HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs148857889 chr6:32736384 HLA-DQB2 [+5073bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs9501208 chr6:32746510 HLA-DQB2 [+15199bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs719652 chr6:32752577 HLA-DQB2 [+21266bp] C - 12 T vs. C 0.342 (C) 0.233 (C) >1 (-) 10 (-) >0.05
rs117907628 chr6:32739251 HLA-DQB2 [+7940bp] C - 11 A vs. T - 0.092 (A) >1 (-) 0 (-) >0.05
rs9296039 chr6:32735838 HLA-DQB2 [+4527bp] C - 12 A vs. G 0.35 (A) 0.242 (G) >1 (-) 22 (-) >0.05
rs149728623 chr6:32827940 PSMB9 [+578bp] C - 12 T vs. C - - <1 (-) 18 (-) >0.05
rs2621392 chr6:32757001 HLA-DOB [-23539bp] C - 12 T vs. C - - >1 (-) 4 (-) >0.05
rs57952004 chr6:32732585 HLA-DQB2 [+1274bp] C - 12 T vs. C 0.067 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs145751415 chr6:32827954 PSMB9 [+592bp] C - 12 A vs. G - - >1 (-) 18 (-) >0.05
rs9276639 chr6:32744667 HLA-DQB2 [+13356bp] C - 12 C vs. G - - <1 (-) 10 (-) >0.05
rs9276642 chr6:32744730 HLA-DQB2 [+13419bp] C - 12 A vs. G - - <1 (-) 7 (-) >0.05
rs115448877 chr6:32827993 PSMB9 [+631bp] C - 12 C vs. G - - >1 (-) 18 (-) >0.05
rs118156359 chr6:32739553 HLA-DQB2 [+8242bp] C - 11 A vs. G - 0.092 (G) <1 (-) 0 (-) >0.05
rs138445693 chr6:32829076 PSMB9 [+1714bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs143633171 chr6:32828140 PSMB9 [+778bp] C - 12 T vs. C - - >1 (-) 18 (-) >0.05
rs117181433 chr6:32739625 HLA-DQB2 [+8314bp] C - 11 T vs. C - 0.092 (C) <1 (-) 0 (-) >0.05
rs145484203 chr6:32819228 PSMB9 C - 5 T vs. G - - >1 (-) 31 (-) >0.05
rs36234338 chr6:32822887 PSMB9 C - 12 A vs. G - - >1 (-) 16 (-) >0.05
rs241417 chr6:32827916 PSMB9 [+554bp] C - 12 T vs. C 0.008 (C) - <1 (-) 0 (-) >0.05
rs142607998 chr6:32828157 PSMB9 [+795bp] C - 12 C vs. G - - >1 (-) 18 (-) >0.05
rs28724894 chr6:32758648 HLA-DOB [-21892bp] C - 12 A vs. G 0.033 (A) - >1 (-) 0 (-) >0.05
rs241420 chr6:32823393 PSMB9 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs241419 chr6:32823948 PSMB9 C - 12 A vs. G 0.017 (A) - >1 (-) 0 (-) >0.05
rs73739311 chr6:32764763 HLA-DOB [-15777bp] C - 12 T vs. C - 0.05 (T) >1 (-) 4 (-) >0.05
rs117443797 chr6:32735475 HLA-DQB2 [+4164bp] C - 11 T vs. G - 0.083 (G) <1 (-) 0 (-) >0.05
rs2857139 chr6:32775465 HLA-DOB [-5075bp] C - 12 C vs. G 0.392 (C) 0.25 (C) <1 (-) 16 (-) >0.05
rs62397690 chr6:32803613 TAP2 C - 12 T vs. C 0.017 (T) - <1 (-) 0 (-) >0.05
rs114113679 chr6:32828346 PSMB9 [+984bp] C - 12 T vs. C - - >1 (-) 19 (-) >0.05
rs73739316 chr6:32766406 HLA-DOB [-14134bp] C - 12 T vs. C - 0.058 (C) <1 (-) 5 (-) >0.05
rs9276705 chr6:32756833 HLA-DOB [-23707bp] C - 12 T vs. C 0.433 (T) 0.242 (T) >1 (-) 9 (-) >0.05
rs2857169 chr6:32757080 HLA-DOB [-23460bp] C - 12 A vs. T 0.358 (T) 0.233 (T) >1 (-) 10 (-) >0.05
rs9276634 chr6:32744466 HLA-DQB2 [+13155bp] C - 12 A vs. G 0.367 (G) 0.233 (G) >1 (-) 8 (-) >0.05
rs121917702 chr6:32814909 PSMB9 C - 10 T vs. C - - >1 (-) 0 (-) >0.05
rs115033676 chr6:32828444 PSMB9 [+1082bp] C - 12 A vs. G 0.017 (A) - >1 (-) 19 (-) >0.05
rs1158785 chr6:32758571 HLA-DOB [-21969bp] C - 12 T vs. C 0.433 (T) 0.25 (T) >1 (-) 5 (-) >0.05
rs2621386 chr6:32758268 HLA-DOB [-22272bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs2857164 chr6:32758219 HLA-DOB [-22321bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs117162283 chr6:32735434 HLA-DQB2 [+4123bp] C - 11 A vs. G - 0.083 (A) >1 (-) 0 (-) >0.05
rs9276703 chr6:32756794 HLA-DOB [-23746bp] C - 12 A vs. T - - >1 (-) 9 (-) >0.05
rs2170184 chr6:32738479 HLA-DQB2 [+7168bp] C - 12 A vs. G 0.35 (A) 0.35 (G) >1 (-) 29 (-) >0.05
rs13203581 chr6:32752546 HLA-DQB2 [+21235bp] C - 12 A vs. G 0.083 (G) - >1 (-) 0 (-) >0.05
rs149231735 chr6:32799685 TAP2 C - 6 C vs. G - - >1 (-) 0 (-) >0.05
rs76453595 chr6:32732201 HLA-DQB2 [+890bp] C - 11 A vs. G - 0.117 (G) >1 (-) 0 (-) >0.05
rs2621387 chr6:32757971 HLA-DOB [-22569bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs79433101 chr6:32732586 HLA-DQB2 [+1275bp] C - 11 A vs. G - 0.092 (A) <1 (-) 0 (-) >0.05
rs116892158 chr6:32732603 HLA-DQB2 [+1292bp] C - 11 A vs. C - 0.092 (C) >1 (-) 0 (-) >0.05
rs73404817 chr6:32732661 HLA-DQB2 [+1350bp] C - 11 A vs. G - 0.092 (G) >1 (-) 0 (-) >0.05
rs2239697 chr6:32782897 HLA-DOB C - 3 T vs. C - 0.058 (T) <1 (-) 0 (-) >0.05
rs2071463 chr6:32812528 PSMB9 C - 12 T vs. C 0.142 (T) 0.45 (T) >1 (-) 0 (-) >0.05
rs57361865 chr6:32734891 HLA-DQB2 [+3580bp] C - 11 T vs. C - 0.092 (T) >1 (-) 0 (-) >0.05

Association studies for this region [+]