HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275424 chr6:32670576 HLA-DQB1 [+34416bp] C - 12 A vs. G 0.325 (G) 0.292 (G) >1 (-) 62 (-) >0.05
rs28383311 chr6:32587011 HLA-DQA1 [-8945bp] C - 3 A vs. T 0.258 (T) 0.042 (T) >1 (-) 16 (-) >0.05
rs17843605 chr6:32620391 HLA-DQA1 [+5552bp] C - 3 T vs. G 0.492 (G) 0.417 (G) <1 (-) 0 (-) >0.05
rs9272208 chr6:32601967 HLA-DQA1 C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs17843606 chr6:32620399 HLA-DQA1 [+5560bp] C - 3 T vs. G 0.483 (T) 0.417 (G) <1 (-) 0 (-) >0.05
rs9275408 chr6:32670110 HLA-DQB1 [+33950bp] C - 12 T vs. C 0.325 (C) 0.292 (C) >1 (-) 62 (-) >0.05
rs9274687 chr6:32636882 HLA-DQB1 [+722bp] C - 4 T vs. C 0.442 (T) 0.325 (C) <1 (-) 52 (-) >0.05
rs9275235 chr6:32660587 HLA-DQB1 [+24427bp] C - 11 A vs. G - - >1 (-) 18 (-) >0.05
rs17843615 chr6:32620663 HLA-DQA1 [+5824bp] C - 3 T vs. C 0.483 (C) - >1 (-) 0 (-) >0.05
rs115911154 chr6:32674194 HLA-DQA2 [-34925bp] C - 10 A vs. G - 0.067 (G) <1 (-) 0 (-) >0.05
rs9275248 chr6:32661135 HLA-DQB1 [+24975bp] C - 12 A vs. G - - >1 (-) 26 (-) >0.05
rs9275386 chr6:32668960 HLA-DQB1 [+32800bp] C - 12 A vs. T 0.325 (T) 0.292 (T) >1 (-) 62 (-) >0.05
rs117296796 chr6:32674192 HLA-DQA2 [-34927bp] C - 10 A vs. G - 0.075 (G) <1 (-) 0 (-) >0.05
rs674313 chr6:32578082 HLA-DQA1 [-17874bp] C - 4 T vs. C 0.117 (T) 0.275 (T) >1 (-) 0 (-) >0.05
rs17427564 chr6:32667067 HLA-DQB1 [+30907bp] C - 11 T vs. C 0.133 (C) 0.017 (C) <1 (-) 74 (-) >0.05
rs73728240 chr6:32582320 HLA-DQA1 [-13636bp] C - 3 A vs. T 0.017 (T) 0.117 (T) >1 (-) 0 (-) >0.05
rs9275388 chr6:32669084 HLA-DQB1 [+32924bp] C - 12 T vs. C 0.325 (C) 0.292 (C) >1 (-) 62 (-) >0.05
rs112574398 chr6:32658610 HLA-DQB1 [+22450bp] C - 10 T vs. G - 0.108 (T) >1 (-) 0 (-) >0.05
rs9272271 chr6:32603526 HLA-DQA1 C - 3 A vs. T 0.133 (T) 0.167 (T) <1 (-) 28 (-) >0.05
rs9275250 chr6:32661141 HLA-DQB1 [+24981bp] C - 12 T vs. C - - <1 (-) 25 (-) >0.05
rs116147199 chr6:32658355 HLA-DQB1 [+22195bp] C - 10 A vs. G - 0.092 (G) <1 (-) 0 (-) >0.05
rs114996593 chr6:32658360 HLA-DQB1 [+22200bp] C - 10 T vs. C 0.008 (C) 0.083 (C) <1 (-) 0 (-) >0.05
rs9275374 chr6:32668526 HLA-DQB1 [+32366bp] C - 12 T vs. C 0.325 (T) 0.292 (T) <1 (-) 62 (-) >0.05
rs9275379 chr6:32668804 HLA-DQB1 [+32644bp] C - 12 T vs. C 0.325 (T) 0.25 (T) <1 (-) 61 (-) >0.05
rs9275231 chr6:32660505 HLA-DQB1 [+24345bp] C - 12 T vs. C 0.5 (T) 0.458 (T) >1 (-) 23 (-) >0.05
