HLA-DMB, chr6:32902406-32908847 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs449073 chr6:32910482 HLA-DMB [+1635bp] All: C 103,235 14 G vs. T 0.392 (G) 0.25 (G) 0.92 (0.88-0.95) 0 (0-46) 1.75e-06
Meta_image?name=rs449073

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs449073 chr6:32910482 HLA-DMB [+1635bp] All: C 103,235 14 G vs. T 0.392 (G) 0.25 (G) 0.92 (0.88-0.95) 0 (0-46) 1.75e-06
rs114463908 chr6:32891884 HLA-DMB [-10522bp] All: C 103,235 14 A vs. G 0.1 (A) - 0.86 (0.80-0.92) 0 (0-52) 6.69e-06
rs206775 chr6:32954634 BRD2 [+5352bp] All: C 103,235 14 C vs. A 0.433 (C) 0.275 (C) 0.93 (0.90-0.96) 5 (0-57) 9.06e-06
rs206781 chr6:32946133 BRD2 All: C 103,235 14 C vs. T 0.425 (C) 0.275 (C) 0.93 (0.90-0.96) 15 (0-54) 1.22e-05
rs209476 chr6:32928310 HLA-DMA All: C 103,235 14 G vs. A - - 1.08 (1.04-1.12) 0 (0-50) 1.22e-05
rs209475 chr6:32925585 HLA-DMA All: C 103,235 14 A vs. G 0.392 (A) 0.45 (A) 0.93 (0.90-0.96) 0 (0-39) 1.47e-05
rs176249 chr6:32952708 BRD2 [+3426bp] All: C 103,235 14 A vs. G 0.425 (A) 0.283 (A) 0.93 (0.90-0.96) 5 (0-57) 2.06e-05
rs150360 chr6:32922078 HLA-DMA All: C 103,235 14 A vs. G 0.392 (A) 0.442 (A) 0.93 (0.90-0.96) 0 (0-44) 2.15e-05
rs129653 chr6:32931536 HLA-DMA All: C 103,235 14 C vs. T 0.392 (C) 0.442 (C) 0.93 (0.90-0.96) 0 (0-46) 2.27e-05
rs206784 chr6:32932567 HLA-DMA All: C 103,235 14 C vs. T - - 1.08 (1.04-1.11) 0 (0-44) 2.28e-05
rs3749981 chr6:32862682 PSMB9 [+35320bp] All: C 103,235 14 T vs. C 0.1 (T) 0.042 (T) 0.88 (0.82-0.93) 0 (0-46) 2.84e-05
rs683208 chr6:32937901 BRD2 All: C 103,235 14 C vs. T 0.392 (C) 0.442 (C) 0.93 (0.90-0.96) 0 (0-47) 3.18e-05
rs11908 chr6:32944746 BRD2 All: C 103,235 14 A vs. G 0.417 (A) 0.275 (A) 0.93 (0.90-0.96) 14 (0-52) 3.30e-05
rs565876 chr6:32950050 BRD2 [+768bp] All: C 103,235 14 A vs. G 0.425 (A) 0.275 (A) 0.93 (0.90-0.96) 14 (0-53) 3.31e-05
rs184054 chr6:32949962 BRD2 [+680bp] All: C 103,235 14 T vs. G 0.425 (T) 0.275 (T) 0.93 (0.90-0.96) 14 (0-53) 3.47e-05
rs189865 chr6:32914330 HLA-DMA [-2060bp] All: C 103,235 14 T vs. C 0.375 (T) 0.442 (T) 0.93 (0.90-0.96) 0 (0-20) 4.27e-05
rs209474 chr6:32924584 HLA-DMA All: C 103,235 14 G vs. A 0.442 (G) 0.442 (G) 0.94 (0.91-0.97) 0 (0-52) 4.29e-05
rs194682 chr6:32914613 HLA-DMA [-1777bp] All: C 103,235 14 T vs. C 0.375 (T) 0.433 (T) 0.93 (0.90-0.97) 0 (0-10) 5.41e-05
rs150358 chr6:32919524 HLA-DMA All: C 103,235 14 G vs. A - - 1.07 (1.04-1.11) 0 (0-15) 5.80e-05
rs206783 chr6:32932150 HLA-DMA All: C 103,235 14 A vs. C 0.442 (A) 0.45 (A) 0.94 (0.91-0.97) 2 (0-56) 6.88e-05
rs241409 chr6:32861920 PSMB9 [+34558bp] All: C 103,235 14 G vs. A 0.117 (G) 0.083 (G) 0.89 (0.85-0.94) 0 (0-33) 7.23e-05
rs471279 chr6:32957156 BRD2 [+7874bp] All: C 103,235 14 A vs. G 0.433 (A) 0.45 (A) 1.07 (1.03-1.10) 0 (0-49) 7.87e-05
rs241407 chr6:32862740 PSMB9 [+35378bp] All: C 103,235 14 T vs. C 0.117 (T) 0.083 (T) 0.89 (0.85-0.95) 0 (0-33) 7.90e-05
