HLA-DQA2, chr6:32709119-32714992 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs5002702 chr6:32659158 HLA-DQB1 [+22998bp] C - 11 A vs. G 0.5 (G) 0.45 (G) <1 (-) 29 (-) >0.05
rs72847158 chr6:32664708 HLA-DQB1 [+28548bp] C - 11 T vs. C 0.133 (C) 0.05 (C) <1 (-) 75 (-) >0.05
rs199895302 chr6:32728965 HLA-DQB2 C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs9276699 chr6:32756567 HLA-DOB [-23973bp] C - 12 A vs. T 0.308 (T) 0.267 (T) >1 (-) 0 (-) >0.05
rs9275425 chr6:32670874 HLA-DQB1 [+34714bp] C - 12 A vs. C 0.317 (A) 0.292 (A) <1 (-) 60 (-) >0.05
rs17212546 chr6:32665615 HLA-DQB1 [+29455bp] C - 11 T vs. C 0.133 (T) - >1 (-) 74 (-) >0.05
rs114361720 chr6:32664635 HLA-DQB1 [+28475bp] C - 11 C vs. G 0.133 (C) 0.033 (C) >1 (-) 75 (-) >0.05
rs115255544 chr6:32664628 HLA-DQB1 [+28468bp] C - 11 A vs. G 0.133 (G) 0.033 (G) <1 (-) 75 (-) >0.05
rs6923022 chr6:32664289 HLA-DQB1 [+28129bp] C - 11 T vs. G 0.133 (T) 0.033 (T) >1 (-) 76 (-) >0.05
rs17212937 chr6:32681339 HLA-DQA2 [-27780bp] C - 11 T vs. C 0.1 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs67887332 chr6:32664399 HLA-DQB1 [+28239bp] C - 11 A vs. G 0.133 (A) 0.05 (A) >1 (-) 75 (-) >0.05
rs4711304 chr6:32660170 HLA-DQB1 [+24010bp] C - 11 T vs. C 0.492 (T) 0.458 (T) >1 (-) 27 (-) >0.05
rs4713583 chr6:32660153 HLA-DQB1 [+23993bp] C - 11 T vs. G 0.492 (T) 0.417 (T) >1 (-) 27 (-) >0.05
rs9275427 chr6:32670915 HLA-DQB1 [+34755bp] C - 12 T vs. C 0.317 (T) 0.292 (T) <1 (-) 60 (-) >0.05
rs9275225 chr6:32660262 HLA-DQB1 [+24102bp] C - 11 A vs. G 0.475 (A) 0.45 (G) <1 (-) 28 (-) >0.05
rs719654 chr6:32752139 HLA-DQB2 [+20828bp] C - 12 A vs. G 0.225 (A) 0.3 (A) >1 (-) 1 (-) >0.05
rs114744294 chr6:32660866 HLA-DQB1 [+24706bp] C - 8 A vs. G - 0.083 (G) <1 (-) 0 (-) >0.05
rs112357706 chr6:32685344 HLA-DQA2 [-23775bp] C - 7 T vs. C 0.008 (C) - >1 (-) 26 (-) >0.05
rs1794278 chr6:32667628 HLA-DQB1 [+31468bp] C - 8 T vs. C - - >1 (-) 0 (-) >0.05
rs5002704 chr6:32659279 HLA-DQB1 [+23119bp] C - 11 T vs. C - - >1 (-) 37 (-) >0.05
rs146335245 chr6:32662357 HLA-DQB1 [+26197bp] C - 6 T vs. C - - <1 (-) 0 (-) >0.05
rs34918548 chr6:32666142 HLA-DQB1 [+29982bp] C - 11 A vs. G 0.125 (G) - <1 (-) 75 (-) >0.05
rs1794281 chr6:32666817 HLA-DQB1 [+30657bp] C - 8 A vs. G 0.033 (G) 0.058 (G) <1 (-) 0 (-) >0.05
rs4713587 chr6:32659535 HLA-DQB1 [+23375bp] C - 11 T vs. G 0.492 (G) - <1 (-) 28 (-) >0.05
