HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9266775 chr6:31353417 RNU6-283P [+15400bp] C - 12 A vs. G 0.083 (G) 0.25 (G) >1 (-) 0 (-) >0.05
rs9266774 chr6:31352880 RNU6-283P [+14863bp] C - 12 T vs. C 0.083 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs61292951 chr6:31335703 RNU6-283P [-2208bp] C - 11 T vs. C 0.058 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs9266512 chr6:31341260 RNU6-283P [+3243bp] C - 10 A vs. T 0.342 (A) 0.308 (A) >1 (-) 14 (-) >0.05
rs139644849 chr6:31361083 MICA [-10273bp] C - 6 A vs. C - - <1 (-) 0 (-) >0.05
rs9266511 chr6:31341253 RNU6-283P [+3236bp] C - 10 T vs. C 0.333 (C) 0.325 (C) <1 (-) 14 (-) >0.05
rs7767142 chr6:31335311 RNU6-283P [-2600bp] C - 11 A vs. T 0.058 (T) 0.083 (T) >1 (-) 0 (-) >0.05
rs4293988 chr6:31350380 RNU6-283P [+12363bp] C - 12 T vs. G 0.083 (T) 0.3 (T) <1 (-) 0 (-) >0.05
rs4997234 chr6:31326948 HLA-B [+1983bp] C - 5 A vs. C 0.058 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs3132477 chr6:31284121 HLA-B [-37528bp] C - 3 A vs. G 0.242 (G) 0.167 (G) <1 (-) 0 (-) >0.05
rs9265590 chr6:31299137 HLA-B [-22512bp] C - 3 T vs. C - - >1 (-) 68 (-) >0.05
rs4993823 chr6:31327371 HLA-B [+2406bp] C - 5 T vs. C 0.058 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs2523454 chr6:31367865 MICA [-3491bp] C - 12 A vs. G 0.367 (A) 0.208 (A) <1 (-) 0 (-) >0.05
rs4997235 chr6:31326929 HLA-B [+1964bp] C - 5 A vs. C 0.058 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs2394974 chr6:31311872 HLA-B [-9777bp] C - 4 A vs. G 0.308 (A) 0.225 (A) <1 (-) 0 (-) >0.05
rs9266701 chr6:31349030 RNU6-283P [+11013bp] C - 12 T vs. G 0.083 (T) 0.25 (T) <1 (-) 0 (-) >0.05
rs4122185 chr6:31326683 HLA-B [+1718bp] C - 5 A vs. G 0.058 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs9266688 chr6:31348543 RNU6-283P [+10526bp] C - 12 A vs. G 0.083 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs6906175 chr6:31371101 MICA [-255bp] C - 12 C vs. G 0.2 (C) 0.192 (C) <1 (-) 0 (-) >0.05
rs28771421 chr6:31315003 HLA-B [-6646bp] C - 5 T vs. C 0.4 (T) 0.383 (C) <1 (-) 12 (-) >0.05
rs9266510 chr6:31341233 RNU6-283P [+3216bp] C - 10 T vs. C 0.333 (T) 0.267 (T) >1 (-) 8 (-) >0.05
rs34718458 chr6:31277595 HLA-C [+37688bp] C - 10 C vs. G 0.125 (C) 0.25 (C) <1 (-) 0 (-) >0.05
rs2596435 chr6:31338946 RNU6-283P [+929bp] C - 11 A vs. G 0.333 (G) 0.3 (G) <1 (-) 0 (-) >0.05
rs9468947 chr6:31278864 HLA-C [+38957bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs9266250 chr6:31325792 HLA-B [+827bp] C - 7 A vs. G 0.458 (A) 0.25 (A) >1 (-) 0 (-) >0.05
rs28600230 chr6:31275742 HLA-C [+35835bp] C - 11 A vs. G 0.025 (A) 0.175 (A) <1 (-) 7 (-) >0.05
rs116812356 chr6:31327669 HLA-B [+2704bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs9266642 chr6:31347201 RNU6-283P [+9184bp] C - 12 T vs. C 0.083 (T) 0.275 (T) <1 (-) 0 (-) >0.05
rs2844575 chr6:31334945 RNU6-283P [-2966bp] C - 12 T vs. C 0.467 (C) 0.483 (C) >1 (-) 0 (-) >0.05
rs111281598 chr6:31367874 MICA [-3482bp] C - 10 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs2923001 chr6:31339717 RNU6-283P [+1700bp] C - 10 A vs. G 0.342 (G) 0.308 (G) <1 (-) 10 (-) >0.05
rs9266257 chr6:31325886 HLA-B [+921bp] C - 7 C vs. G 0.367 (G) 0.208 (G) <1 (-) 0 (-) >0.05
rs3998320 chr6:31360059 MICA [-11297bp] C - 5 A vs. G - - >1 (-) 70 (-) >0.05
rs114607072 chr6:31351940 RNU6-283P [+13923bp] C - 8 T vs. G 0.033 (T) - <1 (-) 0 (-) >0.05
rs9266703 chr6:31349120 RNU6-283P [+11103bp] C - 12 A vs. G 0.083 (A) 0.25 (A) <1 (-) 0 (-) >0.05
rs9368677 chr6:31272321 HLA-C [+32414bp] C - 10 A vs. G 0.05 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs3132476 chr6:31284344 HLA-B [-37305bp] C - 3 A vs. G 0.25 (G) 0.158 (G) <1 (-) 0 (-) >0.05
rs3819294 chr6:31322487 HLA-B C - 3 A vs. G 0.075 (A) 0.142 (A) <1 (-) 55 (-) >0.05
rs115507472 chr6:31365969 MICA [-5387bp] C - 8 A vs. G - - >1 (-) 0 (-) >0.05
rs9357124 chr6:31273554 HLA-C [+33647bp] C - 11 A vs. C 0.05 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs7767632 chr6:31328109 HLA-B [+3144bp] C - 5 A vs. G - - <1 (-) 0 (-) >0.05
rs3819306 chr6:31322133 HLA-B C - 3 A vs. G 0.233 (G) 0.358 (G) >1 (-) 0 (-) >0.05
rs7767328 chr6:31328058 HLA-B [+3093bp] C - 5 C vs. G 0.058 (G) 0.108 (G) >1 (-) 0 (-) >0.05
rs17192582 chr6:31275982 HLA-C [+36075bp] C - 11 A vs. T 0.033 (T) 0.158 (T) <1 (-) 0 (-) >0.05
rs3094690 chr6:31282639 HLA-B [-39010bp] C - 3 T vs. C 0.242 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs9264984 chr6:31283224 HLA-B [-38425bp] C - 3 A vs. G 0.25 (G) 0.158 (G) <1 (-) 0 (-) >0.05
rs9266073 chr6:31319711 HLA-B [-1938bp] C - 6 A vs. T 0.475 (A) 0.242 (T) <1 (-) 0 (-) >0.05
rs2250399 chr6:31331095 HLA-B [+6130bp] C - 10 A vs. G 0.2 (A) 0.125 (A) <1 (-) 26 (-) >0.05
rs2250293 chr6:31330359 HLA-B [+5394bp] C - 10 T vs. C 0.2 (T) 0.125 (T) <1 (-) 26 (-) >0.05
rs2523568 chr6:31329932 HLA-B [+4967bp] C - 10 A vs. G 0.2 (A) 0.125 (A) <1 (-) 23 (-) >0.05

Association studies for this region [+]