HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
Meta_image?name=rs9276627

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs241423 chr6:32818010 PSMB9 C - 12 A vs. G 0.05 (A) - <1 (-) 32 (-) >0.05
rs1871667 chr6:32834229 PSMB9 [+6867bp] C - 12 A vs. G 0.35 (G) 0.325 (G) <1 (-) 6 (-) >0.05
rs1383267 chr6:32833646 PSMB9 [+6284bp] C - 12 A vs. G 0.35 (A) 0.325 (A) >1 (-) 6 (-) >0.05
rs1383269 chr6:32833296 PSMB9 [+5934bp] C - 12 A vs. G 0.392 (G) 0.325 (G) <1 (-) 11 (-) >0.05
rs56157202 chr6:32823764 PSMB9 C - 10 A vs. G 0.008 (G) - <1 (-) 3 (-) >0.05
rs9276818 chr6:32828248 PSMB9 [+886bp] C - 12 T vs. G 0.35 (G) 0.325 (G) <1 (-) 3 (-) >0.05
rs241428 chr6:32804070 TAP2 C - 12 T vs. G 0.033 (G) - >1 (-) 28 (-) >0.05
rs9276827 chr6:32830904 PSMB9 [+3542bp] C - 12 A vs. G 0.35 (A) 0.325 (A) >1 (-) 4 (-) >0.05
rs34422230 chr6:32776995 HLA-DOB [-3545bp] C - 11 T vs. C 0.05 (C) - >1 (-) 35 (-) >0.05
rs2071482 chr6:32816700 PSMB9 C - 12 A vs. C 0.108 (A) 0.175 (A) >1 (-) 0 (-) >0.05
rs9276820 chr6:32829276 PSMB9 [+1914bp] C - 12 A vs. G 0.367 (A) 0.333 (A) >1 (-) 10 (-) >0.05
rs2071476 chr6:32825379 PSMB9 C - 12 A vs. G 0.367 (G) 0.333 (G) <1 (-) 12 (-) >0.05
rs7749454 chr6:32830262 PSMB9 [+2900bp] C - 12 T vs. C 0.342 (C) 0.308 (C) <1 (-) 19 (-) >0.05
rs1133896 chr6:32832817 PSMB9 [+5455bp] C - 12 A vs. G 0.35 (G) 0.317 (G) <1 (-) 6 (-) >0.05
rs117376195 chr6:32785373 HLA-DOB [+548bp] C - 12 A vs. G - 0.058 (A) <1 (-) 0 (-) >0.05
rs991760 chr6:32823567 PSMB9 C - 12 A vs. G 0.042 (A) 0.167 (A) >1 (-) 0 (-) >0.05
rs9276825 chr6:32829714 PSMB9 [+2352bp] C - 12 A vs. G 0.358 (A) 0.325 (A) >1 (-) 9 (-) >0.05
chr6:32732126 chr6:32732126 HLA-DQB2 [+815bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs9276824 chr6:32829538 PSMB9 [+2176bp] C - 12 A vs. G 0.35 (G) 0.325 (G) <1 (-) 10 (-) >0.05
rs9276819 chr6:32829102 PSMB9 [+1740bp] C - 12 A vs. G 0.35 (A) 0.325 (A) >1 (-) 4 (-) >0.05
rs9276830 chr6:32831756 PSMB9 [+4394bp] C - 12 A vs. G 0.35 (G) 0.308 (G) <1 (-) 11 (-) >0.05
rs7767288 chr6:32830013 PSMB9 [+2651bp] C - 12 A vs. G 0.35 (A) 0.325 (A) >1 (-) 6 (-) >0.05
rs3763346 chr6:32823257 PSMB9 C - 12 T vs. C 0.367 (C) 0.333 (C) <1 (-) 15 (-) >0.05
