HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
Meta_image?name=rs9276627

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276628 chr6:32743861 HLA-DQB2 [+12550bp] C - 12 A vs. G 0.35 (G) 0.233 (G) >1 (-) 7 (-) >0.05
rs2157082 chr6:32760714 HLA-DOB [-19826bp] C - 12 T vs. G 0.475 (G) 0.258 (G) >1 (-) 16 (-) >0.05
rs9276615 chr6:32743217 HLA-DQB2 [+11906bp] C - 12 T vs. C 0.35 (C) 0.233 (C) >1 (-) 4 (-) >0.05
rs2071547 chr6:32785029 HLA-DOB [+204bp] C - 12 T vs. C 0.05 (C) 0.125 (C) >1 (-) 0 (-) >0.05
rs2857210 chr6:32741742 HLA-DQB2 [+10431bp] C - 12 A vs. G 0.35 (A) 0.292 (A) <1 (-) 11 (-) >0.05
rs2621326 chr6:32783896 HLA-DOB C - 12 A vs. G 0.433 (A) 0.392 (G) <1 (-) 0 (-) >0.05
rs2856995 chr6:32783337 HLA-DOB C - 12 A vs. T 0.433 (A) 0.392 (T) <1 (-) 0 (-) >0.05
rs2621380 chr6:32761353 HLA-DOB [-19187bp] C - 12 T vs. C 0.483 (C) 0.25 (C) >1 (-) 15 (-) >0.05
rs2857201 chr6:32745156 HLA-DQB2 [+13845bp] C - 12 C vs. G 0.342 (C) 0.233 (C) <1 (-) 10 (-) >0.05
rs2170183 chr6:32745324 HLA-DQB2 [+14013bp] C - 12 T vs. C 0.342 (T) 0.233 (T) <1 (-) 10 (-) >0.05
rs2857199 chr6:32746012 HLA-DQB2 [+14701bp] C - 12 A vs. G - - <1 (-) 13 (-) >0.05
rs116069146 chr6:32833563 PSMB9 [+6201bp] C - 12 T vs. C 0.008 (C) - >1 (-) 0 (-) >0.05
rs56020058 chr6:32816959 PSMB9 C - 12 T vs. C 0.017 (T) - >1 (-) 1 (-) >0.05
rs2621411 chr6:32744321 HLA-DQB2 [+13010bp] C - 12 T vs. C 0.367 (T) 0.233 (T) <1 (-) 9 (-) >0.05
rs56219567 chr6:32803574 TAP2 C - 11 A vs. G - - >1 (-) 15 (-) >0.05
rs2857205 chr6:32744145 HLA-DQB2 [+12834bp] C - 12 A vs. G 0.35 (A) 0.233 (A) <1 (-) 9 (-) >0.05
rs28893524 chr6:32746671 HLA-DQB2 [+15360bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs145420575 chr6:32761126 HLA-DOB [-19414bp] C - 11 T vs. C - - <1 (-) 12 (-) >0.05
rs141973979 chr6:32743732 HLA-DQB2 [+12421bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs138904557 chr6:32743754 HLA-DQB2 [+12443bp] C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs183585 chr6:32799673 TAP2 C - 12 A vs. G 0.183 (A) 0.317 (A) <1 (-) 0 (-) >0.05
rs2621406 chr6:32747959 HLA-DQB2 [+16648bp] C - 12 T vs. G 0.342 (G) 0.242 (G) >1 (-) 9 (-) >0.05
rs2857191 chr6:32747971 HLA-DQB2 [+16660bp] C - 12 A vs. G 0.35 (A) 0.242 (A) <1 (-) 9 (-) >0.05
rs719653 chr6:32752566 HLA-DQB2 [+21255bp] C - 12 T vs. C 0.342 (C) 0.233 (C) >1 (-) 7 (-) >0.05
