HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2523537 chr6:31335707 RNU6-283P [-2204bp] C - 10 A vs. G 0.192 (A) 0.05 (A) >1 (-) 20 (-) <0.05
rs2523545 chr6:31333499 RNU6-283P [-4412bp] C - 12 A vs. G 0.425 (G) 0.108 (G) <1 (-) 50 (-) <0.05
rs115456947 chr6:31276647 HLA-C [+36740bp] C - 11 T vs. C 0.05 (T) - >1 (-) 12 (-) <0.05
rs2853991 chr6:31336812 RNU6-283P [-1099bp] C - 10 A vs. G 0.2 (A) 0.075 (A) >1 (-) 20 (-) <0.05
rs2854004 chr6:31313972 HLA-B [-7677bp] C - 5 A vs. G 0.392 (A) 0.383 (A) <1 (-) 0 (-) <0.05
rs2250292 chr6:31330334 HLA-B [+5369bp] C - 12 A vs. T 0.475 (A) 0.483 (T) <1 (-) 0 (-) <0.05
rs9266634 chr6:31346978 RNU6-283P [+8961bp] C - 12 A vs. T 0.433 (A) 0.383 (A) >1 (-) 0 (-) <0.05
rs2854006 chr6:31313591 HLA-B [-8058bp] C - 5 A vs. G 0.217 (A) 0.133 (A) >1 (-) 54 (-) <0.05
rs2854007 chr6:31313586 HLA-B [-8063bp] C - 5 A vs. G 0.217 (G) 0.133 (G) <1 (-) 54 (-) <0.05
rs9265929 chr6:31314313 HLA-B [-7336bp] C - 5 T vs. C 0.208 (C) 0.133 (C) <1 (-) 56 (-) <0.05
rs9266438 chr6:31337760 RNU6-283P [-151bp] C - 10 T vs. C 0.192 (C) 0.067 (C) <1 (-) 21 (-) <0.05
rs2508000 chr6:31314588 HLA-B [-7061bp] C - 5 T vs. C 0.217 (T) 0.133 (T) >1 (-) 54 (-) <0.05
rs9265953 chr6:31315312 HLA-B [-6337bp] C - 5 A vs. G 0.475 (G) 0.483 (A) >1 (-) 0 (-) <0.05
rs9266450 chr6:31338168 RNU6-283P [+151bp] C - 10 T vs. C 0.225 (T) - >1 (-) 20 (-) <0.05
rs9266441 chr6:31337816 RNU6-283P [-95bp] C - 10 A vs. G 0.2 (A) 0.075 (A) >1 (-) 21 (-) <0.05
rs2596524 chr6:31313906 HLA-B [-7743bp] C - 5 A vs. G 0.208 (A) 0.142 (A) >1 (-) 54 (-) <0.05
rs9265930 chr6:31314347 HLA-B [-7302bp] C - 5 A vs. C 0.217 (A) 0.133 (A) >1 (-) 54 (-) <0.05
rs2596522 chr6:31315755 HLA-B [-5894bp] C - 5 A vs. G 0.433 (A) 0.333 (A) >1 (-) 53 (-) <0.05
rs9264981 chr6:31280079 HLA-C [+40172bp] C - 5 T vs. C 0.425 (C) 0.267 (T) <1 (-) 0 (-) <0.05
rs9265975 chr6:31315891 HLA-B [-5758bp] C - 5 A vs. G 0.383 (A) 0.217 (A) >1 (-) 2 (-) <0.05
rs9264966 chr6:31277518 HLA-C [+37611bp] C - 7 T vs. C 0.217 (T) 0.2 (T) >1 (-) 8 (-) <0.05
rs9264965 chr6:31277493 HLA-C [+37586bp] C - 7 T vs. C 0.217 (C) 0.2 (C) <1 (-) 8 (-) <0.05
rs9266457 chr6:31338612 RNU6-283P [+595bp] C - 10 T vs. C - - <1 (-) 23 (-) <0.05
rs9266518 chr6:31341485 RNU6-283P [+3468bp] C - 9 T vs. G 0.225 (T) - >1 (-) 2 (-) <0.05
rs5028535 chr6:31278562 HLA-C [+38655bp] C - 7 T vs. G 0.217 (T) - >1 (-) 10 (-) <0.05
