HLA-DOB, chr6:32780540-32784825 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9276627 chr6:32743835 HLA-DQB2 [+12524bp] All: C 103,235 14 C vs. T - - 1.16 (1.09-1.23) 3 (0-56) 4.81e-06
Meta_image?name=rs9276627

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs41316239 chr6:32779280 HLA-DOB [-1260bp] C - 12 A vs. G 0.067 (A) - <1 (-) 32 (-) >0.05
rs114577774 chr6:32791848 TAP2 C - 11 A vs. C 0.017 (A) - >1 (-) 0 (-) >0.05
rs1383266 chr6:32834732 PSMB9 [+7370bp] C - 12 T vs. C 0.283 (T) 0.108 (T) >1 (-) 32 (-) >0.05
rs72854939 chr6:32811366 PSMB8 C - 12 T vs. G 0.025 (T) - >1 (-) 26 (-) >0.05
rs60155930 chr6:32791663 TAP2 C - 12 A vs. C 0.017 (A) - >1 (-) 0 (-) >0.05
rs56296253 chr6:32736079 HLA-DQB2 [+4768bp] C - 12 T vs. G 0.108 (G) 0.025 (G) <1 (-) 0 (-) >0.05
rs9276625 chr6:32743744 HLA-DQB2 [+12433bp] C - 12 A vs. G - - <1 (-) 27 (-) >0.05
rs6457663 chr6:32739312 HLA-DQB2 [+8001bp] C - 11 A vs. T 0.075 (A) - <1 (-) 0 (-) >0.05
rs13215 chr6:32813852 PSMB9 C - 10 A vs. C 0.042 (A) - <1 (-) 2 (-) >0.05
rs6905503 chr6:32794119 TAP2 C - 12 T vs. G 0.017 (G) - <1 (-) 0 (-) >0.05
rs6925336 chr6:32793970 TAP2 C - 12 T vs. C 0.017 (T) - >1 (-) 0 (-) >0.05
rs1057373 chr6:32813279 PSMB9 C - 12 A vs. C 0.058 (A) 0.158 (A) >1 (-) 0 (-) >0.05
rs60045856 chr6:32799845 TAP2 C - 12 T vs. G 0.1 (G) - >1 (-) 0 (-) >0.05
rs73738914 chr6:32793423 TAP2 C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs73738916 chr6:32793456 TAP2 C - 12 A vs. C - - >1 (-) 0 (-) >0.05
rs73738923 chr6:32793706 TAP2 C - 12 T vs. G 0.017 (T) - >1 (-) 0 (-) >0.05
rs73738912 chr6:32793394 TAP2 C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs16870923 chr6:32792693 TAP2 C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs73738910 chr6:32793353 TAP2 C - 12 A vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs6925976 chr6:32755092 HLA-DQB2 [+23781bp] C - 8 T vs. G - - <1 (-) 0 (-) >0.05
rs1351383 chr6:32822269 PSMB9 C - 12 A vs. C 0.35 (C) 0.325 (C) <1 (-) 4 (-) >0.05
rs16870911 chr6:32791588 TAP2 C - 12 A vs. T 0.017 (T) - <1 (-) 0 (-) >0.05
rs241427 chr6:32804414 TAP2 C - 12 A vs. G 0.317 (A) 0.425 (A) >1 (-) 0 (-) >0.05
rs117505369 chr6:32773916 HLA-DOB [-6624bp] C - 8 A vs. C - 0.058 (A) >1 (-) 0 (-) >0.05
rs151027268 chr6:32789400 TAP2 [-210bp] C - 10 A vs. G - - >1 (-) 0 (-) >0.05
rs57470483 chr6:32791313 TAP2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs117472605 chr6:32751006 HLA-DQB2 [+19695bp] C - 5 T vs. C - 0.058 (C) <1 (-) 0 (-) >0.05
rs117821 chr6:32798711 TAP2 C - 12 T vs. C 0.417 (T) 0.35 (T) >1 (-) 0 (-) >0.05
rs56105263 chr6:32791291 TAP2 C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs56318279 chr6:32817008 PSMB9 C - 11 T vs. C - - >1 (-) 11 (-) >0.05
rs13217824 chr6:32756953 HLA-DOB [-23587bp] C - 12 T vs. G - - <1 (-) 0 (-) >0.05
rs4711312 chr6:32814659 PSMB9 C - 12 A vs. G 0.1 (G) 0.175 (G) <1 (-) 0 (-) >0.05
rs13201932 chr6:32756950 HLA-DOB [-23590bp] C - 12 C vs. G - - >1 (-) 0 (-) >0.05
rs114254641 chr6:32744301 HLA-DQB2 [+12990bp] C - 9 A vs. C - - <1 (-) 0 (-) >0.05
rs56033885 chr6:32807077 TAP2 [+520bp] C - 12 T vs. C - - >1 (-) 39 (-) >0.05
chr6:32731730 chr6:32731730 HLA-DQB2 [+419bp] C - 9 A vs. G - - <1 (-) 13 (-) >0.05
rs28893553 chr6:32750421 HLA-DQB2 [+19110bp] C - 11 T vs. C 0.092 (C) - >1 (-) 0 (-) >0.05
chr6:32744307 chr6:32744307 HLA-DQB2 [+12996bp] C - 9 A vs. G - - <1 (-) 0 (-) >0.05
rs41316548 chr6:32797167 TAP2 C - 12 T vs. C 0.042 (T) 0.017 (T) <1 (-) 15 (-) >0.05
rs28987082 chr6:32750424 HLA-DQB2 [+19113bp] C - 11 A vs. C - - >1 (-) 0 (-) >0.05
rs3819716 chr6:32804284 TAP2 C - 12 A vs. G 0.417 (G) 0.458 (A) <1 (-) 0 (-) >0.05
rs116125777 chr6:32744136 HLA-DQB2 [+12825bp] C - 12 T vs. G 0.033 (G) 0.033 (G) >1 (-) 0 (-) >0.05
rs241430 chr6:32802820 TAP2 C - 12 T vs. C 0.408 (T) 0.333 (T) >1 (-) 0 (-) >0.05
rs16870917 chr6:32792092 TAP2 C - 12 T vs. C 0.017 (C) - <1 (-) 0 (-) >0.05
rs114267026 chr6:32731756 HLA-DQB2 [+445bp] C - 6 A vs. G - - <1 (-) 2 (-) >0.05
rs2071535 chr6:32824187 PSMB9 C - 9 A vs. G - 0.117 (A) <1 (-) 0 (-) >0.05
rs58075577 chr6:32791929 TAP2 C - 12 C vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2621378 chr6:32763040 HLA-DOB [-17500bp] C - 11 A vs. G 0.408 (G) 0.25 (G) >1 (-) 15 (-) >0.05
rs78042421 chr6:32786516 HLA-DOB [+1691bp] C - 12 T vs. C 0.033 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs28986375 chr6:32752206 HLA-DQB2 [+20895bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]