HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9274739 chr6:32637940 HLA-DQB1 [+1780bp] C - 4 A vs. T 0.317 (T) 0.433 (T) >1 (-) 42 (-) >0.05
rs9275436 chr6:32671399 HLA-DQB1 [+35239bp] C - 12 C vs. G 0.325 (G) 0.283 (G) >1 (-) 61 (-) >0.05
rs3129783 chr6:32655730 HLA-DQB1 [+19570bp] C - 8 A vs. G 0.433 (A) 0.35 (A) >1 (-) 35 (-) >0.05
rs17499411 chr6:32665002 HLA-DQB1 [+28842bp] C - 11 C vs. G 0.133 (G) 0.033 (G) <1 (-) 74 (-) >0.05
rs17612795 chr6:32620348 HLA-DQA1 [+5509bp] C - 3 A vs. T 0.392 (T) 0.183 (T) >1 (-) 0 (-) >0.05
rs34593937 chr6:32666271 HLA-DQB1 [+30111bp] C - 11 T vs. C 0.133 (C) 0.042 (C) <1 (-) 74 (-) >0.05
rs35836258 chr6:32666296 HLA-DQB1 [+30136bp] C - 11 A vs. G 0.133 (A) 0.058 (A) >1 (-) 74 (-) >0.05
rs4713580 chr6:32659994 HLA-DQB1 [+23834bp] C - 12 T vs. C 0.492 (C) 0.408 (C) <1 (-) 20 (-) >0.05
rs138256019 chr6:32673055 HLA-DQA2 [-36064bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs78825896 chr6:32667181 HLA-DQB1 [+31021bp] C - 11 T vs. G 0.108 (G) 0.033 (G) <1 (-) 74 (-) >0.05
rs9272274 chr6:32603599 HLA-DQA1 C - 3 T vs. C 0.117 (T) 0.183 (T) >1 (-) 31 (-) >0.05
rs9275464 chr6:32672082 HLA-DQB1 [+35922bp] C - 12 A vs. G - 0.225 (G) >1 (-) 63 (-) >0.05
rs17212553 chr6:32665687 HLA-DQB1 [+29527bp] C - 11 T vs. G 0.133 (T) 0.033 (T) >1 (-) 74 (-) >0.05
rs9275469 chr6:32672430 HLA-DQB1 [+36270bp] C - 12 A vs. G 0.325 (G) 0.242 (G) >1 (-) 63 (-) >0.05
rs9274695 chr6:32636997 HLA-DQB1 [+837bp] C - 4 T vs. C - - <1 (-) 54 (-) >0.05
rs9275468 chr6:32672412 HLA-DQB1 [+36252bp] C - 12 A vs. G 0.325 (A) 0.242 (A) <1 (-) 63 (-) >0.05
rs5002707 chr6:32659337 HLA-DQB1 [+23177bp] C - 11 T vs. C - - >1 (-) 30 (-) >0.05
rs113666293 chr6:32656477 HLA-DQB1 [+20317bp] C - 9 C vs. G - 0.125 (C) >1 (-) 0 (-) >0.05
rs145281025 chr6:32674252 HLA-DQA2 [-34867bp] C - 11 A vs. G - - >1 (-) 72 (-) >0.05
rs71202902 chr6:32667175 HLA-DQB1 [+31015bp] C - 11 T vs. C 0.108 (T) 0.033 (T) >1 (-) 73 (-) >0.05
rs75778474 chr6:32667173 HLA-DQB1 [+31013bp] C - 11 T vs. C 0.092 (T) 0.033 (T) >1 (-) 73 (-) >0.05
rs78043146 chr6:32665826 HLA-DQB1 [+29666bp] C - 11 T vs. G 0.125 (G) - <1 (-) 74 (-) >0.05
rs7764819 chr6:32680576 HLA-DQA2 [-28543bp] C - 11 T vs. G 0.1 (G) 0.158 (G) >1 (-) 0 (-) >0.05
rs141890570 chr6:32667412 HLA-DQB1 [+31252bp] C - 11 A vs. G - - >1 (-) 74 (-) >0.05
rs4713581 chr6:32660023 HLA-DQB1 [+23863bp] C - 12 T vs. C 0.492 (T) 0.433 (T) >1 (-) 19 (-) >0.05
