HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2647007 chr6:32664677 HLA-DQB1 [+28517bp] C - 12 T vs. G 0.075 (G) 0.175 (G) >1 (-) 0 (-) >0.05
rs9271528 chr6:32589923 HLA-DQA1 [-6033bp] C - 11 T vs. C 0.117 (T) 0.092 (T) >1 (-) 0 (-) >0.05
rs17205788 chr6:32651056 HLA-DQB1 [+14896bp] C - 4 A vs. C - 0.2 (A) >1 (-) 63 (-) >0.05
rs112394065 chr6:32665334 HLA-DQB1 [+29174bp] C - 7 T vs. C - 0.025 (C) >1 (-) 28 (-) >0.05
rs28371257 chr6:32658375 HLA-DQB1 [+22215bp] C - 10 T vs. G 0.075 (G) 0.208 (G) >1 (-) 0 (-) >0.05
rs115308106 chr6:32683666 HLA-DQA2 [-25453bp] C - 5 A vs. G - 0.042 (A) >1 (-) 0 (-) >0.05
rs17206287 chr6:32674725 HLA-DQA2 [-34394bp] C - 12 A vs. G 0.083 (G) 0.108 (G) >1 (-) 0 (-) >0.05
rs2856665 chr6:32665597 HLA-DQB1 [+29437bp] C - 12 A vs. G 0.075 (G) 0.008 (G) >1 (-) 0 (-) >0.05
rs28747060 chr6:32656614 HLA-DQB1 [+20454bp] C - 9 T vs. C 0.117 (T) - >1 (-) 17 (-) >0.05
rs201785404 chr6:32655996 HLA-DQB1 [+19836bp] C - 3 T vs. C - - <1 (-) 0 (-) >0.05
rs9272242 chr6:32602790 HLA-DQA1 C - 5 T vs. C 0.4 (C) 0.45 (C) <1 (-) 54 (-) >0.05
rs2647009 chr6:32661615 HLA-DQB1 [+25455bp] C - 11 A vs. T 0.067 (A) 0.175 (A) <1 (-) 0 (-) >0.05
rs111258791 chr6:32665695 HLA-DQB1 [+29535bp] C - 7 T vs. C - 0.025 (T) <1 (-) 28 (-) >0.05
rs2858308 chr6:32670000 HLA-DQB1 [+33840bp] C - 12 T vs. G 0.083 (T) 0.175 (T) <1 (-) 0 (-) >0.05
rs2647008 chr6:32661515 HLA-DQB1 [+25355bp] C - 11 A vs. C 0.075 (C) 0.175 (C) >1 (-) 0 (-) >0.05
rs28746932 chr6:32650217 HLA-DQB1 [+14057bp] C - 5 A vs. T 0.192 (A) 0.325 (A) >1 (-) 55 (-) >0.05
rs28746931 chr6:32650194 HLA-DQB1 [+14034bp] C - 5 A vs. G 0.192 (G) 0.333 (G) <1 (-) 55 (-) >0.05
rs62404084 chr6:32603321 HLA-DQA1 C - 5 T vs. C 0.242 (T) 0.158 (T) <1 (-) 65 (-) >0.05
rs17206005 chr6:32652069 HLA-DQB1 [+15909bp] C - 6 A vs. G 0.183 (G) 0.342 (G) <1 (-) 46 (-) >0.05
rs3129763 chr6:32590925 HLA-DQA1 [-5031bp] C - 11 A vs. G 0.117 (A) 0.1 (A) >1 (-) 0 (-) >0.05
rs9273499 chr6:32628306 HLA-DQB1 C - 3 T vs. G - - <1 (-) 64 (-) >0.05
rs2856697 chr6:32673230 HLA-DQA2 [-35889bp] C - 12 T vs. C - - <1 (-) 0 (-) >0.05
rs17212336 chr6:32652026 HLA-DQB1 [+15866bp] C - 6 A vs. C 0.183 (A) 0.342 (A) >1 (-) 45 (-) >0.05
rs17205998 chr6:32652050 HLA-DQB1 [+15890bp] C - 6 A vs. G 0.175 (G) 0.342 (G) <1 (-) 46 (-) >0.05
rs41288885 chr6:32685198 HLA-DQA2 [-23921bp] C - 11 A vs. G 0.083 (G) - <1 (-) 0 (-) >0.05
