HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9264967 chr6:31277740 HLA-C [+37833bp] C - 10 A vs. G 0.15 (G) - >1 (-) 0 (-) >0.05
rs2596562 chr6:31354595 RNU6-283P [+16578bp] C - 12 T vs. C 0.283 (C) 0.308 (C) >1 (-) 11 (-) >0.05
rs28367822 chr6:31305405 HLA-B [-16244bp] C - 3 A vs. G 0.408 (G) 0.45 (G) >1 (-) 0 (-) >0.05
rs28380867 chr6:31312190 HLA-B [-9459bp] C - 4 A vs. G 0.083 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs4947313 chr6:31326203 HLA-B [+1238bp] C - 5 T vs. G - - <1 (-) 0 (-) >0.05
rs113000567 chr6:31341286 RNU6-283P [+3269bp] C - 8 A vs. C 0.033 (A) 0.067 (A) <1 (-) 0 (-) >0.05
rs2853973 chr6:31353992 RNU6-283P [+15975bp] C - 12 C vs. G 0.292 (C) 0.267 (C) <1 (-) 11 (-) >0.05
rs2523597 chr6:31326322 HLA-B [+1357bp] C - 7 T vs. G - - <1 (-) 36 (-) >0.05
rs7762513 chr6:31274000 HLA-C [+34093bp] C - 11 T vs. C 0.217 (T) 0.233 (T) >1 (-) 19 (-) >0.05
rs2428486 chr6:31354104 RNU6-283P [+16087bp] C - 12 T vs. C 0.292 (C) 0.317 (C) >1 (-) 11 (-) >0.05
rs28367820 chr6:31305328 HLA-B [-16321bp] C - 3 C vs. G 0.333 (G) 0.275 (G) >1 (-) 0 (-) >0.05
rs9265923 chr6:31314110 HLA-B [-7539bp] C - 4 A vs. G 0.175 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs9265922 chr6:31314107 HLA-B [-7542bp] C - 4 T vs. C 0.175 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs9266015 chr6:31317127 HLA-B [-4522bp] C - 4 A vs. G 0.15 (A) - <1 (-) 15 (-) >0.05
rs9266050 chr6:31319045 HLA-B [-2604bp] C - 4 A vs. G 0.175 (A) 0.175 (A) <1 (-) 5 (-) >0.05
rs4077382 chr6:31359950 MICA [-11406bp] C - 7 T vs. C - - >1 (-) 0 (-) >0.05
rs2394993 chr6:31359599 MICA [-11757bp] C - 6 T vs. C 0.208 (T) 0.267 (T) <1 (-) 0 (-) >0.05
rs2395491 chr6:31342420 RNU6-283P [+4403bp] C - 12 A vs. G 0.158 (A) 0.275 (A) >1 (-) 15 (-) >0.05
rs28367826 chr6:31305570 HLA-B [-16079bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs28367827 chr6:31305571 HLA-B [-16078bp] C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs28367828 chr6:31305577 HLA-B [-16072bp] C - 3 A vs. T 0.4 (A) 0.367 (A) <1 (-) 0 (-) >0.05
rs9266268 chr6:31326050 HLA-B [+1085bp] C - 4 A vs. G - - >1 (-) 0 (-) >0.05
rs2395484 chr6:31359595 MICA [-11761bp] C - 6 A vs. C 0.208 (A) 0.267 (A) <1 (-) 0 (-) >0.05
rs9266044 chr6:31318820 HLA-B [-2829bp] C - 4 A vs. C 0.183 (C) 0.175 (C) >1 (-) 3 (-) >0.05
rs9265867 chr6:31312790 HLA-B [-8859bp] C - 4 A vs. T 0.158 (T) 0.175 (T) >1 (-) 0 (-) >0.05
