HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs1042116 chr6:32798548 TAP2 C - 12 A vs. G 0.142 (A) - >1 (-) 0 (-) >0.05
rs56221264 chr6:32824117 PSMB9 C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs3819721 chr6:32804798 TAP2 C - 12 A vs. G 0.275 (A) 0.217 (A) <1 (-) 26 (-) >0.05
rs2071540 chr6:32812916 PSMB9 C - 12 T vs. C 0.475 (T) 0.492 (T) >1 (-) 21 (-) >0.05
rs73410779 chr6:32790273 TAP2 C - 12 A vs. T 0.075 (T) 0.067 (T) >1 (-) 0 (-) >0.05
rs9784869 chr6:32788566 TAP2 [-1044bp] C - 12 T vs. G 0.075 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs115756946 chr6:32753791 HLA-DQB2 [+22480bp] C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs139464972 chr6:32750596 HLA-DQB2 [+19285bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs4148882 chr6:32816958 PSMB9 C - 11 A vs. G 0.408 (G) 0.492 (G) <1 (-) 22 (-) >0.05
rs1158784 chr6:32758761 HLA-DOB [-21779bp] C - 12 A vs. T 0.258 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs241440 chr6:32797361 TAP2 C - 11 T vs. C 0.308 (T) 0.358 (T) >1 (-) 0 (-) >0.05
rs3198005 chr6:32813214 PSMB9 C - 12 A vs. G 0.075 (A) - >1 (-) 0 (-) >0.05
rs241446 chr6:32796967 TAP2 C - 12 A vs. G 0.3 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs2857145 chr6:32771560 HLA-DOB [-8980bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs113025746 chr6:32790800 TAP2 C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs112707155 chr6:32790799 TAP2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs2071472 chr6:32784620 HLA-DOB C - 11 T vs. C 0.325 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs2621370 chr6:32768222 HLA-DOB [-12318bp] C - 12 T vs. G 0.175 (T) - >1 (-) 5 (-) >0.05
rs2857147 chr6:32770180 HLA-DOB [-10360bp] C - 12 T vs. C 0.342 (T) 0.367 (T) >1 (-) 0 (-) >0.05
rs9501663 chr6:32768474 HLA-DOB [-12066bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs241445 chr6:32797072 TAP2 C - 12 T vs. C 0.3 (T) 0.358 (T) >1 (-) 0 (-) >0.05
rs2621355 chr6:32771341 HLA-DOB [-9199bp] C - 12 A vs. G 0.25 (A) 0.317 (A) >1 (-) 0 (-) >0.05
rs2856993 chr6:32791403 TAP2 C - 12 C vs. G 0.2 (C) 0.283 (C) >1 (-) 0 (-) >0.05
rs2621365 chr6:32769140 HLA-DOB [-11400bp] C - 12 T vs. C 0.35 (T) 0.375 (T) >1 (-) 0 (-) >0.05
rs9276699 chr6:32756567 HLA-DOB [-23973bp] C - 12 A vs. T 0.308 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs2199873 chr6:32770125 HLA-DOB [-10415bp] C - 12 A vs. G 0.342 (G) 0.367 (G) <1 (-) 0 (-) >0.05
rs2857101 chr6:32794676 TAP2 C - 12 T vs. C 0.292 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs241444 chr6:32797109 TAP2 C - 12 A vs. G 0.308 (A) 0.35 (A) >1 (-) 0 (-) >0.05
rs241447 chr6:32796751 TAP2 C - 12 T vs. C 0.3 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs241441 chr6:32797297 TAP2 C - 12 T vs. C 0.308 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs9501664 chr6:32768488 HLA-DOB [-12052bp] C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs241449 chr6:32796653 TAP2 C - 12 A vs. C 0.3 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs241448 chr6:32796685 TAP2 C - 12 A vs. G 0.3 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs241452 chr6:32796346 TAP2 C - 12 T vs. C 0.3 (C) 0.358 (C) <1 (-) 0 (-) >0.05
rs241442 chr6:32797168 TAP2 C - 12 A vs. G 0.308 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs2621367 chr6:32768721 HLA-DOB [-11819bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs11961213 chr6:32767249 HLA-DOB [-13291bp] C - 4 A vs. G - 0.058 (A) <1 (-) 0 (-) >0.05
rs241454 chr6:32796144 TAP2 C - 12 A vs. G 0.3 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs2621360 chr6:32769575 HLA-DOB [-10965bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs719654 chr6:32752139 HLA-DQB2 [+20828bp] C - 12 A vs. G 0.225 (A) 0.3 (A) >1 (-) 1 (-) >0.05
rs2621368 chr6:32768333 HLA-DOB [-12207bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs241453 chr6:32796226 TAP2 C - 12 A vs. G 0.3 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs2219893 chr6:32769663 HLA-DOB [-10877bp] C - 12 T vs. C 0.342 (C) 0.375 (C) <1 (-) 0 (-) >0.05
rs241456 chr6:32795965 TAP2 C - 12 A vs. G 0.3 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs2621356 chr6:32771033 HLA-DOB [-9507bp] C - 12 A vs. G - - >1 (-) 0 (-) >0.05
rs241455 chr6:32796019 TAP2 C - 12 A vs. C 0.3 (A) 0.358 (A) >1 (-) 0 (-) >0.05
rs1480381 chr6:32775235 HLA-DOB [-5305bp] C - 12 A vs. T 0.342 (T) 0.367 (T) <1 (-) 0 (-) >0.05
rs2621372 chr6:32765302 HLA-DOB [-15238bp] C - 12 A vs. C 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2621364 chr6:32769204 HLA-DOB [-11336bp] C - 12 A vs. G 0.342 (A) 0.367 (A) >1 (-) 0 (-) >0.05
rs2199874 chr6:32769926 HLA-DOB [-10614bp] C - 12 A vs. G 0.342 (G) 0.375 (G) <1 (-) 0 (-) >0.05

Association studies for this region [+]