HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs111507231 chr6:32829387 PSMB9 [+2025bp] C - 12 T vs. G - - >1 (-) 19 (-) >0.05
rs241451 chr6:32796480 TAP2 C - 12 T vs. C 0.375 (C) 0.417 (C) <1 (-) 9 (-) >0.05
rs6925520 chr6:32793958 TAP2 C - 11 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs9276712 chr6:32759252 HLA-DOB [-21288bp] C - 12 A vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs28986397 chr6:32754458 HLA-DQB2 [+23147bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs28986396 chr6:32754430 HLA-DQB2 [+23119bp] C - 12 A vs. G 0.092 (A) 0.008 (A) >1 (-) 0 (-) >0.05
rs28986395 chr6:32754388 HLA-DQB2 [+23077bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs73412911 chr6:32814509 PSMB9 C - 12 A vs. G - - >1 (-) 7 (-) >0.05
rs12662462 chr6:32753433 HLA-DQB2 [+22122bp] C - 12 A vs. G 0.092 (A) - >1 (-) 0 (-) >0.05
rs12665315 chr6:32753403 HLA-DQB2 [+22092bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs2157080 chr6:32761826 HLA-DOB [-18714bp] C - 12 T vs. C 0.392 (T) 0.25 (T) <1 (-) 9 (-) >0.05
rs28893545 chr6:32750134 HLA-DQB2 [+18823bp] C - 12 A vs. C 0.092 (A) - >1 (-) 0 (-) >0.05
rs28893546 chr6:32750156 HLA-DQB2 [+18845bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs41550019 chr6:32816772 PSMB9 C - 12 A vs. C 0.017 (A) - >1 (-) 7 (-) >0.05
rs17220185 chr6:32794962 TAP2 C - 8 A vs. G - - <1 (-) 11 (-) >0.05
rs28893535 chr6:32749623 HLA-DQB2 [+18312bp] C - 12 T vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs55781304 chr6:32805095 TAP2 C - 11 T vs. C 0.008 (T) - >1 (-) 15 (-) >0.05
rs28893554 chr6:32750504 HLA-DQB2 [+19193bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs55865470 chr6:32814820 PSMB9 C - 12 T vs. G 0.017 (T) - >1 (-) 7 (-) >0.05
rs17213777 chr6:32794969 TAP2 C - 8 T vs. C - - <1 (-) 11 (-) >0.05
rs56672687 chr6:32828368 PSMB9 [+1006bp] C - 12 T vs. C 0.017 (T) - >1 (-) 18 (-) >0.05
rs7762120 chr6:32785284 HLA-DOB [+459bp] C - 12 T vs. C 0.042 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs73412927 chr6:32824232 PSMB9 C - 12 A vs. C 0.017 (A) - >1 (-) 18 (-) >0.05
rs11969467 chr6:32826553 PSMB9 C - 12 T vs. G - - <1 (-) 18 (-) >0.05
rs2857111 chr6:32783365 HLA-DOB C - 12 T vs. C 0.05 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs17220220 chr6:32816137 PSMB9 C - 12 T vs. C 0.017 (T) - >1 (-) 7 (-) >0.05
rs28986390 chr6:32753247 HLA-DQB2 [+21936bp] C - 12 A vs. T 0.092 (A) - >1 (-) 0 (-) >0.05
rs17213826 chr6:32816028 PSMB9 C - 12 T vs. C 0.008 (T) - >1 (-) 7 (-) >0.05
rs1057149 chr6:32814942 PSMB9 C - 12 T vs. C 0.017 (T) - >1 (-) 7 (-) >0.05
rs16871026 chr6:32815488 PSMB9 C - 12 A vs. G 0.017 (A) - >1 (-) 7 (-) >0.05
rs7749543 chr6:32751416 HLA-DQB2 [+20105bp] C - 12 A vs. G 0.333 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs111511638 chr6:32815025 PSMB9 C - 12 A vs. G - - >1 (-) 7 (-) >0.05
rs2127680 chr6:32818031 PSMB9 C - 12 A vs. G 0.025 (G) 0.008 (G) <1 (-) 33 (-) >0.05
rs2395270 chr6:32817797 PSMB9 C - 12 T vs. G - - >1 (-) 33 (-) >0.05
rs56397650 chr6:32817033 PSMB9 C - 12 T vs. G 0.025 (T) - >1 (-) 33 (-) >0.05
rs55827768 chr6:32805967 TAP2 C - 3 A vs. G - 0.008 (G) <1 (-) 64 (-) >0.05
rs16871027 chr6:32816663 PSMB9 C - 12 T vs. G 0.017 (T) - >1 (-) 7 (-) >0.05
rs56300566 chr6:32819001 PSMB9 C - 12 C vs. G 0.008 (C) - >1 (-) 31 (-) >0.05
rs72860329 chr6:32818505 PSMB9 C - 12 C vs. G 0.025 (C) 0.017 (C) >1 (-) 33 (-) >0.05
rs17220066 chr6:32775510 HLA-DOB [-5030bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs55960995 chr6:32818629 PSMB9 C - 12 A vs. T 0.025 (T) - <1 (-) 33 (-) >0.05
rs56093404 chr6:32818633 PSMB9 C - 12 T vs. C 0.025 (T) - >1 (-) 33 (-) >0.05
rs9276713 chr6:32759771 HLA-DOB [-20769bp] C - 12 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs2157078 chr6:32762226 HLA-DOB [-18314bp] C - 12 A vs. G 0.433 (A) 0.25 (A) <1 (-) 11 (-) >0.05
rs115353581 chr6:32826688 PSMB9 C - 12 T vs. G 0.008 (T) - >1 (-) 42 (-) >0.05
rs2857154 chr6:32762616 HLA-DOB [-17924bp] C - 12 A vs. G 0.392 (A) 0.25 (A) <1 (-) 13 (-) >0.05
rs28986389 chr6:32753205 HLA-DQB2 [+21894bp] C - 12 A vs. T 0.092 (T) - <1 (-) 0 (-) >0.05
rs111876139 chr6:32814489 PSMB9 C - 12 A vs. G - - >1 (-) 33 (-) >0.05
rs72860339 chr6:32820043 PSMB9 C - 12 A vs. G 0.025 (G) - <1 (-) 33 (-) >0.05
rs41561219 chr6:32816443 PSMB9 C - 12 T vs. C 0.025 (T) - >1 (-) 33 (-) >0.05

Association studies for this region [+]