA-C [+35256bp] C - 12 T vs. C 0.217 (C) 0.333 (C) >1 (-) 13 (-) >0.05
rs2523520 chr6:31340491 RNU6-283P [+2474bp] C - 10 A vs. G 0.342 (A) 0.308 (A) >1 (-) 9 (-) >0.05
rs9265638 chr6:31300012 HLA-B [-21637bp] C - 5 T vs. C 0.425 (T) 0.267 (T) <1 (-) 64 (-) >0.05
rs396243 chr6:31275174 HLA-C [+35267bp] C - 12 T vs. C 0.217 (C) 0.342 (C) >1 (-) 13 (-) >0.05
rs113404892 chr6:31362879 MICA [-8477bp] C - 11 T vs. C 0.167 (T) 0.133 (T) <1 (-) 0 (-) >0.05
rs9391723 chr6:31315046 HLA-B [-6603bp] C - 5 A vs. G - - >1 (-) 13 (-) >0.05
rs2394990 chr6:31340559 RNU6-283P [+2542bp] C - 10 A vs. C 0.325 (C) 0.308 (C) <1 (-) 9 (-) >0.05
rs114259526 chr6:31362850 MICA [-8506bp] C - 11 A vs. T 0.142 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs9265587 chr6:31299112 HLA-B [-22537bp] C - 4 T vs. C 0.433 (C) 0.467 (T) <1 (-) 53 (-) >0.05
chr6:31362579 chr6:31362579 MICA [-8777bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs9265585 chr6:31298964 HLA-B [-22685bp] C - 4 C vs. G 0.442 (C) 0.5 (C) >1 (-) 52 (-) >0.05
rs2523598 chr6:31326175 HLA-B [+1210bp] C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs34768512 chr6:31283700 HLA-B [-37949bp] C - 5 A vs. G 0.133 (A) 0.208 (A) <1 (-) 26 (-) >0.05
rs9265593 chr6:31299161 HLA-B [-22488bp] C - 4 A vs. G 0.492 (G) 0.467 (G) >1 (-) 55 (-) >0.05
rs2596440 chr6:31340219 RNU6-283P [+2202bp] C - 10 A vs. G 0.325 (G) 0.317 (G) <1 (-) 4 (-) >0.05
rs2523578 chr6:31328542 HLA-B [+3577bp] C - 9 A vs. G 0.308 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs2596441 chr6:31340225 RNU6-283P [+2208bp] C - 10 A vs. G 0.333 (G) 0.267 (G) <1 (-) 4 (-) >0.05
rs2904599 chr6:31356803 MICA [-14553bp] C - 7 A vs. G 0.192 (A) 0.183 (A) <1 (-) 0 (-) >0.05
rs9265588 chr6:31299125 HLA-B [-22524bp] C - 4 T vs. C - - <1 (-) 54 (-) >0.05
rs7769957 chr6:31340630 RNU6-283P [+2613bp] C - 12 T vs. C 0.175 (T) 0.392 (T) <1 (-) 0 (-) >0.05
rs9265578 chr6:31298865 HLA-B [-22784bp] C - 3 T vs. C 0.475 (C) 0.5 (C) <1 (-) 68 (-) >0.05
rs77530144 chr6:31275657 HLA-C [+35750bp] C - 11 T vs. C - 0.108 (C) <1 (-) 21 (-) >0.05
rs35110522 chr6:31320071 HLA-B [-1578bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs9265737 chr6:31302355 HLA-B [-19294bp] C - 3 T vs. G 0.225 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs6937174 chr6:31369185 MICA [-2171bp] C - 12 A vs. G 0.142 (A) 0.158 (A) <1 (-) 0 (-) >0.05
rs9348866 chr6:31358955 MICA [-12401bp] C - 4 A vs. T 0.3 (T) 0.417 (A) >1 (-) 0 (-) >0.05
rs9265591 chr6:31299142 HLA-B [-22507bp] C - 4 A vs. T 0.483 (T) 0.458 (A) <1 (-) 54 (-) >0.05
rs9265592 chr6:31299150 HLA-B [-22499bp] C - 4 T vs. C 0.475 (T) 0.442 (C) >1 (-) 54 (-) >0.05
rs72867732 chr6:31360289 MICA [-11067bp] C - 3 A vs. G 0.05 (G) 0.067 (G) <1 (-) 60 (-) >0.05
rs7742428 chr6:31345931 RNU6-283P [+7914bp] C - 12 C vs. G 0.175 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs7739560 chr6:31364790 MICA [-6566bp] C - 12 T vs. C 0.133 (T) 0.142 (T) <1 (-) 0 (-) >0.05
rs147109807 chr6:31284353 HLA-B [-37296bp] C - 3 A vs. G - - <1 (-) 0 (-) >0.05

Association studies for this region [+]