rs9271712 chr6:32593432 HLA-DQA1 [-2524bp] C - 3 A vs. G - 0.35 (A) >1 (-) 0 (-) >0.05
rs17843603 chr6:32620241 HLA-DQA1 [+5402bp] C - 3 A vs. G 0.5 (G) 0.45 (G) <1 (-) 0 (-) >0.05
rs34704034 chr6:32581929 HLA-DQA1 [-14027bp] C - 3 A vs. G 0.017 (G) 0.117 (G) >1 (-) 0 (-) >0.05
rs9275428 chr6:32670978 HLA-DQB1 [+34818bp] C - 12 A vs. G 0.325 (G) 0.3 (G) >1 (-) 61 (-) >0.05
rs56361357 chr6:32581996 HLA-DQA1 [-13960bp] C - 3 A vs. C 0.008 (A) 0.058 (A) <1 (-) 0 (-) >0.05
rs9275384 chr6:32668898 HLA-DQB1 [+32738bp] C - 12 T vs. C 0.325 (C) 0.292 (C) >1 (-) 61 (-) >0.05
rs9275385 chr6:32668917 HLA-DQB1 [+32757bp] C - 12 T vs. C 0.325 (T) 0.292 (T) <1 (-) 61 (-) >0.05
rs34389498 chr6:32666348 HLA-DQB1 [+30188bp] C - 11 T vs. C - - <1 (-) 74 (-) >0.05
rs7754496 chr6:32657893 HLA-DQB1 [+21733bp] C - 10 A vs. T - 0.133 (T) <1 (-) 0 (-) >0.05
rs35678932 chr6:32666863 HLA-DQB1 [+30703bp] C - 11 T vs. G 0.133 (T) - >1 (-) 74 (-) >0.05
rs9274702 chr6:32637184 HLA-DQB1 [+1024bp] C - 4 A vs. C - - <1 (-) 54 (-) >0.05
rs7775055 chr6:32657916 HLA-DQB1 [+21756bp] C - 10 T vs. C - 0.133 (C) <1 (-) 0 (-) >0.05
rs111848638 chr6:32666630 HLA-DQB1 [+30470bp] C - 11 A vs. T 0.108 (T) 0.033 (T) <1 (-) 74 (-) >0.05
rs113984677 chr6:32666636 HLA-DQB1 [+30476bp] C - 11 A vs. G 0.117 (A) 0.05 (A) >1 (-) 74 (-) >0.05
rs9272273 chr6:32603583 HLA-DQA1 C - 3 A vs. G 0.133 (G) 0.183 (G) <1 (-) 30 (-) >0.05
rs28595756 chr6:32589772 HLA-DQA1 [-6184bp] C - 8 T vs. C 0.192 (C) 0.133 (C) <1 (-) 56 (-) >0.05
rs35759989 chr6:32581096 HLA-DQA1 [-14860bp] C - 3 T vs. C - 0.117 (C) >1 (-) 1 (-) >0.05
rs36062941 chr6:32666051 HLA-DQB1 [+29891bp] C - 11 T vs. C 0.133 (T) 0.033 (T) >1 (-) 74 (-) >0.05
rs6907732 chr6:32671972 HLA-DQB1 [+35812bp] C - 12 T vs. G - - >1 (-) 0 (-) >0.05
rs9275251 chr6:32661146 HLA-DQB1 [+24986bp] C - 11 A vs. C - - >1 (-) 31 (-) >0.05
rs17612781 chr6:32620311 HLA-DQA1 [+5472bp] C - 3 T vs. C 0.483 (T) 0.425 (T) >1 (-) 0 (-) >0.05
rs17212581 chr6:32665819 HLA-DQB1 [+29659bp] C - 11 T vs. C 0.117 (C) 0.05 (C) <1 (-) 73 (-) >0.05
rs17612858 chr6:32620622 HLA-DQA1 [+5783bp] C - 3 A vs. T 0.442 (A) 0.433 (A) >1 (-) 0 (-) >0.05
rs17212588 chr6:32665820 HLA-DQB1 [+29660bp] C - 11 A vs. G 0.108 (A) 0.033 (A) >1 (-) 73 (-) >0.05
rs9272251 chr6:32602966 HLA-DQA1 C - 3 A vs. G 0.125 (G) 0.167 (G) <1 (-) 10 (-) >0.05

Association studies for this region [+]