HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs17212504 chr6:32665369 HLA-DQB1 [+29209bp] C - 11 A vs. G 0.133 (G) 0.058 (G) <1 (-) 75 (-) >0.05
rs9275237 chr6:32660612 HLA-DQB1 [+24452bp] C - 11 A vs. C 0.492 (A) 0.467 (C) <1 (-) 26 (-) >0.05
rs9275438 chr6:32671508 HLA-DQB1 [+35348bp] C - 12 T vs. C 0.325 (T) 0.275 (T) <1 (-) 61 (-) >0.05
rs9275439 chr6:32671521 HLA-DQB1 [+35361bp] C - 12 T vs. C 0.325 (C) 0.25 (C) >1 (-) 61 (-) >0.05
rs28635450 chr6:32592633 HLA-DQA1 [-3323bp] C - 3 A vs. T - - >1 (-) 0 (-) >0.05
rs9274713 chr6:32637341 HLA-DQB1 [+1181bp] C - 4 T vs. C - - <1 (-) 56 (-) >0.05
rs9274715 chr6:32637391 HLA-DQB1 [+1231bp] C - 4 A vs. G - - <1 (-) 58 (-) >0.05
rs9469220 chr6:32658310 HLA-DQB1 [+22150bp] C - 9 A vs. G 0.408 (A) 0.358 (G) >1 (-) 45 (-) >0.05
rs9274731 chr6:32637823 HLA-DQB1 [+1663bp] C - 4 A vs. G 0.383 (G) 0.392 (A) >1 (-) 56 (-) >0.05
rs9274732 chr6:32637825 HLA-DQB1 [+1665bp] C - 4 A vs. G 0.392 (A) 0.392 (G) <1 (-) 56 (-) >0.05
rs114325417 chr6:32666222 HLA-DQB1 [+30062bp] C - 11 A vs. C 0.017 (A) 0.075 (A) >1 (-) 0 (-) >0.05
rs112057165 chr6:32677822 HLA-DQA2 [-31297bp] C - 3 T vs. C - 0.017 (C) >1 (-) 19 (-) >0.05
rs28421666 chr6:32592737 HLA-DQA1 [-3219bp] C - 3 A vs. G - 0.067 (G) <1 (-) 0 (-) >0.05
rs115842332 chr6:32666213 HLA-DQB1 [+30053bp] C - 11 A vs. G 0.017 (A) 0.125 (A) >1 (-) 0 (-) >0.05
rs9274710 chr6:32637287 HLA-DQB1 [+1127bp] C - 4 C vs. G - - >1 (-) 59 (-) >0.05
rs116359969 chr6:32592110 HLA-DQA1 [-3846bp] C - 8 A vs. G 0.208 (G) - <1 (-) 55 (-) >0.05
rs9272213 chr6:32602039 HLA-DQA1 C - 4 A vs. T - - >1 (-) 0 (-) >0.05
rs60829415 chr6:32676697 HLA-DQA2 [-32422bp] C - 8 T vs. C - - <1 (-) 0 (-) >0.05
rs115276762 chr6:32674178 HLA-DQA2 [-34941bp] C - 10 T vs. C - 0.092 (T) >1 (-) 0 (-) >0.05
rs9275227 chr6:32660337 HLA-DQB1 [+24177bp] C - 11 C vs. G 0.483 (G) 0.483 (C) >1 (-) 24 (-) >0.05
rs9275228 chr6:32660347 HLA-DQB1 [+24187bp] C - 11 A vs. G 0.5 (G) 0.492 (G) <1 (-) 24 (-) >0.05
rs36160077 chr6:32666483 HLA-DQB1 [+30323bp] C - 11 T vs. C 0.133 (T) - >1 (-) 74 (-) >0.05
rs36188641 chr6:32666471 HLA-DQB1 [+30311bp] C - 11 A vs. G 0.133 (G) - <1 (-) 74 (-) >0.05
rs116459302 chr6:32666559 HLA-DQB1 [+30399bp] C - 11 T vs. C 0.017 (T) 0.133 (T) >1 (-) 0 (-) >0.05
rs9274730 chr6:32637817 HLA-DQB1 [+1657bp] C - 4 A vs. G 0.417 (A) 0.367 (G) <1 (-) 58 (-) >0.05