rs149548865 chr6:32733511 HLA-DQB2 [+2200bp] C - 12 A vs. T - - >1 (-) 0 (-) >0.05
rs241432 chr6:32802203 TAP2 C - 12 T vs. G 0.417 (G) 0.358 (G) <1 (-) 0 (-) >0.05
rs9276816 chr6:32826985 PSMB9 C - 12 T vs. C 0.333 (T) 0.325 (T) >1 (-) 5 (-) >0.05
rs2228396 chr6:32797809 TAP2 C - 12 T vs. C 0.083 (T) 0.083 (T) <1 (-) 13 (-) >0.05
rs17840184 chr6:32733390 HLA-DQB2 [+2079bp] C - 11 A vs. G - - <1 (-) 0 (-) >0.05
rs7766900 chr6:32830034 PSMB9 [+2672bp] C - 12 A vs. G 0.367 (G) 0.325 (G) <1 (-) 8 (-) >0.05
rs2071477 chr6:32825348 PSMB9 C - 12 T vs. C 0.35 (C) 0.325 (C) <1 (-) 6 (-) >0.05
rs9276823 chr6:32829429 PSMB9 [+2067bp] C - 12 A vs. G - - <1 (-) 14 (-) >0.05
rs4713600 chr6:32822858 PSMB9 C - 12 T vs. G 0.35 (T) 0.333 (T) >1 (-) 6 (-) >0.05
rs17213756 chr6:32787996 TAP2 [-1614bp] C - 12 T vs. C 0.05 (T) - <1 (-) 26 (-) >0.05
rs2071534 chr6:32824318 PSMB9 C - 12 T vs. C 0.367 (T) 0.342 (T) >1 (-) 13 (-) >0.05
rs3763347 chr6:32822975 PSMB9 C - 12 A vs. T 0.333 (A) 0.333 (A) >1 (-) 6 (-) >0.05
rs17583244 chr6:32804687 TAP2 C - 12 T vs. C 0.058 (C) - <1 (-) 32 (-) >0.05
rs3763348 chr6:32822907 PSMB9 C - 12 T vs. C - 0.342 (T) >1 (-) 13 (-) >0.05
rs113215190 chr6:32812801 PSMB9 C - 12 A vs. G 0.033 (A) - >1 (-) 31 (-) >0.05
rs9461809 chr6:32734477 HLA-DQB2 [+3166bp] C - 9 T vs. C - - <1 (-) 13 (-) >0.05
rs56145201 chr6:32805262 TAP2 C - 12 A vs. G 0.025 (G) 0.083 (G) <1 (-) 23 (-) >0.05
rs2071480 chr6:32821859 PSMB9 C - 12 A vs. C 0.35 (A) 0.325 (A) >1 (-) 6 (-) >0.05
rs1351382 chr6:32822296 PSMB9 C - 12 C vs. G 0.35 (G) 0.325 (G) <1 (-) 6 (-) >0.05
rs117627518 chr6:32770966 HLA-DOB [-9574bp] C - 9 T vs. C - 0.05 (T) <1 (-) 0 (-) >0.05
rs73738921 chr6:32793641 TAP2 C - 12 C vs. G - - <1 (-) 0 (-) >0.05
rs58415233 chr6:32791371 TAP2 C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs16870921 chr6:32792640 TAP2 C - 11 T vs. G - - <1 (-) 0 (-) >0.05
rs41270496 chr6:32810147 PSMB8 C - 12 T vs. G 0.025 (T) 0.017 (T) >1 (-) 26 (-) >0.05
rs79142022 chr6:32806673 TAP2 [+116bp] C - 12 T vs. C 0.008 (C) - <1 (-) 8 (-) >0.05
rs115075841 chr6:32736772 HLA-DQB2 [+5461bp] C - 12 T vs. C 0.083 (T) 0.108 (T) >1 (-) 0 (-) >0.05
rs72854938 chr6:32811224 PSMB8 C - 12 A vs. T 0.025 (T) - <1 (-) 26 (-) >0.05

Association studies for this region [+]