rs57007283 chr6:32708560 HLA-DQA2 [-559bp] C - 4 T vs. C 0.008 (T) - <1 (-) 44 (-) >0.05
rs59593022 chr6:32708747 HLA-DQA2 [-372bp] C - 4 A vs. C - 0.033 (A) <1 (-) 44 (-) >0.05
rs28666756 chr6:32707665 HLA-DQA2 [-1454bp] C - 4 A vs. G - 0.025 (A) <1 (-) 44 (-) >0.05
rs28421301 chr6:32707387 HLA-DQA2 [-1732bp] C - 4 T vs. C - 0.033 (C) >1 (-) 44 (-) >0.05
rs113734161 chr6:32703277 HLA-DQA2 [-5842bp] C - 6 T vs. C 0.008 (T) - <1 (-) 34 (-) >0.05
rs6925725 chr6:32703942 HLA-DQA2 [-5177bp] C - 6 A vs. C - - >1 (-) 34 (-) >0.05
rs73398730 chr6:32703744 HLA-DQA2 [-5375bp] C - 6 T vs. C 0.008 (C) 0.033 (C) >1 (-) 34 (-) >0.05
rs113936637 chr6:32750260 HLA-DQB2 [+18949bp] C - 12 A vs. T 0.083 (A) - >1 (-) 0 (-) >0.05
rs3892710 chr6:32682862 HLA-DQA2 [-26257bp] C - 11 T vs. C 0.167 (T) 0.067 (T) <1 (-) 0 (-) >0.05
rs73402884 chr6:32728393 HLA-DQB2 C - 4 A vs. T - - <1 (-) 17 (-) >0.05
rs113721192 chr6:32682590 HLA-DQA2 [-26529bp] C - 4 A vs. G 0.008 (A) 0.042 (A) <1 (-) 0 (-) >0.05
rs34605008 chr6:32666135 HLA-DQB1 [+29975bp] C - 11 T vs. C - - <1 (-) 75 (-) >0.05
rs6920126 chr6:32763160 HLA-DOB [-17380bp] C - 6 T vs. G - - >1 (-) 50 (-) >0.05
rs17206175 chr6:32665495 HLA-DQB1 [+29335bp] C - 11 A vs. C 0.117 (A) - >1 (-) 74 (-) >0.05
rs35740559 chr6:32666132 HLA-DQB1 [+29972bp] C - 11 T vs. C - - >1 (-) 75 (-) >0.05
rs9275375 chr6:32668632 HLA-DQB1 [+32472bp] C - 12 A vs. G 0.325 (A) 0.292 (A) <1 (-) 66 (-) >0.05
rs34214702 chr6:32666081 HLA-DQB1 [+29921bp] C - 11 A vs. C - - >1 (-) 73 (-) >0.05
rs9275376 chr6:32668633 HLA-DQB1 [+32473bp] C - 12 T vs. G 0.325 (T) 0.25 (T) <1 (-) 66 (-) >0.05
rs1794529 chr6:32672383 HLA-DQB1 [+36223bp] C - 8 C vs. G 0.033 (C) 0.075 (C) >1 (-) 0 (-) >0.05
rs114948848 chr6:32664797 HLA-DQB1 [+28637bp] C - 11 A vs. G 0.133 (G) 0.017 (G) <1 (-) 75 (-) >0.05
rs115074443 chr6:32664795 HLA-DQB1 [+28635bp] C - 11 T vs. C 0.133 (T) 0.042 (T) >1 (-) 75 (-) >0.05
rs115785636 chr6:32664775 HLA-DQB1 [+28615bp] C - 11 C vs. G 0.133 (C) - >1 (-) 75 (-) >0.05
rs5002708 chr6:32659357 HLA-DQB1 [+23197bp] C - 11 T vs. C - - >1 (-) 37 (-) >0.05
rs115594945 chr6:32664771 HLA-DQB1 [+28611bp] C - 11 A vs. G 0.133 (A) - >1 (-) 75 (-) >0.05
rs17427445 chr6:32663764 HLA-DQB1 [+27604bp] C - 11 A vs. G 0.133 (A) 0.025 (A) >1 (-) 76 (-) >0.05
rs35473146 chr6:32663713 HLA-DQB1 [+27553bp] C - 11 A vs. G 0.133 (G) 0.033 (G) <1 (-) 76 (-) >0.05

Association studies for this region [+]