rs17212616 chr6:32674617 HLA-DQA2 [-34502bp] C - 12 A vs. G 0.083 (A) 0.083 (A) <1 (-) 0 (-) >0.05
rs77822419 chr6:32677447 HLA-DQA2 [-31672bp] C - 4 C vs. G - - >1 (-) 0 (-) >0.05
rs6941902 chr6:32684630 HLA-DQA2 [-24489bp] C - 3 T vs. C 0.058 (C) 0.058 (C) >1 (-) 0 (-) >0.05
rs9271541 chr6:32590070 HLA-DQA1 [-5886bp] C - 11 A vs. C 0.117 (C) 0.1 (C) <1 (-) 0 (-) >0.05
rs17212265 chr6:32651694 HLA-DQB1 [+15534bp] C - 5 T vs. C 0.175 (T) 0.283 (T) >1 (-) 57 (-) >0.05
rs28746934 chr6:32650436 HLA-DQB1 [+14276bp] C - 5 T vs. C 0.158 (C) 0.308 (C) <1 (-) 55 (-) >0.05
rs28747047 chr6:32655578 HLA-DQB1 [+19418bp] C - 6 T vs. C 0.158 (T) 0.308 (T) >1 (-) 25 (-) >0.05
rs28747048 chr6:32655584 HLA-DQB1 [+19424bp] C - 6 T vs. C 0.167 (T) 0.3 (T) >1 (-) 25 (-) >0.05
rs9273497 chr6:32628297 HLA-DQB1 C - 3 T vs. C - - >1 (-) 64 (-) >0.05
rs17206012 chr6:32652077 HLA-DQB1 [+15917bp] C - 6 A vs. C 0.175 (C) 0.333 (C) <1 (-) 46 (-) >0.05
rs9272062 chr6:32599265 HLA-DQA1 C - 3 A vs. G - - <1 (-) 0 (-) >0.05
rs17205914 chr6:32651680 HLA-DQB1 [+15520bp] C - 6 A vs. G 0.158 (G) 0.317 (G) <1 (-) 47 (-) >0.05
rs115777056 chr6:32664154 HLA-DQB1 [+27994bp] C - 11 A vs. C - 0.142 (A) >1 (-) 0 (-) >0.05
rs9275553 chr6:32676988 HLA-DQA2 [-32131bp] C - 9 T vs. G - - <1 (-) 0 (-) >0.05
rs2858312 chr6:32667230 HLA-DQB1 [+31070bp] C - 12 C vs. G 0.233 (C) 0.475 (C) <1 (-) 34 (-) >0.05
rs9272150 chr6:32601000 HLA-DQA1 C - 3 A vs. T 0.308 (A) 0.35 (A) >1 (-) 44 (-) >0.05
rs7755224 chr6:32652317 HLA-DQB1 [+16157bp] C - 5 A vs. T 0.158 (T) 0.3 (T) <1 (-) 46 (-) >0.05
rs28747063 chr6:32656668 HLA-DQB1 [+20508bp] C - 9 T vs. C - - <1 (-) 16 (-) >0.05
rs74756176 chr6:32664373 HLA-DQB1 [+28213bp] C - 11 T vs. G - 0.133 (T) >1 (-) 0 (-) >0.05
rs17205795 chr6:32651066 HLA-DQB1 [+14906bp] C - 4 T vs. C 0.183 (T) 0.242 (T) >1 (-) 63 (-) >0.05
rs28747061 chr6:32656653 HLA-DQB1 [+20493bp] C - 9 T vs. C - - >1 (-) 16 (-) >0.05
rs28747062 chr6:32656661 HLA-DQB1 [+20501bp] C - 9 T vs. C - - <1 (-) 16 (-) >0.05
rs17205738 chr6:32650762 HLA-DQB1 [+14602bp] C - 4 T vs. G - - <1 (-) 63 (-) >0.05
rs9272043 chr6:32598946 HLA-DQA1 C - 3 T vs. G 0.4 (G) 0.467 (G) >1 (-) 0 (-) >0.05
rs2858323 chr6:32660707 HLA-DQB1 [+24547bp] C - 11 T vs. C 0.075 (T) 0.192 (T) <1 (-) 0 (-) >0.05

Association studies for this region [+]