HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
Meta_image?name=rs9276627

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs6457684 chr6:32814447 PSMB9 C - 12 T vs. C 0.425 (C) 0.275 (C) >1 (-) 29 (-) <0.05
rs9784858 chr6:32787175 HLA-DOB [+2350bp] C - 12 C vs. G 0.092 (C) 0.1 (C) <1 (-) 2 (-) <0.05
rs3763349 chr6:32808232 PSMB8 [-262bp] C - 11 A vs. G 0.492 (G) 0.417 (G) >1 (-) 12 (-) <0.05
rs73410783 chr6:32790630 TAP2 C - 12 T vs. C 0.067 (C) 0.058 (C) >1 (-) 0 (-) <0.05
rs2071544 chr6:32806121 TAP2 C - 12 T vs. C 0.45 (C) 0.425 (C) >1 (-) 0 (-) <0.05
rs2071465 chr6:32805470 TAP2 C - 12 C vs. G 0.417 (G) 0.192 (G) >1 (-) 25 (-) <0.05
rs719656 chr6:32752561 HLA-DQB2 [+21250bp] C - 12 A vs. C 0.033 (A) 0.142 (A) >1 (-) 0 (-) <0.05
rs10484565 chr6:32795032 TAP2 C - 12 A vs. G 0.083 (A) 0.1 (A) <1 (-) 0 (-) <0.05
rs3763366 chr6:32807446 TAP2 [+889bp] C - 12 C vs. G 0.458 (G) 0.408 (G) >1 (-) 2 (-) <0.05
rs17213861 chr6:32826267 PSMB9 C - 8 T vs. C - - >1 (-) 0 (-) <0.05
rs2071627 chr6:32809223 PSMB8 C - 12 A vs. C - 0.192 (A) <1 (-) 19 (-) <0.05
rs3763365 chr6:32807453 TAP2 [+896bp] C - 12 A vs. G 0.467 (G) 0.417 (G) >1 (-) 2 (-) <0.05
rs2071552 chr6:32806461 TAP2 C - 12 A vs. G 0.45 (G) 0.4 (G) >1 (-) 0 (-) <0.05
rs9380326 chr6:32798283 TAP2 C - 12 T vs. C 0.133 (C) 0.125 (C) <1 (-) 0 (-) <0.05
rs1055559 chr6:32832786 PSMB9 [+5424bp] C - 12 T vs. C 0.125 (C) 0.0 (C) <1 (-) 0 (-) >0.05
rs73410782 chr6:32790498 TAP2 C - 12 T vs. C 0.067 (T) 0.075 (T) <1 (-) 0 (-) >0.05
rs55869430 chr6:32803576 TAP2 C - 12 A vs. G 0.058 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs4148868 chr6:32806584 TAP2 [+27bp] C - 12 A vs. G 0.442 (A) 0.3 (A) <1 (-) 0 (-) >0.05
rs9276822 chr6:32829320 PSMB9 [+1958bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs6912056 chr6:32774274 HLA-DOB [-6266bp] C - 12 A vs. G 0.175 (A) 0.117 (A) <1 (-) 37 (-) >0.05
rs9380327 chr6:32798350 TAP2 C - 12 A vs. C 0.133 (C) 0.142 (C) <1 (-) 0 (-) >0.05
rs73410773 chr6:32789702 TAP2 C - 12 A vs. G 0.083 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs59377618 chr6:32788137 TAP2 [-1473bp] C - 12 T vs. C 0.108 (C) 0.167 (C) >1 (-) 0 (-) >0.05
rs62397687 chr6:32802009 TAP2 C - 12 T vs. C 0.167 (T) 0.183 (T) <1 (-) 0 (-) >0.05
rs2229527 chr6:32797309 TAP2 C - 12 T vs. G 0.067 (G) - >1 (-) 0 (-) >0.05
rs762808 chr6:32797466 TAP2 C - 12 A vs. G 0.075 (A) - <1 (-) 0 (-) >0.05
rs60772434 chr6:32789197 TAP2 [-413bp] C - 12 A vs. C 0.075 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs61299548 chr6:32788449 TAP2 [-1161bp] C - 12 C vs. G 0.075 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs59853218 chr6:32789168 TAP2 [-442bp] C - 12 T vs. C 0.083 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs73410776 chr6:32789955 TAP2 C - 12 T vs. C 0.075 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs73410775 chr6:32789742 TAP2 C - 12 T vs. C 0.075 (C) 0.042 (C) >1 (-) 0 (-) >0.05
rs73410780 chr6:32790438 TAP2 C - 12 T vs. C 0.067 (C) 0.067 (C) >1 (-) 0 (-) >0.05
rs57654360 chr6:32790982 TAP2 C - 12 T vs. C 0.075 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs58027204 chr6:32791139 TAP2 C - 12 T vs. C 0.075 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs116731949 chr6:32742762 HLA-DQB2 [+11451bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs140166904 chr6:32833269 PSMB9 [+5907bp] C - 3 T vs. C - - >1 (-) 0 (-) >0.05
rs73410787 chr6:32793255 TAP2 C - 12 C vs. G 0.05 (G) 0.058 (G) >1 (-) 0 (-) >0.05
rs16870907 chr6:32789807 TAP2 C - 12 T vs. C 0.075 (T) 0.058 (T) <1 (-) 0 (-) >0.05
rs4148872 chr6:32802807 TAP2 C - 12 T vs. C 0.183 (T) 0.142 (T) >1 (-) 4 (-) >0.05
rs2086399 chr6:32750370 HLA-DQB2 [+19059bp] C - 12 A vs. G 0.042 (G) - <1 (-) 0 (-) >0.05
rs3752430 chr6:32832667 PSMB9 [+5305bp] C - 12 T vs. C 0.475 (T) 0.483 (T) >1 (-) 22 (-) >0.05
rs9276821 chr6:32829304 PSMB9 [+1942bp] C - 12 A vs. G 0.475 (G) - <1 (-) 21 (-) >0.05
rs73410781 chr6:32790468 TAP2 C - 12 T vs. C 0.05 (A) 0.058 (C) >1 (-) 0 (-) >0.05
rs143613923 chr6:32764117 HLA-DOB [-16423bp] C - 5 T vs. C - - >1 (-) 0 (-) >0.05
rs16870908 chr6:32790089 TAP2 C - 12 A vs. G 0.067 (A) 0.058 (A) <1 (-) 0 (-) >0.05
chr6:32731345 chr6:32731345 HLA-DQB2 [+34bp] C - 7 C vs. G - - <1 (-) 0 (-) >0.05
chr6:32731360 chr6:32731360 HLA-DQB2 [+49bp] C - 7 T vs. C - - <1 (-) 0 (-) >0.05
rs201992526 chr6:32731192 HLA-DQB2 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs9784876 chr6:32788878 TAP2 [-732bp] C - 12 A vs. C 0.075 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs2621344 chr6:32773278 HLA-DOB [-7262bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05

Association studies for this region [+]