HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17213693 chr6:32781121 HLA-DOB C - 12 C vs. G 0.05 (C) 0.033 (C) >1 (-) 0 (-) >0.05
rs200126619 chr6:32731165 HLA-DQB2 C - 3 C vs. G - - >1 (-) 0 (-) >0.05
rs117807149 chr6:32732156 HLA-DQB2 [+845bp] C - 11 A vs. T - 0.05 (A) >1 (-) 0 (-) >0.05
rs9276799 chr6:32778686 HLA-DOB [-1854bp] C - 12 C vs. G - - >1 (-) 17 (-) >0.05
rs2621348 chr6:32772575 HLA-DOB [-7965bp] C - 12 T vs. G 0.383 (T) - <1 (-) 18 (-) >0.05
rs2621407 chr6:32747569 HLA-DQB2 [+16258bp] C - 12 T vs. C 0.433 (C) 0.25 (C) >1 (-) 15 (-) >0.05
rs2857192 chr6:32747550 HLA-DQB2 [+16239bp] C - 12 A vs. T 0.433 (T) 0.25 (T) >1 (-) 15 (-) >0.05
rs2857183 chr6:32750982 HLA-DQB2 [+19671bp] C - 12 A vs. G 0.342 (A) 0.233 (A) <1 (-) 0 (-) >0.05
rs9276798 chr6:32778672 HLA-DOB [-1868bp] C - 12 T vs. C - - >1 (-) 17 (-) >0.05
rs17220087 chr6:32781076 HLA-DOB C - 12 A vs. C 0.058 (A) 0.108 (A) <1 (-) 0 (-) >0.05
rs9276653 chr6:32746414 HLA-DQB2 [+15103bp] C - 12 A vs. G - - <1 (-) 12 (-) >0.05
rs117996505 chr6:32737594 HLA-DQB2 [+6283bp] C - 11 T vs. C - 0.092 (T) >1 (-) 0 (-) >0.05
rs28892573 chr6:32750915 HLA-DQB2 [+19604bp] C - 12 A vs. G 0.033 (G) - <1 (-) 0 (-) >0.05
rs2621408 chr6:32747542 HLA-DQB2 [+16231bp] C - 12 C vs. G 0.408 (C) 0.25 (C) <1 (-) 18 (-) >0.05
rs6457657 chr6:32737104 HLA-DQB2 [+5793bp] C - 12 A vs. T 0.35 (A) 0.242 (T) >1 (-) 23 (-) >0.05
rs2071539 chr6:32818430 PSMB9 C - 12 C vs. G 0.008 (G) 0.108 (G) <1 (-) 0 (-) >0.05
rs2857193 chr6:32747528 HLA-DQB2 [+16217bp] C - 12 A vs. G 0.433 (G) 0.25 (G) <1 (-) 9 (-) >0.05
rs11575907 chr6:32782112 HLA-DOB C - 12 T vs. C 0.033 (T) - <1 (-) 0 (-) >0.05
rs2621405 chr6:32748039 HLA-DQB2 [+16728bp] C - 12 T vs. C 0.417 (C) 0.242 (C) <1 (-) 8 (-) >0.05
rs1825003 chr6:32736254 HLA-DQB2 [+4943bp] C - 12 A vs. G 0.35 (G) 0.242 (A) <1 (-) 22 (-) >0.05
rs140654840 chr6:32802938 TAP2 C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs62396667 chr6:32741158 HLA-DQB2 [+9847bp] C - 12 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2621421 chr6:32740671 HLA-DQB2 [+9360bp] C - 12 C vs. G 0.417 (G) 0.275 (G) <1 (-) 24 (-) >0.05
rs9276585 chr6:32731313 HLA-DQB2 [+2bp] C - 12 A vs. T 0.2 (A) - <1 (-) 0 (-) >0.05
rs2071466 chr6:32805307 TAP2 C - 12 T vs. C 0.275 (T) 0.108 (T) <1 (-) 0 (-) >0.05
rs6457661 chr6:32737494 HLA-DQB2 [+6183bp] C - 12 T vs. C 0.35 (T) 0.242 (C) <1 (-) 23 (-) >0.05
