HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
View on:

Most significant meta-analysis in this region
Append your own data and create meta-analysis

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6904137 chr6:31339380 RNU6-283P [+1363bp] C - 12 T vs. C 0.158 (C) 0.258 (C) >1 (-) 0 (-) >0.05
rs28771422 chr6:31315030 HLA-B [-6619bp] C - 5 A vs. G - - <1 (-) 13 (-) >0.05
rs6910516 chr6:31343827 RNU6-283P [+5810bp] C - 12 A vs. G 0.175 (G) 0.342 (G) >1 (-) 0 (-) >0.05
rs9264969 chr6:31278415 HLA-C [+38508bp] C - 10 T vs. C 0.3 (T) 0.45 (C) >1 (-) 22 (-) >0.05
rs6933050 chr6:31343632 RNU6-283P [+5615bp] C - 12 T vs. C 0.175 (C) 0.342 (C) >1 (-) 0 (-) >0.05
rs9265594 chr6:31299173 HLA-B [-22476bp] C - 4 T vs. C - - >1 (-) 55 (-) >0.05
rs9265596 chr6:31299189 HLA-B [-22460bp] C - 4 A vs. G 0.475 (G) 0.467 (A) <1 (-) 53 (-) >0.05
rs116704042 chr6:31275511 HLA-C [+35604bp] C - 11 A vs. T - 0.075 (A) >1 (-) 20 (-) >0.05
rs112420503 chr6:31320097 HLA-B [-1552bp] C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs2523585 chr6:31327504 HLA-B [+2539bp] C - 7 T vs. C 0.492 (C) - >1 (-) 0 (-) >0.05
rs76884631 chr6:31275910 HLA-C [+36003bp] C - 11 T vs. C 0.05 (T) 0.175 (T) <1 (-) 10 (-) >0.05
rs36004907 chr6:31281491 HLA-B [-40158bp] C - 6 T vs. G 0.125 (T) 0.15 (T) <1 (-) 13 (-) >0.05
rs138099588 chr6:31365110 MICA [-6246bp] C - 8 C vs. G - - >1 (-) 0 (-) >0.05
rs9265595 chr6:31299183 HLA-B [-22466bp] C - 4 T vs. C - - >1 (-) 54 (-) >0.05
rs56761367 chr6:31282629 HLA-B [-39020bp] C - 4 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs56671953 chr6:31352694 RNU6-283P [+14677bp] C - 11 T vs. G 0.067 (T) 0.083 (T) >1 (-) 61 (-) >0.05
rs56006638 chr6:31282934 HLA-B [-38715bp] C - 4 A vs. G 0.05 (G) - <1 (-) 0 (-) >0.05
rs2523590 chr6:31327064 HLA-B [+2099bp] C - 5 T vs. C 0.325 (C) 0.158 (C) <1 (-) 0 (-) >0.05
rs2596484 chr6:31363840 MICA [-7516bp] C - 10 A vs. G 0.183 (A) 0.067 (A) >1 (-) 7 (-) >0.05
rs6909001 chr6:31339667 RNU6-283P [+1650bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs2596474 chr6:31326223 HLA-B [+1258bp] C - 4 A vs. G 0.283 (G) 0.167 (G) <1 (-) 0 (-) >0.05
rs72882972 chr6:31354939 MICA [-16417bp] C - 10 A vs. T 0.067 (T) 0.083 (T) <1 (-) 66 (-) >0.05
rs28380922 chr6:31315055 HLA-B [-6594bp] C - 4 A vs. C - - >1 (-) 34 (-) >0.05
rs2524167 chr6:31284136 HLA-B [-37513bp] C - 4 T vs. C 0.467 (T) 0.383 (C) >1 (-) 62 (-) >0.05
rs2596560 chr6:31355318 MICA [-16038bp] C - 12 T vs. C 0.225 (C) 0.267 (C) >1 (-) 0 (-) >0.05
rs9266395 chr6:31335566 RNU6-283P [-2345bp] C - 11 T vs. C 0.167 (T) 0.342 (T) <1 (-) 0 (-) >0.05
rs9266245 chr6:31325702 HLA-B [+737bp] C - 6 A vs. G 0.325 (A) - >1 (-) 0 (-) >0.05
rs9266244 chr6:31325692 HLA-B [+727bp] C - 6 A vs. G 0.333 (G) 0.1 (G) <1 (-) 0 (-) >0.05
rs6930344 chr6:31367989 MICA [-3367bp] C - 12 A vs. C 0.142 (A) - <1 (-) 0 (-) >0.05
rs17193150 chr6:31337092 RNU6-283P [-819bp] C - 11 T vs. C 0.058 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs2442709 chr6:31339240 RNU6-283P [+1223bp] C - 11 A vs. G 0.375 (A) 0.342 (A) >1 (-) 0 (-) >0.05
rs2523623 chr6:31315729 HLA-B [-5920bp] C - 4 T vs. C 0.425 (C) 0.417 (C) >1 (-) 36 (-) >0.05
rs9266329 chr6:31330788 HLA-B [+5823bp] C - 12 A vs. G 0.167 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs17199474 chr6:31336960 RNU6-283P [-951bp] C - 11 A vs. G 0.058 (A) 0.092 (A) <1 (-) 0 (-) >0.05
chr6:31362587 chr6:31362587 MICA [-8769bp] C - 6 A vs. C - - <1 (-) 0 (-) >0.05
rs9266241 chr6:31325565 HLA-B [+600bp] C - 7 A vs. G 0.383 (G) - <1 (-) 0 (-) >0.05
rs9265600 chr6:31299312 HLA-B [-22337bp] C - 4 A vs. G - - >1 (-) 55 (-) >0.05
rs6929134 chr6:31339718 RNU6-283P [+1701bp] C - 12 A vs. C 0.183 (A) 0.383 (A) <1 (-) 0 (-) >0.05
rs9391720 chr6:31314969 HLA-B [-6680bp] C - 5 A vs. G 0.442 (A) 0.392 (G) <1 (-) 11 (-) >0.05
rs9266234 chr6:31325494 HLA-B [+529bp] C - 6 T vs. C 0.392 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs74568989 chr6:31275113 HLA-C [+35206bp] C - 8 T vs. C - 0.05 (T) <1 (-) 0 (-) >0.05
rs6924350 chr6:31339556 RNU6-283P [+1539bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs9265601 chr6:31299328 HLA-B [-22321bp] C - 4 C vs. G - - <1 (-) 53 (-) >0.05
rs9266235 chr6:31325504 HLA-B [+539bp] C - 6 T vs. C 0.4 (T) 0.192 (T) >1 (-) 0 (-) >0.05
rs17198965 chr6:31276223 HLA-C [+36316bp] C - 11 C vs. G - 0.158 (G) <1 (-) 0 (-) >0.05
rs9266490 chr6:31340158 RNU6-283P [+2141bp] C - 12 A vs. G 0.183 (G) 0.392 (G) >1 (-) 0 (-) >0.05
rs9266514 chr6:31341312 RNU6-283P [+3295bp] C - 10 T vs. C 0.333 (C) 0.308 (C) <1 (-) 17 (-) >0.05
rs73728564 chr6:31363518 MICA [-7838bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs9265602 chr6:31299329 HLA-B [-22320bp] C - 4 C vs. G - - <1 (-) 54 (-) >0.05
rs9266766 chr6:31351675 RNU6-283P [+13658bp] C - 12 C vs. G 0.083 (C) 0.25 (C) <1 (-) 0 (-) >0.05

Association studies for this region [+]