HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17213770 chr6:32794830 TAP2 C - 9 C vs. G - - <1 (-) 3 (-) >0.05
rs9348894 chr6:32732677 HLA-DQB2 [+1366bp] C - 11 A vs. T 0.258 (T) 0.458 (T) <1 (-) 8 (-) >0.05
rs7742085 chr6:32746178 HLA-DQB2 [+14867bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs58781120 chr6:32815930 PSMB9 C - 12 T vs. C 0.017 (C) - <1 (-) 27 (-) >0.05
rs61627691 chr6:32815943 PSMB9 C - 12 T vs. C 0.025 (C) - <1 (-) 27 (-) >0.05
rs139428905 chr6:32773046 HLA-DOB [-7494bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs17501287 chr6:32783450 HLA-DOB C - 12 C vs. G 0.033 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs115086750 chr6:32771396 HLA-DOB [-9144bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs76440421 chr6:32783406 HLA-DOB C - 12 A vs. G 0.033 (A) - <1 (-) 0 (-) >0.05
rs28986377 chr6:32752222 HLA-DQB2 [+20911bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs60601161 chr6:32783387 HLA-DOB C - 11 T vs. C 0.017 (T) 0.083 (T) >1 (-) 0 (-) >0.05
rs17220171 chr6:32794907 TAP2 C - 9 A vs. G - - <1 (-) 3 (-) >0.05
rs1044043 chr6:32793981 TAP2 C - 12 A vs. C 0.242 (A) 0.2 (A) >1 (-) 41 (-) >0.05
rs9501662 chr6:32737007 HLA-DQB2 [+5696bp] C - 8 A vs. G - 0.025 (A) >1 (-) 0 (-) >0.05
rs2857112 chr6:32780294 HLA-DOB [-246bp] C - 12 A vs. T 0.058 (A) - <1 (-) 0 (-) >0.05
rs114140237 chr6:32773748 HLA-DOB [-6792bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs17220178 chr6:32794947 TAP2 C - 9 C vs. G - - <1 (-) 3 (-) >0.05
rs9368741 chr6:32737507 HLA-DQB2 [+6196bp] C - 12 A vs. G 0.225 (A) 0.442 (A) >1 (-) 3 (-) >0.05
rs2857208 chr6:32743103 HLA-DQB2 [+11792bp] C - 12 T vs. C 0.083 (C) - >1 (-) 0 (-) >0.05
rs2621330 chr6:32781524 HLA-DOB C - 12 T vs. C 0.058 (T) - <1 (-) 0 (-) >0.05
rs35921062 chr6:32774416 HLA-DOB [-6124bp] C - 12 T vs. C 0.042 (T) - <1 (-) 20 (-) >0.05
rs4148874 chr6:32797488 TAP2 C - 12 T vs. C 0.3 (C) 0.167 (C) <1 (-) 23 (-) >0.05
rs75797445 chr6:32747073 HLA-DQB2 [+15762bp] C - 6 T vs. C - - <1 (-) 28 (-) >0.05
rs2857105 chr6:32790059 TAP2 C - 12 T vs. C 0.058 (C) - >1 (-) 0 (-) >0.05
rs28986374 chr6:32752199 HLA-DQB2 [+20888bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28893532 chr6:32747817 HLA-DQB2 [+16506bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs76545695 chr6:32817293 PSMB9 C - 12 T vs. C - - >1 (-) 10 (-) >0.05
rs2071467 chr6:32805306 TAP2 C - 12 T vs. C 0.025 (T) 0.125 (T) >1 (-) 22 (-) >0.05
rs28893533 chr6:32747827 HLA-DQB2 [+16516bp] C - 12 T vs. G 0.083 (T) - >1 (-) 0 (-) >0.05
rs7451194 chr6:32735645 HLA-DQB2 [+4334bp] C - 12 T vs. C 0.25 (C) 0.45 (C) <1 (-) 3 (-) >0.05
rs2071537 chr6:32818991 PSMB9 C - 9 A vs. C - 0.1 (A) <1 (-) 0 (-) >0.05
rs117733615 chr6:32819642 PSMB9 C - 9 T vs. C - 0.092 (T) <1 (-) 0 (-) >0.05
rs28986391 chr6:32754294 HLA-DQB2 [+22983bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs72500555 chr6:32734862 HLA-DQB2 [+3551bp] C - 8 A vs. G - 0.025 (G) <1 (-) 0 (-) >0.05
rs2857209 chr6:32741918 HLA-DQB2 [+10607bp] C - 12 A vs. G 0.392 (A) 0.442 (A) >1 (-) 0 (-) >0.05
rs143683997 chr6:32738119 HLA-DQB2 [+6808bp] C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs6919798 chr6:32732890 HLA-DQB2 [+1579bp] C - 12 A vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs78184001 chr6:32792616 TAP2 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs115979309 chr6:32750575 HLA-DQB2 [+19264bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs9500908 chr6:32770666 HLA-DOB [-9874bp] C - 8 A vs. C - - >1 (-) 0 (-) >0.05
rs5019292 chr6:32733719 HLA-DQB2 [+2408bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9501209 chr6:32746518 HLA-DQB2 [+15207bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs28724892 chr6:32743488 HLA-DQB2 [+12177bp] C - 12 A vs. G - 0.425 (A) >1 (-) 0 (-) >0.05
rs17213735 chr6:32787308 TAP2 [-2302bp] C - 12 T vs. G 0.033 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs17213742 chr6:32787310 TAP2 [-2300bp] C - 12 A vs. G 0.033 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs17220136 chr6:32787337 TAP2 [-2273bp] C - 12 T vs. C 0.033 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs9501214 chr6:32771929 HLA-DOB [-8611bp] C - 8 A vs. T - - <1 (-) 0 (-) >0.05
rs2263320 chr6:32745936 HLA-DQB2 [+14625bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs41316241 chr6:32782795 HLA-DOB C - 12 A vs. C 0.05 (A) - <1 (-) 18 (-) >0.05
rs2857204 chr6:32744347 HLA-DQB2 [+13036bp] C - 12 T vs. G 0.383 (T) 0.45 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]