rs628235 chr6:32957063 BRD2 [+7781bp] All: C 103,235 14 T vs. C 0.442 (T) 0.45 (T) 1.07 (1.03-1.10) 0 (0-49) 7.90e-05
rs206786 chr6:32935179 HLA-DMA All: C 103,235 14 C vs. A 0.442 (C) 0.45 (C) 0.94 (0.91-0.97) 0 (0-54) 8.14e-05
rs206776 chr6:32953711 BRD2 [+4429bp] All: C 103,235 14 T vs. C 0.308 (T) 0.367 (T) 1.07 (1.04-1.11) 0 (0-30) 8.40e-05
rs28724904 chr6:32950382 BRD2 [+1100bp] All: C 103,235 14 C vs. T 0.025 (C) - 1.18 (1.08-1.28) 22 (0-58) 1.19e-04
rs497058 chr6:32956720 BRD2 [+7438bp] All: C 103,235 14 C vs. T - - 0.94 (0.91-0.97) 0 (0-47) 1.72e-04
rs28724901 chr6:32852519 PSMB9 [+25157bp] All: C 103,235 14 T vs. C 0.033 (T) - 1.18 (1.08-1.28) 54 (17-75) 2.36e-04
rs10947364 chr6:32958161 BRD2 [+8879bp] All: C 103,235 14 G vs. A - - 0.94 (0.91-0.97) 0 (0-54) 2.43e-04
rs3130598 chr6:32957842 BRD2 [+8560bp] All: C 103,235 14 A vs. G 0.475 (A) 0.467 (A) 1.06 (1.03-1.09) 2 (0-56) 3.73e-04
rs496160 chr6:32956787 BRD2 [+7505bp] C - 12 T vs. C - - >1 (-) 0 (-) <0.05
rs28724902 chr6:32869624 HLA-DMB [-32782bp] All: C 103,235 14 T vs. G - - 0.87 (0.80-0.94) 53 (13-74) 4.56e-04
rs579615 chr6:32957419 BRD2 [+8137bp] All: C 103,235 14 C vs. T 0.417 (C) 0.433 (C) 1.06 (1.03-1.09) 0 (0-54) 4.87e-04
rs129654 chr6:32916699 HLA-DMA All: C 103,235 14 T vs. C 0.175 (T) 0.2 (T) 1.07 (1.03-1.11) 0 (0-47) 5.47e-04
rs206777 chr6:32952546 BRD2 [+3264bp] All: C 103,235 14 G vs. A 0.417 (G) 0.433 (G) 1.06 (1.03-1.09) 0 (0-54) 5.58e-04
rs206785 chr6:32934441 HLA-DMA All: C 103,235 14 A vs. G 0.417 (A) 0.433 (A) 1.06 (1.02-1.09) 0 (0-51) 6.47e-04
rs28724903 chr6:32924061 HLA-DMA All: C 103,235 14 T vs. C 0.083 (T) 0.15 (T) 1.10 (1.04-1.16) 46 (0-71) 6.78e-04
rs35546426 chr6:32925590 HLA-DMA All: C 103,235 14 G vs. T 0.092 (G) 0.183 (G) 1.10 (1.04-1.16) 45 (0-71) 7.10e-04
rs485502 chr6:32943345 BRD2 All: C 103,235 14 C vs. T 0.467 (C) 0.45 (T) 1.06 (1.02-1.09) 0 (0-43) 7.78e-04
rs79643712 chr6:32938911 BRD2 C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) <0.05
rs516535 chr6:32942302 BRD2 All: C 103,235 14 G vs. A 0.417 (G) 0.433 (G) 1.06 (1.02-1.09) 0 (0-51) 0.001
rs3130599 chr6:32957904 BRD2 [+8622bp] C - 12 A vs. T 0.475 (T) 0.467 (A) >1 (-) 13 (-) <0.05
rs206778 chr6:32946964 BRD2 C - 12 A vs. G - - <1 (-) 0 (-) <0.05
rs206787 chr6:32936238 HLA-DMA C - 12 A vs. T 0.442 (A) 0.433 (A) >1 (-) 0 (-) <0.05
rs188245 chr6:32955976 BRD2 [+6694bp] C - 12 A vs. G 0.483 (A) 0.275 (G) >1 (-) 14 (-) <0.05
rs635688 chr6:32943151 BRD2 C - 12 T vs. C 0.433 (T) 0.442 (T) >1 (-) 0 (-) <0.05
rs3129299 chr6:32900787 HLA-DMB [-1619bp] C - 12 T vs. C 0.217 (T) 0.267 (T) <1 (-) 0 (-) <0.05
rs580962 chr6:32925692 HLA-DMA C - 11 T vs. C 0.417 (C) 0.433 (C) <1 (-) 4 (-) <0.05
rs206780 chr6:32946328 BRD2 C - 12 C vs. G 0.492 (G) 0.45 (C) <1 (-) 3 (-) <0.05

Association studies for this region [+]