rs1894407 chr6:32787036 HLA-DOB [+2211bp] C - 12 A vs. C 0.4 (A) 0.467 (C) >1 (-) 0 (-) >0.05
rs6457656 chr6:32736978 HLA-DQB2 [+5667bp] C - 12 T vs. C 0.35 (C) 0.242 (T) >1 (-) 21 (-) >0.05
rs115454812 chr6:32739931 HLA-DQB2 [+8620bp] C - 10 A vs. G 0.008 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs2621394 chr6:32754409 HLA-DQB2 [+23098bp] C - 12 A vs. G 0.442 (A) - >1 (-) 11 (-) >0.05
rs6457658 chr6:32737149 HLA-DQB2 [+5838bp] C - 12 A vs. G 0.342 (A) 0.242 (G) >1 (-) 23 (-) >0.05
rs2857182 chr6:32751179 HLA-DQB2 [+19868bp] C - 12 A vs. G 0.433 (A) 0.233 (A) >1 (-) 5 (-) >0.05
rs7382236 chr6:32778622 HLA-DOB [-1918bp] C - 12 T vs. C 0.4 (T) 0.25 (T) <1 (-) 11 (-) >0.05
rs150953172 chr6:32744988 HLA-DQB2 [+13677bp] C - 6 T vs. C - - >1 (-) 20 (-) >0.05
rs6457659 chr6:32737183 HLA-DQB2 [+5872bp] C - 12 A vs. C 0.35 (C) 0.242 (A) >1 (-) 24 (-) >0.05
rs2857175 chr6:32754398 HLA-DQB2 [+23087bp] C - 12 A vs. G - - <1 (-) 8 (-) >0.05
rs6457655 chr6:32735506 HLA-DQB2 [+4195bp] C - 12 T vs. G 0.35 (G) 0.242 (T) >1 (-) 23 (-) >0.05
rs141143174 chr6:32787509 TAP2 [-2101bp] C - 7 T vs. C - - >1 (-) 30 (-) >0.05
rs2621420 chr6:32740761 HLA-DQB2 [+9450bp] C - 12 T vs. C 0.408 (T) 0.225 (T) <1 (-) 19 (-) >0.05
rs9296043 chr6:32736103 HLA-DQB2 [+4792bp] C - 12 T vs. C 0.35 (C) 0.233 (T) >1 (-) 24 (-) >0.05
rs9296044 chr6:32736144 HLA-DQB2 [+4833bp] C - 12 A vs. T 0.35 (A) 0.242 (T) <1 (-) 24 (-) >0.05
rs1585891 chr6:32736722 HLA-DQB2 [+5411bp] C - 12 T vs. C 0.35 (T) 0.242 (C) <1 (-) 24 (-) >0.05
rs9296041 chr6:32735861 HLA-DQB2 [+4550bp] C - 12 A vs. C 0.358 (C) 0.242 (A) >1 (-) 22 (-) >0.05
rs9296040 chr6:32735855 HLA-DQB2 [+4544bp] C - 12 A vs. G 0.35 (A) 0.242 (G) <1 (-) 22 (-) >0.05
rs9276584 chr6:32730835 HLA-DQB2 C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) >0.05
rs6457660 chr6:32737394 HLA-DQB2 [+6083bp] C - 12 T vs. G 0.35 (G) 0.242 (T) >1 (-) 23 (-) >0.05
rs7760779 chr6:32746464 HLA-DQB2 [+15153bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs115736014 chr6:32799817 TAP2 C - 11 A vs. G - - >1 (-) 0 (-) >0.05
rs9276613 chr6:32743192 HLA-DQB2 [+11881bp] C - 12 C vs. G 0.35 (C) 0.242 (C) <1 (-) 10 (-) >0.05
rs9276614 chr6:32743193 HLA-DQB2 [+11882bp] C - 12 A vs. G 0.367 (A) 0.242 (A) <1 (-) 10 (-) >0.05

Association studies for this region [+]