rs9272215 chr6:32602105 HLA-DQA1 C - 4 T vs. G 0.142 (T) - >1 (-) 0 (-) >0.05
rs34947241 chr6:32592239 HLA-DQA1 [-3717bp] C - 8 T vs. C 0.2 (C) 0.158 (C) <1 (-) 56 (-) >0.05
rs36186647 chr6:32666431 HLA-DQB1 [+30271bp] C - 11 T vs. C 0.133 (T) - >1 (-) 74 (-) >0.05
rs9272206 chr6:32601933 HLA-DQA1 C - 3 T vs. C - 0.108 (T) >1 (-) 0 (-) >0.05
rs114441380 chr6:32601533 HLA-DQA1 C - 3 A vs. T 0.158 (T) 0.142 (T) >1 (-) 21 (-) >0.05
rs9275224 chr6:32659878 HLA-DQB1 [+23718bp] C - 11 A vs. G 0.492 (A) 0.408 (A) >1 (-) 25 (-) >0.05
rs114169440 chr6:32662921 HLA-DQB1 [+26761bp] C - 3 A vs. C 0.125 (A) 0.033 (A) >1 (-) 0 (-) >0.05
rs5002702 chr6:32659158 HLA-DQB1 [+22998bp] C - 11 A vs. G 0.5 (G) 0.45 (G) <1 (-) 29 (-) >0.05
rs72847158 chr6:32664708 HLA-DQB1 [+28548bp] C - 11 T vs. C 0.133 (C) 0.05 (C) <1 (-) 75 (-) >0.05
rs12528622 chr6:32658259 HLA-DQB1 [+22099bp] C - 8 A vs. G 0.133 (A) 0.075 (A) >1 (-) 69 (-) >0.05
rs9272204 chr6:32601915 HLA-DQA1 C - 3 A vs. G - - >1 (-) 0 (-) >0.05
rs34411532 chr6:32592294 HLA-DQA1 [-3662bp] C - 8 A vs. G 0.2 (A) 0.158 (A) >1 (-) 56 (-) >0.05
rs9272256 chr6:32603169 HLA-DQA1 C - 4 T vs. C 0.15 (C) 0.075 (C) <1 (-) 9 (-) >0.05
rs9275425 chr6:32670874 HLA-DQB1 [+34714bp] C - 12 A vs. C 0.317 (A) 0.292 (A) <1 (-) 60 (-) >0.05
rs35230514 chr6:32591861 HLA-DQA1 [-4095bp] C - 8 T vs. C 0.183 (C) 0.133 (C) <1 (-) 56 (-) >0.05
rs17212546 chr6:32665615 HLA-DQB1 [+29455bp] C - 11 T vs. C 0.133 (T) - >1 (-) 74 (-) >0.05
rs12528368 chr6:32653643 HLA-DQB1 [+17483bp] C - 6 T vs. C 0.125 (C) 0.033 (C) >1 (-) 17 (-) >0.05
rs114361720 chr6:32664635 HLA-DQB1 [+28475bp] C - 11 C vs. G 0.133 (C) 0.033 (C) >1 (-) 75 (-) >0.05
rs115255544 chr6:32664628 HLA-DQB1 [+28468bp] C - 11 A vs. G 0.133 (G) 0.033 (G) <1 (-) 75 (-) >0.05
rs6923022 chr6:32664289 HLA-DQB1 [+28129bp] C - 11 T vs. G 0.133 (T) 0.033 (T) >1 (-) 76 (-) >0.05
rs17212937 chr6:32681339 HLA-DQA2 [-27780bp] C - 11 T vs. C 0.1 (T) 0.15 (T) <1 (-) 0 (-) >0.05
rs9274725 chr6:32637573 HLA-DQB1 [+1413bp] C - 4 T vs. C 0.433 (T) 0.467 (C) <1 (-) 60 (-) >0.05
rs9272244 chr6:32602860 HLA-DQA1 C - 4 T vs. G - - >1 (-) 11 (-) >0.05
rs35282906 chr6:32657201 HLA-DQB1 [+21041bp] C - 8 A vs. T 0.133 (A) 0.033 (A) >1 (-) 69 (-) >0.05
rs9274717 chr6:32637454 HLA-DQB1 [+1294bp] C - 4 A vs. C 0.442 (A) 0.308 (C) <1 (-) 61 (-) >0.05

Association studies for this region [+]