HLA-C, chr6:31236526-31239907 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2853923 chr6:31265737 HLA-C [+25830bp] All: C 103,235 14 A vs. G 0.492 (A) 0.442 (A) 1.07 (1.04-1.11) 0 (0-47) 9.90e-06
Meta_image?name=rs2853923

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs116468348 chr6:31242369 HLA-C [+2462bp] C - 11 T vs. C 0.033 (T) - <1 (-) 1 (-) >0.05
rs28744271 chr6:31193798 HCG27 [+22053bp] C - 12 A vs. G 0.175 (G) - >1 (-) 0 (-) >0.05
rs2524048 chr6:31256561 HLA-C [+16654bp] C - 12 T vs. C 0.15 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs2853937 chr6:31252569 HLA-C [+12662bp] C - 12 T vs. C 0.15 (C) 0.1 (C) >1 (-) 0 (-) >0.05
rs2508008 chr6:31273497 HLA-C [+33590bp] C - 12 A vs. G 0.15 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs9264928 chr6:31273455 HLA-C [+33548bp] C - 12 T vs. C 0.15 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs9264671 chr6:31239752 HLA-C C - 9 T vs. C 0.417 (C) 0.317 (C) >1 (-) 0 (-) >0.05
rs396038 chr6:31272980 HLA-C [+33073bp] C - 12 T vs. C 0.15 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs28361000 chr6:31189498 HCG27 [+17753bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs396337 chr6:31272915 HLA-C [+33008bp] C - 12 A vs. C 0.15 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs1634795 chr6:31274014 HLA-C [+34107bp] C - 12 A vs. G 0.15 (A) - <1 (-) 0 (-) >0.05
rs2524043 chr6:31257012 HLA-C [+17105bp] C - 12 A vs. G 0.15 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs2844615 chr6:31242959 HLA-C [+3052bp] C - 12 T vs. C 0.15 (T) 0.083 (T) <1 (-) 0 (-) >0.05
rs2844596 chr6:31257376 HLA-C [+17469bp] C - 12 A vs. G 0.15 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs2853927 chr6:31257591 HLA-C [+17684bp] C - 12 T vs. C 0.15 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs1819788 chr6:31259137 HLA-C [+19230bp] C - 12 T vs. C 0.15 (C) 0.108 (C) >1 (-) 0 (-) >0.05
rs117308456 chr6:31218704 HLA-C [-17822bp] C - 5 A vs. G - 0.1 (A) >1 (-) 0 (-) >0.05
rs1946117 chr6:31252893 HLA-C [+12986bp] C - 12 C vs. G 0.15 (C) 0.067 (C) <1 (-) 0 (-) >0.05
rs9264881 chr6:31271870 HLA-C [+31963bp] C - 12 A vs. C 0.142 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs2524055 chr6:31252237 HLA-C [+12330bp] C - 12 A vs. C 0.15 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs2524083 chr6:31241737 HLA-C [+1830bp] C - 12 T vs. C 0.15 (T) - <1 (-) 0 (-) >0.05
rs2524155 chr6:31260739 HLA-C [+20832bp] C - 12 A vs. G 0.15 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs2844599 chr6:31256005 HLA-C [+16098bp] C - 12 C vs. G 0.15 (C) 0.092 (C) <1 (-) 0 (-) >0.05
rs9264886 chr6:31272030 HLA-C [+32123bp] C - 12 T vs. G 0.142 (G) 0.083 (G) >1 (-) 0 (-) >0.05
rs9264887 chr6:31272031 HLA-C [+32124bp] C - 12 A vs. G 0.142 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs3132481 chr6:31274661 HLA-C [+34754bp] C - 12 T vs. C 0.15 (C) - >1 (-) 0 (-) >0.05
rs12216025 chr6:31247319 HLA-C [+7412bp] C - 12 T vs. C - - >1 (-) 26 (-) >0.05
rs12208888 chr6:31247430 HLA-C [+7523bp] C - 12 T vs. C 0.083 (T) 0.058 (T) <1 (-) 26 (-) >0.05
rs28360999 chr6:31189219 HCG27 [+17474bp] C - 12 A vs. G 0.142 (A) - <1 (-) 0 (-) >0.05
rs2524047 chr6:31256591 HLA-C [+16684bp] C - 12 A vs. G 0.15 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs2844597 chr6:31256923 HLA-C [+17016bp] C - 12 T vs. G 0.15 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs9264767 chr6:31250195 HLA-C [+10288bp] C - 12 A vs. G 0.15 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs2524056 chr6:31252216 HLA-C [+12309bp] C - 12 A vs. C 0.15 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs28744259 chr6:31187334 HCG27 [+15589bp] C - 12 A vs. C 0.142 (A) - <1 (-) 0 (-) >0.05
rs9264925 chr6:31273310 HLA-C [+33403bp] C - 12 A vs. T 0.15 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs9264926 chr6:31273317 HLA-C [+33410bp] C - 12 T vs. G 0.15 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs12209312 chr6:31244711 HLA-C [+4804bp] C - 12 A vs. C 0.083 (C) 0.042 (C) >1 (-) 24 (-) >0.05
rs9264924 chr6:31273301 HLA-C [+33394bp] C - 12 A vs. G 0.15 (A) 0.092 (A) <1 (-) 0 (-) >0.05
rs114392121 chr6:31260185 HLA-C [+20278bp] C - 12 T vs. C 0.05 (C) 0.092 (C) <1 (-) 13 (-) >0.05
rs2844618 chr6:31242439 HLA-C [+2532bp] C - 12 T vs. C 0.15 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs2524135 chr6:31268930 HLA-C [+29023bp] C - 12 A vs. G 0.15 (A) - <1 (-) 0 (-) >0.05
rs35235581 chr6:31260105 HLA-C [+20198bp] C - 12 A vs. G 0.067 (A) 0.108 (A) >1 (-) 13 (-) >0.05
rs112056872 chr6:31192675 HCG27 [+20930bp] C - 12 A vs. T 0.158 (T) 0.075 (T) >1 (-) 5 (-) >0.05
rs2853930 chr6:31255424 HLA-C [+15517bp] C - 12 A vs. C 0.15 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs28744263 chr6:31188053 HCG27 [+16308bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs2524050 chr6:31255541 HLA-C [+15634bp] C - 12 T vs. C 0.15 (C) 0.092 (C) >1 (-) 0 (-) >0.05
rs2524051 chr6:31255500 HLA-C [+15593bp] C - 12 A vs. G 0.15 (G) 0.092 (G) >1 (-) 0 (-) >0.05
rs2853929 chr6:31255434 HLA-C [+15527bp] C - 12 T vs. C 0.15 (T) 0.092 (T) <1 (-) 0 (-) >0.05
rs2853934 chr6:31253928 HLA-C [+14021bp] C - 12 A vs. T 0.15 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs2853932 chr6:31254497 HLA-C [+14590bp] C - 12 A vs. C 0.15 (A) 0.092 (A) <1 (-) 0 (-) >0.05

Association studies for this region [+]