HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3094597 chr6:31350538 RNU6-283P [+12521bp] C - 12 A vs. G 0.3 (A) 0.108 (A) >1 (-) 23 (-) <0.05
rs2156875 chr6:31317347 HLA-B [-4302bp] C - 8 T vs. C 0.425 (C) 0.483 (T) <1 (-) 14 (-) <0.05
rs34265426 chr6:31325684 HLA-B [+719bp] C - 5 A vs. C 0.067 (A) 0.167 (A) <1 (-) 0 (-) <0.05
rs9266264 chr6:31325947 HLA-B [+982bp] C - 4 A vs. C 0.075 (C) 0.15 (C) <1 (-) 0 (-) <0.05
rs1614015 chr6:31278605 HLA-C [+38698bp] C - 7 T vs. C 0.492 (C) 0.342 (C) <1 (-) 54 (-) <0.05
rs2523622 chr6:31317232 HLA-B [-4417bp] C - 8 C vs. G 0.433 (G) 0.483 (C) <1 (-) 15 (-) <0.05
rs1523 chr6:31350755 RNU6-283P [+12738bp] C - 12 A vs. C 0.292 (C) 0.108 (C) <1 (-) 24 (-) <0.05
rs13199927 chr6:31328441 HLA-B [+3476bp] C - 5 T vs. G 0.075 (G) - <1 (-) 37 (-) <0.05
rs13214452 chr6:31328460 HLA-B [+3495bp] C - 5 C vs. G - - >1 (-) 37 (-) <0.05
rs1521 chr6:31350704 RNU6-283P [+12687bp] C - 12 T vs. C 0.283 (C) 0.108 (C) <1 (-) 24 (-) <0.05
rs13214113 chr6:31328400 HLA-B [+3435bp] C - 5 T vs. C 0.075 (T) 0.175 (T) >1 (-) 37 (-) <0.05
rs2844533 chr6:31350802 RNU6-283P [+12785bp] C - 12 A vs. G 0.275 (G) 0.108 (G) <1 (-) 24 (-) <0.05
rs3094596 chr6:31350579 RNU6-283P [+12562bp] C - 12 T vs. C 0.292 (T) 0.108 (T) >1 (-) 23 (-) <0.05
rs2507979 chr6:31350328 RNU6-283P [+12311bp] C - 12 A vs. G 0.275 (A) 0.108 (A) >1 (-) 25 (-) <0.05
rs9266714 chr6:31349615 RNU6-283P [+11598bp] C - 12 A vs. G 0.275 (G) 0.108 (G) <1 (-) 25 (-) <0.05
rs9266713 chr6:31349611 RNU6-283P [+11594bp] C - 12 A vs. G 0.275 (A) 0.092 (A) >1 (-) 25 (-) <0.05
rs9266043 chr6:31318630 HLA-B [-3019bp] C - 7 A vs. G 0.358 (A) 0.15 (A) >1 (-) 10 (-) <0.05
rs9266671 chr6:31348137 RNU6-283P [+10120bp] C - 12 T vs. G 0.267 (T) 0.108 (T) >1 (-) 26 (-) <0.05
rs2596573 chr6:31347930 RNU6-283P [+9913bp] C - 12 T vs. C 0.275 (C) 0.108 (C) <1 (-) 26 (-) <0.05
rs2596569 chr6:31350090 RNU6-283P [+12073bp] C - 12 T vs. C 0.283 (C) 0.108 (C) <1 (-) 25 (-) <0.05
rs2596568 chr6:31350232 RNU6-283P [+12215bp] C - 12 A vs. G 0.275 (A) 0.108 (A) >1 (-) 25 (-) <0.05
rs9266670 chr6:31348121 RNU6-283P [+10104bp] C - 12 A vs. G 0.292 (A) 0.108 (A) >1 (-) 26 (-) <0.05
rs9266694 chr6:31348653 RNU6-283P [+10636bp] C - 12 A vs. C 0.317 (C) 0.108 (C) <1 (-) 25 (-) <0.05
rs2596571 chr6:31348022 RNU6-283P [+10005bp] C - 12 C vs. G 0.275 (G) 0.108 (G) <1 (-) 27 (-) <0.05
rs9266672 chr6:31348164 RNU6-283P [+10147bp] C - 12 T vs. C 0.275 (C) 0.108 (C) <1 (-) 27 (-) <0.05
