HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9265997 chr6:31316609 HLA-B [-5040bp] C - 4 T vs. C 0.125 (T) - <1 (-) 17 (-) >0.05
rs9378199 chr6:31301658 HLA-B [-19991bp] C - 4 T vs. C 0.05 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs4992473 chr6:31318714 HLA-B [-2935bp] C - 7 T vs. G 0.167 (T) 0.217 (T) <1 (-) 0 (-) >0.05
rs9264924 chr6:31273301 HLA-C [+33394bp] C - 12 A vs. G 0.15 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs4521636 chr6:31312293 HLA-B [-9356bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs28752966 chr6:31306080 HLA-B [-15569bp] C - 3 T vs. C 0.417 (T) 0.433 (T) <1 (-) 0 (-) >0.05
rs28752965 chr6:31306063 HLA-B [-15586bp] C - 3 A vs. G 0.383 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs28752962 chr6:31305995 HLA-B [-15654bp] C - 3 A vs. G 0.417 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs28579725 chr6:31318482 HLA-B [-3167bp] C - 7 T vs. C 0.1 (C) 0.142 (C) >1 (-) 0 (-) >0.05
rs28752963 chr6:31306030 HLA-B [-15619bp] C - 3 A vs. T 0.417 (A) 0.442 (A) <1 (-) 0 (-) >0.05
rs1618199 chr6:31275850 HLA-C [+35943bp] C - 11 A vs. G 0.183 (A) 0.092 (A) >1 (-) 6 (-) >0.05
rs28366070 chr6:31320375 HLA-B [-1274bp] C - 6 A vs. C 0.15 (A) 0.117 (A) >1 (-) 0 (-) >0.05
rs2442714 chr6:31373260 MICA C - 12 C vs. G - - >1 (-) 13 (-) >0.05
rs9264939 chr6:31274289 HLA-C [+34382bp] C - 12 A vs. G 0.175 (A) 0.1 (A) >1 (-) 7 (-) >0.05
rs13193224 chr6:31317577 HLA-B [-4072bp] C - 7 T vs. G 0.1 (T) 0.142 (T) <1 (-) 0 (-) >0.05
rs6903496 chr6:31352774 RNU6-283P [+14757bp] C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs28752959 chr6:31305897 HLA-B [-15752bp] C - 3 C vs. G 0.417 (G) 0.433 (G) >1 (-) 0 (-) >0.05
rs1634786 chr6:31280592 HLA-C [+40685bp] C - 7 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs116138399 chr6:31325478 HLA-B [+513bp] C - 3 C vs. G 0.05 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs1811198 chr6:31319031 HLA-B [-2618bp] C - 7 T vs. G 0.117 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs9265903 chr6:31313482 HLA-B [-8167bp] C - 4 A vs. G 0.117 (G) - >1 (-) 1 (-) >0.05
rs2596509 chr6:31318413 HLA-B [-3236bp] C - 7 A vs. G 0.142 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs28380877 chr6:31312447 HLA-B [-9202bp] C - 4 C vs. G 0.125 (G) 0.175 (G) <1 (-) 3 (-) >0.05
rs3132480 chr6:31274677 HLA-C [+34770bp] C - 12 T vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs9266728 chr6:31350439 RNU6-283P [+12422bp] C - 5 T vs. C - - <1 (-) 0 (-) >0.05
rs4077381 chr6:31360021 MICA [-11335bp] C - 7 C vs. G - - >1 (-) 0 (-) >0.05
rs28380865 chr6:31312172 HLA-B [-9477bp] C - 4 T vs. C 0.067 (C) 0.117 (C) <1 (-) 0 (-) >0.05
rs4141166 chr6:31335323 RNU6-283P [-2588bp] C - 12 C vs. G 0.2 (C) 0.358 (C) >1 (-) 16 (-) >0.05
rs9264938 chr6:31274269 HLA-C [+34362bp] C - 12 A vs. T 0.183 (A) 0.108 (A) >1 (-) 9 (-) >0.05
rs9264937 chr6:31274267 HLA-C [+34360bp] C - 12 C vs. G 0.183 (G) 0.1 (G) <1 (-) 9 (-) >0.05
rs9468988 chr6:31359935 MICA [-11421bp] C - 7 A vs. G - - >1 (-) 0 (-) >0.05
rs114689053 chr6:31356650 MICA [-14706bp] C - 10 A vs. G 0.2 (G) 0.15 (G) >1 (-) 6 (-) >0.05
rs9265943 chr6:31315067 HLA-B [-6582bp] C - 4 A vs. T 0.175 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs28367830 chr6:31305640 HLA-B [-16009bp] C - 3 C vs. G 0.392 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs116427013 chr6:31356644 MICA [-14712bp] C - 10 T vs. G 0.2 (G) 0.158 (G) >1 (-) 6 (-) >0.05
rs117374116 chr6:31356635 MICA [-14721bp] C - 10 A vs. T - 0.1 (T) >1 (-) 6 (-) >0.05
rs28367829 chr6:31305629 HLA-B [-16020bp] C - 3 A vs. G 0.383 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs2853915 chr6:31275289 HLA-C [+35382bp] C - 11 A vs. C 0.342 (C) 0.1 (C) >1 (-) 31 (-) >0.05
rs9264947 chr6:31274647 HLA-C [+34740bp] C - 12 A vs. G 0.15 (A) - <1 (-) 0 (-) >0.05
rs28380885 chr6:31312694 HLA-B [-8955bp] C - 5 A vs. T 0.15 (A) 0.242 (A) >1 (-) 0 (-) >0.05
rs3094691 chr6:31274693 HLA-C [+34786bp] C - 11 A vs. G 0.425 (A) 0.375 (A) >1 (-) 0 (-) >0.05
rs3997961 chr6:31359466 MICA [-11890bp] C - 7 C vs. G 0.275 (C) 0.283 (C) <1 (-) 0 (-) >0.05
rs28752956 chr6:31305778 HLA-B [-15871bp] C - 3 T vs. G 0.4 (G) 0.458 (G) >1 (-) 0 (-) >0.05
rs28367821 chr6:31305383 HLA-B [-16266bp] C - 3 T vs. C 0.4 (T) 0.458 (T) <1 (-) 0 (-) >0.05
rs9266287 chr6:31328612 HLA-B [+3647bp] C - 6 A vs. G - - <1 (-) 0 (-) >0.05
rs2523624 chr6:31315671 HLA-B [-5978bp] C - 8 A vs. G 0.2 (A) 0.383 (A) >1 (-) 9 (-) >0.05
rs4713461 chr6:31347802 RNU6-283P [+9785bp] C - 11 T vs. C 0.042 (T) 0.075 (T) >1 (-) 0 (-) >0.05
rs2428485 chr6:31355366 MICA [-15990bp] C - 12 T vs. C 0.292 (T) 0.308 (T) <1 (-) 10 (-) >0.05
rs112142209 chr6:31368508 MICA [-2848bp] C - 11 A vs. G 0.017 (G) - >1 (-) 0 (-) >0.05
rs7775117 chr6:31345486 RNU6-283P [+7469bp] C - 11 A vs. T 0.167 (A) 0.275 (A) >1 (-) 19 (-) >0.05

Association studies for this region [+]