HLA-B, chr6:31321649-31324965 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3997869 - HLA-B All: C 105,041 14 C vs. T - - 1.18 (1.13-1.24) 37 (0-67) 1.94e-11
Meta_image?name=rs3997869

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2507982 chr6:31346193 RNU6-283P [+8176bp] C - 12 A vs. G 0.192 (G) 0.025 (G) <1 (-) 37 (-) >0.05
rs114615123 chr6:31352564 RNU6-283P [+14547bp] C - 9 T vs. C 0.033 (T) - >1 (-) 57 (-) >0.05
rs3997982 chr6:31344294 RNU6-283P [+6277bp] C - 12 A vs. T 0.192 (T) 0.117 (T) <1 (-) 39 (-) >0.05
rs34955377 chr6:31329197 HLA-B [+4232bp] C - 6 A vs. G - - >1 (-) 40 (-) >0.05
rs9266046 chr6:31318978 HLA-B [-2671bp] C - 8 C vs. G 0.433 (C) 0.458 (C) <1 (-) 0 (-) >0.05
rs9265711 chr6:31301905 HLA-B [-19744bp] C - 4 A vs. G 0.45 (G) 0.492 (G) <1 (-) 46 (-) >0.05
rs9265940 chr6:31315033 HLA-B [-6616bp] C - 5 A vs. G 0.458 (G) 0.383 (G) <1 (-) 0 (-) >0.05
rs2523528 chr6:31338854 RNU6-283P [+837bp] C - 10 T vs. G - - <1 (-) 0 (-) >0.05
rs2853984 chr6:31338886 RNU6-283P [+869bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs3997903 chr6:31342061 RNU6-283P [+4044bp] C - 12 T vs. C - - <1 (-) 32 (-) >0.05
rs9265708 chr6:31301878 HLA-B [-19771bp] C - 4 A vs. G - - >1 (-) 47 (-) >0.05
rs9265707 chr6:31301876 HLA-B [-19773bp] C - 4 A vs. T - - >1 (-) 47 (-) >0.05
rs9366782 chr6:31328545 HLA-B [+3580bp] C - 6 A vs. T 0.083 (T) 0.167 (T) >1 (-) 0 (-) >0.05
rs5025314 chr6:31343710 RNU6-283P [+5693bp] C - 12 T vs. C 0.367 (T) 0.4 (T) >1 (-) 0 (-) >0.05
rs2523488 chr6:31350855 RNU6-283P [+12838bp] C - 12 T vs. C 0.2 (T) 0.075 (T) >1 (-) 36 (-) >0.05
rs116285304 chr6:31368391 MICA [-2965bp] C - 9 A vs. T 0.033 (T) - <1 (-) 47 (-) >0.05
rs146482045 chr6:31367052 MICA [-4304bp] C - 9 T vs. G - - <1 (-) 63 (-) >0.05
rs2523486 chr6:31350943 RNU6-283P [+12926bp] C - 12 T vs. C 0.192 (T) 0.075 (T) >1 (-) 36 (-) >0.05
rs11962586 chr6:31271703 HLA-C [+31796bp] C - 11 A vs. T 0.067 (T) - >1 (-) 22 (-) >0.05
rs76756158 chr6:31363055 MICA [-8301bp] C - 5 T vs. C - - >1 (-) 29 (-) >0.05
rs77500217 chr6:31363056 MICA [-8300bp] C - 5 A vs. G - - <1 (-) 29 (-) >0.05
rs3130485 chr6:31351338 RNU6-283P [+13321bp] C - 12 A vs. G 0.192 (A) 0.067 (A) >1 (-) 36 (-) >0.05
rs3099849 chr6:31351415 RNU6-283P [+13398bp] C - 12 A vs. G 0.192 (G) 0.075 (G) <1 (-) 36 (-) >0.05
rs2523487 chr6:31350875 RNU6-283P [+12858bp] C - 12 T vs. C 0.192 (T) 0.075 (T) >1 (-) 36 (-) >0.05
rs116135464 chr6:31370984 MICA [-372bp] C - 9 T vs. C 0.033 (T) - >1 (-) 47 (-) >0.05