rs9265884 chr6:31313212 HLA-B [-8437bp] C - 4 T vs. C 0.292 (C) 0.217 (C) >1 (-) 0 (-) >0.05
rs114892859 chr6:31369278 MICA [-2078bp] C - 10 T vs. G 0.033 (T) - >1 (-) 14 (-) >0.05
rs2301750 chr6:31371342 MICA [-14bp] C - 10 C vs. G 0.033 (G) 0.083 (G) <1 (-) 14 (-) >0.05
rs9266286 chr6:31328342 HLA-B [+3377bp] C - 6 T vs. C 0.025 (T) - >1 (-) 0 (-) >0.05
rs115032094 chr6:31340001 RNU6-283P [+1984bp] C - 3 A vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs28367832 chr6:31305731 HLA-B [-15918bp] C - 3 A vs. G 0.408 (G) 0.433 (G) >1 (-) 0 (-) >0.05
rs9266067 chr6:31319544 HLA-B [-2105bp] C - 4 T vs. C 0.175 (C) 0.167 (C) >1 (-) 17 (-) >0.05
rs9266029 chr6:31317797 HLA-B [-3852bp] C - 5 C vs. G 0.175 (C) 0.175 (C) <1 (-) 0 (-) >0.05
rs28367831 chr6:31305714 HLA-B [-15935bp] C - 3 A vs. G 0.375 (A) 0.408 (A) <1 (-) 0 (-) >0.05
rs9501105 chr6:31360643 MICA [-10713bp] C - 6 A vs. C - - >1 (-) 3 (-) >0.05
rs28380868 chr6:31312194 HLA-B [-9455bp] C - 4 A vs. G 0.083 (A) 0.208 (A) >1 (-) 0 (-) >0.05
rs114708313 chr6:31329004 HLA-B [+4039bp] C - 6 A vs. T 0.042 (T) 0.125 (T) >1 (-) 0 (-) >0.05
rs2442728 chr6:31319355 HLA-B [-2294bp] C - 4 T vs. G 0.4 (T) 0.483 (T) >1 (-) 0 (-) >0.05
rs34087996 chr6:31329062 HLA-B [+4097bp] C - 6 A vs. C 0.05 (C) 0.083 (C) >1 (-) 0 (-) >0.05
rs2596561 chr6:31354820 MICA [-16536bp] C - 12 A vs. G 0.292 (G) 0.317 (G) >1 (-) 6 (-) >0.05
rs2844529 chr6:31353593 RNU6-283P [+15576bp] C - 12 A vs. G 0.292 (A) 0.317 (A) <1 (-) 11 (-) >0.05
rs9265881 chr6:31313087 HLA-B [-8562bp] C - 4 A vs. G 0.175 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs9391847 chr6:31319697 HLA-B [-1952bp] C - 7 A vs. G 0.192 (G) 0.375 (G) >1 (-) 18 (-) >0.05
rs9266039 chr6:31318464 HLA-B [-3185bp] C - 4 A vs. G 0.15 (A) - <1 (-) 19 (-) >0.05
rs116280898 chr6:31328957 HLA-B [+3992bp] C - 6 C vs. G 0.042 (C) 0.133 (C) <1 (-) 0 (-) >0.05
rs115497794 chr6:31328974 HLA-B [+4009bp] C - 6 A vs. G 0.042 (A) 0.125 (A) <1 (-) 0 (-) >0.05
rs9265882 chr6:31313101 HLA-B [-8548bp] C - 5 T vs. C 0.317 (C) 0.4 (C) <1 (-) 0 (-) >0.05
rs9265874 chr6:31312988 HLA-B [-8661bp] C - 4 C vs. G 0.175 (G) - >1 (-) 0 (-) >0.05
rs144626001 chr6:31374671 MICA C - 10 T vs. C - - >1 (-) 13 (-) >0.05
rs9266033 chr6:31317917 HLA-B [-3732bp] C - 5 T vs. C 0.175 (C) 0.175 (C) >1 (-) 0 (-) >0.05

Association studies for this region [+]