rs9405085 chr6:31326292 HLA-B [+1327bp] C - 5 A vs. G 0.067 (G) - >1 (-) 0 (-) <0.05
rs9266259 chr6:31325916 HLA-B [+951bp] C - 4 T vs. C 0.075 (T) 0.125 (T) >1 (-) 0 (-) <0.05
rs9266682 chr6:31348436 RNU6-283P [+10419bp] C - 12 T vs. C 0.275 (C) 0.108 (C) <1 (-) 27 (-) <0.05
rs9266685 chr6:31348507 RNU6-283P [+10490bp] C - 12 C vs. G 0.275 (C) 0.108 (C) >1 (-) 27 (-) <0.05
rs9266686 chr6:31348516 RNU6-283P [+10499bp] C - 12 A vs. G 0.275 (G) 0.108 (G) <1 (-) 27 (-) <0.05
rs2507999 chr6:31314646 HLA-B [-7003bp] C - 5 A vs. G 0.4 (A) 0.217 (A) >1 (-) 46 (-) <0.05
rs12662601 chr6:31328598 HLA-B [+3633bp] C - 5 T vs. C - - >1 (-) 38 (-) <0.05
rs9266690 chr6:31348609 RNU6-283P [+10592bp] C - 12 T vs. C 0.275 (C) 0.108 (C) <1 (-) 26 (-) <0.05
rs9266683 chr6:31348464 RNU6-283P [+10447bp] C - 12 A vs. G 0.275 (G) 0.108 (G) <1 (-) 26 (-) <0.05
rs9266675 chr6:31348321 RNU6-283P [+10304bp] C - 12 A vs. G 0.275 (G) 0.117 (G) <1 (-) 27 (-) <0.05
rs9266673 chr6:31348252 RNU6-283P [+10235bp] C - 12 C vs. G 0.275 (G) 0.117 (G) <1 (-) 27 (-) <0.05
rs9266674 chr6:31348304 RNU6-283P [+10287bp] C - 12 A vs. G 0.283 (A) 0.117 (A) >1 (-) 27 (-) <0.05
rs9266704 chr6:31349124 RNU6-283P [+11107bp] C - 12 A vs. G 0.3 (A) 0.117 (A) >1 (-) 25 (-) <0.05
rs73394251 chr6:31347608 RNU6-283P [+9591bp] C - 11 A vs. G 0.083 (A) 0.1 (A) <1 (-) 0 (-) <0.05
rs3094683 chr6:31296711 HLA-B [-24938bp] C - 3 A vs. G 0.15 (G) - <1 (-) 0 (-) <0.05
rs9266702 chr6:31349115 RNU6-283P [+11098bp] C - 12 T vs. C 0.275 (T) 0.108 (T) >1 (-) 27 (-) <0.05
rs3099850 chr6:31350464 RNU6-283P [+12447bp] C - 12 A vs. C 0.283 (C) 0.108 (C) <1 (-) 24 (-) <0.05
rs9266677 chr6:31348377 RNU6-283P [+10360bp] C - 12 A vs. G 0.283 (A) 0.108 (A) >1 (-) 29 (-) <0.05
rs9265488 chr6:31297319 HLA-B [-24330bp] C - 4 A vs. G - - >1 (-) 53 (-) <0.05
rs9266618 chr6:31346166 RNU6-283P [+8149bp] C - 12 A vs. C 0.108 (C) - <1 (-) 37 (-) <0.05
rs9265715 chr6:31302009 HLA-B [-19640bp] C - 4 C vs. G 0.4 (G) 0.492 (C) <1 (-) 40 (-) <0.05
rs9265476 chr6:31297032 HLA-B [-24617bp] C - 4 A vs. G 0.45 (G) 0.492 (G) <1 (-) 54 (-) <0.05
rs9265478 chr6:31297118 HLA-B [-24531bp] C - 4 C vs. G 0.458 (C) 0.492 (C) >1 (-) 55 (-) <0.05
rs2523589 chr6:31327334 HLA-B [+2369bp] C - 9 T vs. G 0.5 (G) 0.442 (G) <1 (-) 0 (-) <0.05
rs28520918 chr6:31275846 HLA-C [+35939bp] C - 11 A vs. C 0.05 (A) 0.35 (A) <1 (-) 18 (-) <0.05

Association studies for this region [+]