rs2523534 chr6:31336349 RNU6-283P [-1562bp] C - 12 A vs. G 0.392 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs9265712 chr6:31301944 HLA-B [-19705bp] C - 4 A vs. C 0.417 (A) 0.317 (A) >1 (-) 42 (-) >0.05
rs9266452 chr6:31338303 RNU6-283P [+286bp] C - 12 T vs. C 0.342 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs9266528 chr6:31341685 RNU6-283P [+3668bp] C - 9 A vs. T 0.208 (A) - >1 (-) 0 (-) >0.05
rs111378467 chr6:31362760 MICA [-8596bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs2596546 chr6:31329386 HLA-B [+4421bp] C - 9 A vs. G 0.242 (G) 0.258 (G) >1 (-) 0 (-) >0.05
rs9266460 chr6:31338659 RNU6-283P [+642bp] C - 12 C vs. G 0.342 (G) 0.267 (G) <1 (-) 0 (-) >0.05
rs146683910 chr6:31335997 RNU6-283P [-1914bp] C - 6 T vs. C - - >1 (-) 74 (-) >0.05
rs2922997 chr6:31337281 RNU6-283P [-630bp] C - 12 A vs. G 0.392 (G) 0.408 (G) <1 (-) 0 (-) >0.05
rs9266747 chr6:31351214 RNU6-283P [+13197bp] C - 12 A vs. G 0.208 (G) 0.083 (G) <1 (-) 0 (-) >0.05
rs3997972 chr6:31359207 MICA [-12149bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs3997971 chr6:31359203 MICA [-12153bp] C - 4 A vs. G 0.283 (A) 0.275 (A) <1 (-) 0 (-) >0.05
rs9266721 chr6:31349819 RNU6-283P [+11802bp] C - 12 A vs. C 0.4 (C) 0.367 (C) <1 (-) 0 (-) >0.05
rs2523643 chr6:31342660 RNU6-283P [+4643bp] C - 12 A vs. G 0.367 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2395483 chr6:31359193 MICA [-12163bp] C - 6 A vs. G 0.208 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs9266071 chr6:31319620 HLA-B [-2029bp] C - 7 T vs. C 0.492 (T) 0.375 (C) <1 (-) 0 (-) >0.05
rs13194791 chr6:31275277 HLA-C [+35370bp] C - 11 A vs. G 0.125 (G) 0.375 (G) >1 (-) 18 (-) >0.05
rs6899872 chr6:31272644 HLA-C [+32737bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs6932730 chr6:31354182 RNU6-283P [+16165bp] C - 12 T vs. C 0.142 (C) 0.15 (C) >1 (-) 0 (-) >0.05
rs9265683 chr6:31301240 HLA-B [-20409bp] C - 4 T vs. C 0.383 (C) 0.142 (C) <1 (-) 39 (-) >0.05
rs2507987 chr6:31343033 RNU6-283P [+5016bp] C - 12 A vs. T 0.367 (A) 0.392 (A) >1 (-) 0 (-) >0.05
rs2507985 chr6:31343100 RNU6-283P [+5083bp] C - 12 A vs. C 0.375 (A) 0.4 (A) >1 (-) 0 (-) >0.05
rs115613847 chr6:31364812 MICA [-6544bp] C - 8 T vs. C 0.033 (T) - >1 (-) 53 (-) >0.05
rs2507986 chr6:31343080 RNU6-283P [+5063bp] C - 12 T vs. C 0.367 (C) 0.392 (C) <1 (-) 0 (-) >0.05
rs9266538 chr6:31341918 RNU6-283P [+3901bp] C - 9 T vs. C - - >1 (-) 0 (-) >0.05

Association studies for this region [+]