rs9276693 chr6:32755937 HLA-DOB [-24603bp] C - 12 A vs. T - - >1 (-) 11 (-) >0.05
rs142092388 chr6:32745219 HLA-DQB2 [+13908bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs2857206 chr6:32744050 HLA-DQB2 [+12739bp] C - 12 A vs. G 0.358 (G) 0.233 (G) >1 (-) 11 (-) >0.05
rs2621419 chr6:32741006 HLA-DQB2 [+9695bp] C - 12 T vs. C 0.35 (T) 0.292 (T) <1 (-) 12 (-) >0.05
rs9276621 chr6:32743617 HLA-DQB2 [+12306bp] C - 12 A vs. G 0.417 (A) - <1 (-) 10 (-) >0.05
rs9276620 chr6:32743614 HLA-DQB2 [+12303bp] C - 12 A vs. G 0.408 (A) - <1 (-) 10 (-) >0.05
rs9276622 chr6:32743624 HLA-DQB2 [+12313bp] C - 12 T vs. G - - <1 (-) 11 (-) >0.05
rs2857194 chr6:32747273 HLA-DQB2 [+15962bp] C - 12 A vs. T 0.342 (A) 0.233 (A) <1 (-) 8 (-) >0.05
rs117186380 chr6:32741886 HLA-DQB2 [+10575bp] C - 10 A vs. G - 0.058 (G) <1 (-) 0 (-) >0.05
rs56294406 chr6:32798647 TAP2 C - 11 A vs. T 0.008 (T) 0.042 (T) >1 (-) 0 (-) >0.05
rs2857195 chr6:32747060 HLA-DQB2 [+15749bp] C - 12 T vs. C 0.342 (C) 0.233 (C) >1 (-) 10 (-) >0.05
rs2621390 chr6:32757453 HLA-DOB [-23087bp] C - 12 T vs. C 0.342 (C) 0.233 (C) >1 (-) 8 (-) >0.05
rs56034132 chr6:32823634 PSMB9 C - 12 T vs. C - - <1 (-) 11 (-) >0.05
rs36202977 chr6:32823354 PSMB9 C - 12 T vs. G - - <1 (-) 11 (-) >0.05
rs2857207 chr6:32743173 HLA-DQB2 [+11862bp] C - 12 A vs. G 0.383 (A) 0.275 (A) <1 (-) 7 (-) >0.05
rs9276657 chr6:32746674 HLA-DQB2 [+15363bp] C - 12 T vs. G - - <1 (-) 12 (-) >0.05
chr6:32785622 chr6:32785622 HLA-DOB [+797bp] C - 11 C vs. G - - >1 (-) 0 (-) >0.05
rs2621404 chr6:32748633 HLA-DQB2 [+17322bp] C - 12 C vs. G 0.35 (G) 0.233 (G) >1 (-) 11 (-) >0.05
rs17220199 chr6:32806029 TAP2 C - 4 C vs. G - - >1 (-) 46 (-) >0.05
rs117541316 chr6:32737757 HLA-DQB2 [+6446bp] C - 11 T vs. G - 0.1 (G) <1 (-) 0 (-) >0.05
rs9276674 chr6:32749704 HLA-DQB2 [+18393bp] C - 12 T vs. C 0.358 (T) - <1 (-) 12 (-) >0.05
chr6:32734144 chr6:32734144 HLA-DQB2 [+2833bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs146048758 chr6:32772397 HLA-DOB [-8143bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs7767680 chr6:32830417 PSMB9 [+3055bp] C - 12 T vs. C 0.267 (T) 0.142 (T) >1 (-) 0 (-) >0.05
rs150773494 chr6:32830403 PSMB9 [+3041bp] C - 9 C vs. G - - >1 (-) 0 (-) >0.05
rs2857172 chr6:32755023 HLA-DQB2 [+23712bp] C - 12 T vs. C 0.342 (T) 0.233 (T) <1 (-) 9 (-) >0.05

Association studies for this region [+]