rs66795753 chr6:32667381 HLA-DQB1 [+31221bp] C - 11 C vs. G 0.117 (C) 0.033 (C) >1 (-) 74 (-) >0.05
rs34475663 chr6:32666563 HLA-DQB1 [+30403bp] C - 11 A vs. T 0.133 (A) 0.067 (A) >1 (-) 74 (-) >0.05
rs9275494 chr6:32673479 HLA-DQA2 [-35640bp] C - 12 C vs. G 0.325 (C) 0.208 (C) <1 (-) 64 (-) >0.05
rs9275431 chr6:32671140 HLA-DQB1 [+34980bp] C - 12 A vs. G 0.317 (A) 0.292 (A) <1 (-) 62 (-) >0.05
rs7765379 chr6:32680928 HLA-DQA2 [-28191bp] C - 11 T vs. G 0.1 (G) 0.142 (G) >1 (-) 0 (-) >0.05
rs4713582 chr6:32660051 HLA-DQB1 [+23891bp] C - 12 T vs. C 0.492 (T) 0.45 (T) >1 (-) 19 (-) >0.05
rs17206182 chr6:32665504 HLA-DQB1 [+29344bp] C - 11 T vs. C 0.117 (T) - >1 (-) 74 (-) >0.05
rs9274705 chr6:32637245 HLA-DQB1 [+1085bp] C - 4 A vs. G - - <1 (-) 57 (-) >0.05
rs3129758 chr6:32584625 HLA-DQA1 [-11331bp] C - 4 A vs. G 0.442 (A) 0.317 (A) >1 (-) 56 (-) >0.05
rs1794510 chr6:32652171 HLA-DQB1 [+16011bp] C - 3 A vs. C - 0.142 (A) >1 (-) 0 (-) >0.05
rs36231348 chr6:32592083 HLA-DQA1 [-3873bp] C - 8 A vs. G 0.208 (A) 0.133 (A) >1 (-) 54 (-) >0.05
rs9271648 chr6:32592358 HLA-DQA1 [-3598bp] C - 8 T vs. C 0.375 (T) 0.175 (T) >1 (-) 58 (-) >0.05
rs17206119 chr6:32665104 HLA-DQB1 [+28944bp] C - 11 A vs. T 0.133 (A) - >1 (-) 75 (-) >0.05
rs17212518 chr6:32665475 HLA-DQB1 [+29315bp] C - 11 A vs. C 0.133 (C) - <1 (-) 74 (-) >0.05
rs4248168 chr6:32659743 HLA-DQB1 [+23583bp] C - 12 C vs. G 0.492 (G) 0.392 (G) <1 (-) 17 (-) >0.05
rs17212462 chr6:32665125 HLA-DQB1 [+28965bp] C - 11 T vs. C 0.133 (T) - >1 (-) 75 (-) >0.05
rs9275492 chr6:32673446 HLA-DQA2 [-35673bp] C - 12 T vs. C 0.308 (T) - <1 (-) 63 (-) >0.05
rs9275109 chr6:32649676 HLA-DQB1 [+13516bp] C - 6 T vs. G 0.383 (G) 0.175 (G) <1 (-) 0 (-) >0.05
rs9275309 chr6:32665258 HLA-DQB1 [+29098bp] C - 12 T vs. G 0.333 (T) 0.283 (T) >1 (-) 68 (-) >0.05
rs10484561 chr6:32665420 HLA-DQB1 [+29260bp] C - 11 T vs. G 0.133 (G) 0.033 (G) <1 (-) 75 (-) >0.05
rs17212469 chr6:32665153 HLA-DQB1 [+28993bp] C - 11 T vs. G 0.133 (T) - >1 (-) 75 (-) >0.05
rs3134993 chr6:32637778 HLA-DQB1 [+1618bp] C - 4 A vs. G 0.45 (G) 0.358 (G) <1 (-) 60 (-) >0.05
rs17212483 chr6:32665250 HLA-DQB1 [+29090bp] C - 11 T vs. C 0.133 (T) - >1 (-) 75 (-) >0.05
rs12526612 chr6:32653598 HLA-DQB1 [+17438bp] C - 6 A vs. G 0.133 (A) 0.033 (A) <1 (-) 12 (-) >0.05
rs9275396 chr6:32669528 HLA-DQB1 [+33368bp] C - 12 A vs. T 0.325 (A) 0.25 (A) <1 (-) 64 (-) >0.05

Association studies for this region [+]