HLA-DQA2, chr6:32709119-32714992 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs115454812 chr6:32739931 HLA-DQB2 [+8620bp] C - 10 A vs. G 0.008 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs1794272 chr6:32672216 HLA-DQB1 [+36056bp] C - 8 A vs. T 0.1 (T) 0.042 (T) <1 (-) 0 (-) >0.05
rs2621394 chr6:32754409 HLA-DQB2 [+23098bp] C - 12 A vs. G 0.442 (A) - >1 (-) 11 (-) >0.05
rs9275758 chr6:32689191 HLA-DQA2 [-19928bp] C - 12 A vs. G 0.475 (A) 0.225 (G) <1 (-) 13 (-) >0.05
rs9276433 chr6:32712411 HLA-DQA2 C - 11 A vs. C 0.492 (A) 0.233 (A) <1 (-) 31 (-) >0.05
rs6457658 chr6:32737149 HLA-DQB2 [+5838bp] C - 12 A vs. G 0.342 (A) 0.242 (G) >1 (-) 23 (-) >0.05
rs2857182 chr6:32751179 HLA-DQB2 [+19868bp] C - 12 A vs. G 0.433 (A) 0.233 (A) >1 (-) 5 (-) >0.05
rs150953172 chr6:32744988 HLA-DQB2 [+13677bp] C - 6 T vs. C - - >1 (-) 20 (-) >0.05
rs6457659 chr6:32737183 HLA-DQB2 [+5872bp] C - 12 A vs. C 0.35 (C) 0.242 (A) >1 (-) 24 (-) >0.05
rs2857175 chr6:32754398 HLA-DQB2 [+23087bp] C - 12 A vs. G - - <1 (-) 8 (-) >0.05
rs9276412 chr6:32710552 HLA-DQA2 C - 11 A vs. G 0.483 (A) 0.167 (G) >1 (-) 23 (-) >0.05
rs6457655 chr6:32735506 HLA-DQB2 [+4195bp] C - 12 T vs. G 0.35 (G) 0.242 (T) >1 (-) 23 (-) >0.05
rs1794511 chr6:32671207 HLA-DQB1 [+35047bp] C - 8 T vs. G 0.092 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs2621420 chr6:32740761 HLA-DQB2 [+9450bp] C - 12 T vs. C 0.408 (T) 0.225 (T) <1 (-) 19 (-) >0.05
rs9296043 chr6:32736103 HLA-DQB2 [+4792bp] C - 12 T vs. C 0.35 (C) 0.233 (T) >1 (-) 24 (-) >0.05
rs9296044 chr6:32736144 HLA-DQB2 [+4833bp] C - 12 A vs. T 0.35 (A) 0.242 (T) <1 (-) 24 (-) >0.05
rs1585891 chr6:32736722 HLA-DQB2 [+5411bp] C - 12 T vs. C 0.35 (T) 0.242 (C) <1 (-) 24 (-) >0.05
rs9296041 chr6:32735861 HLA-DQB2 [+4550bp] C - 12 A vs. C 0.358 (C) 0.242 (A) >1 (-) 22 (-) >0.05
rs9296040 chr6:32735855 HLA-DQB2 [+4544bp] C - 12 A vs. G 0.35 (A) 0.242 (G) <1 (-) 22 (-) >0.05
rs9276584 chr6:32730835 HLA-DQB2 C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) >0.05
rs6457660 chr6:32737394 HLA-DQB2 [+6083bp] C - 12 T vs. G 0.35 (G) 0.242 (T) >1 (-) 23 (-) >0.05
rs9275576 chr6:32679326 HLA-DQA2 [-29793bp] C - 9 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs2213568 chr6:32711576 HLA-DQA2 C - 11 A vs. C 0.492 (A) 0.308 (A) <1 (-) 30 (-) >0.05
rs7760779 chr6:32746464 HLA-DQB2 [+15153bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9276613 chr6:32743192 HLA-DQB2 [+11881bp] C - 12 C vs. G 0.35 (C) 0.242 (C) <1 (-) 10 (-) >0.05
rs9276614 chr6:32743193 HLA-DQB2 [+11882bp] C - 12 A vs. G 0.367 (A) 0.242 (A) <1 (-) 10 (-) >0.05
rs13203578 chr6:32752540 HLA-DQB2 [+21229bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs1585892 chr6:32736624 HLA-DQB2 [+5313bp] C - 12 A vs. G 0.35 (G) 0.242 (A) >1 (-) 24 (-) >0.05
rs13219960 chr6:32752641 HLA-DQB2 [+21330bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs1794514 chr6:32667473 HLA-DQB1 [+31313bp] C - 7 C vs. G - - >1 (-) 0 (-) >0.05
rs2859056 chr6:32694420 HLA-DQA2 [-14699bp] C - 10 A vs. T 0.5 (T) 0.3 (A) 1 (-) 15 (-) >0.05
rs9275710 chr6:32688220 HLA-DQA2 [-20899bp] C - 12 T vs. G 0.492 (G) 0.242 (T) 1 (-) 6 (-) >0.05
rs6933763 chr6:32722852 HLA-DQB2 [-1023bp] C - 4 A vs. G - 0.033 (G) 1 (-) 0 (-) >0.05

Association studies for this region [+]