HLA-DQA2, chr6:32709119-32714992 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs5021449 chr6:32707806 HLA-DQA2 [-1313bp] C - 11 T vs. C 0.35 (C) 0.192 (T) <1 (-) 11 (-) >0.05
rs2051599 chr6:32709346 HLA-DQA2 C - 11 T vs. C 0.35 (C) 0.292 (T) <1 (-) 7 (-) >0.05
rs2858312 chr6:32667230 HLA-DQB1 [+31070bp] C - 12 C vs. G 0.233 (C) 0.475 (C) <1 (-) 34 (-) >0.05
rs9276458 chr6:32716000 HLA-DQA2 [+1008bp] C - 11 A vs. T 0.083 (A) - <1 (-) 17 (-) >0.05
rs3129741 chr6:32687102 HLA-DQA2 [-22017bp] C - 12 A vs. G 0.308 (G) 0.125 (G) >1 (-) 0 (-) >0.05
rs9276457 chr6:32715993 HLA-DQA2 [+1001bp] C - 11 T vs. C 0.083 (T) - <1 (-) 17 (-) >0.05
rs114267026 chr6:32731756 HLA-DQB2 [+445bp] C - 6 A vs. G - - <1 (-) 2 (-) >0.05
rs3129740 chr6:32686921 HLA-DQA2 [-22198bp] C - 12 A vs. G 0.3 (G) 0.183 (G) >1 (-) 1 (-) >0.05
rs5014415 chr6:32719439 MIR3135B [+1683bp] C - 11 T vs. C 0.083 (T) - <1 (-) 17 (-) >0.05
rs5014414 chr6:32719440 MIR3135B [+1684bp] C - 11 A vs. G 0.083 (G) - >1 (-) 17 (-) >0.05
rs9276464 chr6:32716294 HLA-DQA2 [+1302bp] C - 11 T vs. C 0.083 (T) - <1 (-) 17 (-) >0.05
rs2395254 chr6:32716837 MIR3135B [-852bp] C - 11 T vs. C 0.083 (C) - >1 (-) 16 (-) >0.05
rs5014418 chr6:32719381 MIR3135B [+1625bp] C - 11 A vs. C 0.083 (C) - >1 (-) 17 (-) >0.05
rs2894291 chr6:32716827 MIR3135B [-862bp] C - 11 T vs. C 0.083 (C) - >1 (-) 14 (-) >0.05
rs2621378 chr6:32763040 HLA-DOB [-17500bp] C - 11 A vs. G 0.408 (G) 0.25 (G) >1 (-) 15 (-) >0.05
rs4415152 chr6:32717024 MIR3135B [-665bp] C - 11 T vs. C 0.083 (C) - >1 (-) 16 (-) >0.05
rs9276439 chr6:32714603 HLA-DQA2 C - 11 T vs. C 0.083 (T) - <1 (-) 16 (-) >0.05
rs9275766 chr6:32689362 HLA-DQA2 [-19757bp] C - 10 A vs. G 0.075 (G) - >1 (-) 0 (-) >0.05
rs28986375 chr6:32752206 HLA-DQB2 [+20895bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05
rs28986376 chr6:32752209 HLA-DQB2 [+20898bp] C - 12 A vs. T 0.092 (A) - >1 (-) 0 (-) >0.05
rs9276449 chr6:32715653 HLA-DQA2 [+661bp] C - 11 T vs. C 0.083 (T) - <1 (-) 16 (-) >0.05
rs9276465 chr6:32716409 MIR3135B [-1280bp] C - 11 A vs. G 0.083 (G) - >1 (-) 17 (-) >0.05
rs3129744 chr6:32687294 HLA-DQA2 [-21825bp] C - 12 T vs. G 0.3 (G) 0.158 (G) >1 (-) 2 (-) >0.05
rs74756176 chr6:32664373 HLA-DQB1 [+28213bp] C - 11 T vs. G - 0.133 (T) >1 (-) 0 (-) >0.05
rs9275668 chr6:32686661 HLA-DQA2 [-22458bp] C - 12 A vs. T 0.3 (A) 0.167 (A) <1 (-) 0 (-) >0.05