rs9264970 chr6:31278449 HLA-C [+38542bp] C - 7 A vs. T 0.217 (A) 0.183 (A) >1 (-) 11 (-) <0.05
rs73730049 chr6:31273743 HLA-C [+33836bp] C - 11 T vs. C 0.042 (T) - >1 (-) 5 (-) <0.05
rs9266459 chr6:31338645 RNU6-283P [+628bp] C - 10 A vs. G 0.192 (G) 0.092 (G) <1 (-) 17 (-) <0.05
rs9265459 chr6:31296680 HLA-B [-24969bp] C - 4 A vs. C 0.375 (A) 0.142 (A) >1 (-) 8 (-) <0.05
rs113997854 chr6:31272827 HLA-C [+32920bp] C - 12 T vs. C 0.05 (T) - >1 (-) 0 (-) <0.05
rs6918887 chr6:31272133 HLA-C [+32226bp] C - 12 A vs. G 0.05 (G) - <1 (-) 0 (-) <0.05
rs2442738 chr6:31346414 RNU6-283P [+8397bp] All: C 103,235 14 A vs. G 0.192 (A) 0.117 (A) 1.06 (1.01-1.10) 28 (0-62) 0.010
rs2596438 chr6:31339871 RNU6-283P [+1854bp] C - 10 A vs. G 0.192 (G) 0.083 (G) <1 (-) 25 (-) <0.05
rs2507988 chr6:31339294 RNU6-283P [+1277bp] C - 10 A vs. T - - >1 (-) 23 (-) <0.05
rs2596437 chr6:31339086 RNU6-283P [+1069bp] C - 10 A vs. G 0.2 (G) - <1 (-) 24 (-) <0.05
rs9265458 chr6:31296633 HLA-B [-25016bp] C - 4 C vs. G - - >1 (-) 39 (-) <0.05
rs2523612 chr6:31321123 HLA-B [-526bp] C - 8 T vs. G 0.2 (G) 0.025 (G) <1 (-) 27 (-) <0.05
rs9265941 chr6:31315053 HLA-B [-6596bp] C - 5 T vs. C - - >1 (-) 55 (-) <0.05
rs9265656 chr6:31300518 HLA-B [-21131bp] C - 3 T vs. G 0.225 (T) 0.133 (T) >1 (-) 68 (-) <0.05
rs2523518 chr6:31341128 RNU6-283P [+3111bp] C - 10 T vs. G 0.2 (T) 0.092 (T) >1 (-) 24 (-) <0.05
rs9265457 chr6:31296601 HLA-B [-25048bp] C - 4 T vs. C 0.475 (T) 0.483 (T) >1 (-) 40 (-) <0.05
rs9266479 chr6:31339420 RNU6-283P [+1403bp] C - 10 T vs. G 0.2 (T) - >1 (-) 23 (-) <0.05
rs73730053 chr6:31277826 HLA-C [+37919bp] C - 11 A vs. T 0.05 (A) - >1 (-) 11 (-) <0.05
rs2596434 chr6:31338761 RNU6-283P [+744bp] C - 10 A vs. G 0.225 (G) - <1 (-) 25 (-) <0.05
rs2844585 chr6:31321360 HLA-B [-289bp] C - 8 A vs. G 0.208 (A) 0.067 (A) >1 (-) 26 (-) <0.05
rs9266513 chr6:31341296 RNU6-283P [+3279bp] C - 10 A vs. G 0.192 (A) 0.083 (A) >1 (-) 25 (-) <0.05
rs9264980 chr6:31279956 HLA-C [+40049bp] C - 5 A vs. T 0.242 (A) 0.183 (A) >1 (-) 31 (-) <0.05
rs9264982 chr6:31280093 HLA-C [+40186bp] C - 5 A vs. G 0.25 (A) 0.175 (A) >1 (-) 31 (-) <0.05
rs7771432 chr6:31280750 HLA-C [+40843bp] C - 10 T vs. C 0.058 (T) - >1 (-) 18 (-) <0.05
rs1634785 chr6:31283297 HLA-B [-38352bp] C - 4 A vs. G 0.5 (G) 0.283 (G) <1 (-) 0 (-) <0.05

Association studies for this region [+]