rs9276453 chr6:32715775 HLA-DQA2 [+783bp] C - 11 C vs. G 0.083 (C) - <1 (-) 17 (-) >0.05
rs4585553 chr6:32716736 MIR3135B [-953bp] C - 11 A vs. G 0.083 (G) - >1 (-) 17 (-) >0.05
rs2858323 chr6:32660707 HLA-DQB1 [+24547bp] C - 11 T vs. C 0.075 (T) 0.192 (T) <1 (-) 0 (-) >0.05
rs2894287 chr6:32707282 HLA-DQA2 [-1837bp] C - 11 A vs. G 0.308 (G) 0.192 (A) <1 (-) 11 (-) >0.05
rs77537414 chr6:32664356 HLA-DQB1 [+28196bp] C - 11 C vs. G - 0.133 (C) >1 (-) 0 (-) >0.05
rs9276520 chr6:32720415 MIR3135B [+2659bp] C - 11 T vs. C 0.075 (T) - <1 (-) 0 (-) >0.05
rs9276484 chr6:32718452 MIR3135B [+696bp] C - 11 A vs. G 0.083 (G) - >1 (-) 17 (-) >0.05
rs4351242 chr6:32717722 MIR3135B C - 11 T vs. C 0.083 (T) - <1 (-) 17 (-) >0.05
rs4370403 chr6:32717515 MIR3135B [-174bp] C - 11 A vs. G 0.083 (A) - <1 (-) 17 (-) >0.05
rs4548006 chr6:32717604 MIR3135B [-85bp] C - 11 A vs. G 0.083 (A) - <1 (-) 17 (-) >0.05
rs9276472 chr6:32717224 MIR3135B [-465bp] C - 11 A vs. G 0.083 (G) - >1 (-) 17 (-) >0.05
rs2621396 chr6:32752913 HLA-DQB2 [+21602bp] C - 12 A vs. T 0.283 (T) 0.383 (T) <1 (-) 1 (-) >0.05
rs77005221 chr6:32733134 HLA-DQB2 [+1823bp] C - 5 A vs. G - - >1 (-) 0 (-) >0.05
rs9276488 chr6:32718602 MIR3135B [+846bp] C - 11 T vs. G 0.083 (G) - >1 (-) 17 (-) >0.05
rs9276489 chr6:32718620 MIR3135B [+864bp] C - 11 T vs. C 0.075 (T) - <1 (-) 17 (-) >0.05
rs7752257 chr6:32698976 HLA-DQA2 [-10143bp] C - 11 T vs. G 0.3 (T) 0.192 (T) <1 (-) 5 (-) >0.05
rs9276487 chr6:32718594 MIR3135B [+838bp] C - 10 A vs. T 0.083 (A) - <1 (-) 26 (-) >0.05
rs9275708 chr6:32688175 HLA-DQA2 [-20944bp] C - 12 A vs. G 0.325 (G) 0.175 (G) >1 (-) 3 (-) >0.05
rs2646994 chr6:32665813 HLA-DQB1 [+29653bp] C - 12 T vs. C 0.075 (T) 0.167 (T) <1 (-) 0 (-) >0.05
rs9276516 chr6:32720302 MIR3135B [+2546bp] C - 11 T vs. C 0.083 (C) - >1 (-) 14 (-) >0.05
rs60561792 chr6:32708075 HLA-DQA2 [-1044bp] C - 6 A vs. G - - >1 (-) 0 (-) >0.05
rs10456068 chr6:32659419 HLA-DQB1 [+23259bp] C - 11 T vs. C - - >1 (-) 0 (-) >0.05
rs28986407 chr6:32755034 HLA-DQB2 [+23723bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs28986408 chr6:32755043 HLA-DQB2 [+23732bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs28986330 chr6:32743642 HLA-DQB2 [+12331bp] C - 12 T vs. C 0.092 (T) - >1 (-) 0 (-) >0.05

Association studies for this region [+]