HLA-DQB1, chr6:32627244-32636160 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275326 chr6:32666660 HLA-DQB1 [+30500bp] All: C 99,286 13 T vs. C 0.175 (T) 0.083 (T) 0.80 (0.75-0.85) 2 (0-58) 5.81e-13
Meta_image?name=rs9275326

All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9272170 chr6:32601243 HLA-DQA1 C - 3 C vs. G 0.283 (G) 0.375 (G) <1 (-) 32 (-) >0.05
rs114147245 chr6:32682845 HLA-DQA2 [-26274bp] C - 4 T vs. C - - >1 (-) 0 (-) >0.05
rs28371281 chr6:32675814 HLA-DQA2 [-33305bp] C - 12 A vs. G 0.233 (G) 0.342 (G) >1 (-) 37 (-) >0.05
rs28371282 chr6:32675815 HLA-DQA2 [-33304bp] C - 12 T vs. C 0.242 (T) 0.333 (T) <1 (-) 37 (-) >0.05
rs28383257 chr6:32585680 HLA-DQA1 [-10276bp] C - 4 T vs. C 0.083 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs9272118 chr6:32600448 HLA-DQA1 C - 5 T vs. C 0.408 (T) 0.475 (T) >1 (-) 0 (-) >0.05
rs9272132 chr6:32600677 HLA-DQA1 C - 5 A vs. G 0.408 (G) 0.458 (G) <1 (-) 0 (-) >0.05
rs9272116 chr6:32600404 HLA-DQA1 C - 5 T vs. C 0.375 (C) 0.475 (C) <1 (-) 0 (-) >0.05
rs9272154 chr6:32601019 HLA-DQA1 C - 4 A vs. G 0.275 (A) 0.233 (A) <1 (-) 36 (-) >0.05
rs28383264 chr6:32585901 HLA-DQA1 [-10055bp] C - 3 T vs. C 0.133 (T) - >1 (-) 0 (-) >0.05
rs2395535 chr6:32657351 HLA-DQB1 [+21191bp] C - 9 A vs. C 0.15 (C) 0.483 (C) <1 (-) 18 (-) >0.05
rs141345764 chr6:32673811 HLA-DQA2 [-35308bp] C - 4 T vs. G - - >1 (-) 0 (-) >0.05
rs9272212 chr6:32602033 HLA-DQA1 C - 3 A vs. G - - >1 (-) 23 (-) >0.05
rs28383267 chr6:32585978 HLA-DQA1 [-9978bp] C - 3 A vs. G 0.125 (G) 0.033 (G) <1 (-) 0 (-) >0.05
rs28383269 chr6:32585995 HLA-DQA1 [-9961bp] C - 3 T vs. C 0.125 (C) - <1 (-) 0 (-) >0.05
rs4570006 chr6:32657257 HLA-DQB1 [+21097bp] C - 9 T vs. G 0.167 (T) 0.317 (T) >1 (-) 18 (-) >0.05
rs28383306 chr6:32586739 HLA-DQA1 [-9217bp] C - 3 A vs. T 0.1 (T) - <1 (-) 0 (-) >0.05
rs9271527 chr6:32589867 HLA-DQA1 [-6089bp] C - 10 T vs. C 0.192 (T) 0.225 (T) <1 (-) 0 (-) >0.05
rs9272182 chr6:32601564 HLA-DQA1 C - 3 A vs. G 0.333 (A) 0.442 (A) >1 (-) 34 (-) >0.05
rs9296035 chr6:32657888 HLA-DQB1 [+21728bp] C - 9 A vs. G 0.183 (G) 0.333 (G) <1 (-) 19 (-) >0.05
rs9272114 chr6:32600317 HLA-DQA1 C - 5 T vs. C 0.4 (C) 0.475 (C) <1 (-) 0 (-) >0.05
rs17205823 chr6:32651168 HLA-DQB1 [+15008bp] C - 7 T vs. G 0.158 (T) 0.342 (T) >1 (-) 41 (-) >0.05
rs28383303 chr6:32586648 HLA-DQA1 [-9308bp] C - 3 A vs. G 0.117 (G) - <1 (-) 0 (-) >0.05
rs9271558 chr6:32590348 HLA-DQA1 [-5608bp] C - 10 A vs. G 0.192 (G) 0.225 (G) >1 (-) 0 (-) >0.05
rs28383302 chr6:32586639 HLA-DQA1 [-9317bp] C - 3 A vs. G 0.117 (G) - <1 (-) 0 (-) >0.05
rs17205858 chr6:32651297 HLA-DQB1 [+15137bp] C - 7 T vs. C 0.183 (C) 0.342 (C) <1 (-) 40 (-) >0.05
rs28371308 chr6:32678162 HLA-DQA2 [-30957bp] C - 12 A vs. T 0.275 (A) 0.383 (A) <1 (-) 32 (-) >0.05
rs116315708 chr6:32683744 HLA-DQA2 [-25375bp] C - 5 A vs. T - - >1 (-) 0 (-) >0.05
rs2187668 chr6:32605884 HLA-DQA1 C - 7 T vs. C 0.1 (T) 0.058 (T) <1 (-) 22 (-) >0.05
rs9394110 chr6:32658471 HLA-DQB1 [+22311bp] C - 9 A vs. G 0.183 (G) 0.3 (G) <1 (-) 19 (-) >0.05
rs28371278 chr6:32675733 HLA-DQA2 [-33386bp] C - 12 A vs. G 0.267 (G) 0.358 (G) >1 (-) 37 (-) >0.05
rs17219176 chr6:32675313 HLA-DQA2 [-33806bp] C - 12 A vs. G 0.25 (A) 0.383 (A) <1 (-) 32 (-) >0.05
rs17212762 chr6:32675312 HLA-DQA2 [-33807bp] C - 12 T vs. C 0.267 (C) 0.367 (C) >1 (-) 33 (-) >0.05
rs62403978 chr6:32683705 HLA-DQA2 [-25414bp] C - 9 T vs. C - - <1 (-) 0 (-) >0.05
rs12177980 chr6:32686084 HLA-DQA2 [-23035bp] C - 12 A vs. G 0.35 (A) 0.325 (G) >1 (-) 15 (-) >0.05
rs2647083 chr6:32679722 HLA-DQA2 [-29397bp] C - 12 C vs. G 0.258 (G) 0.367 (G) >1 (-) 33 (-) >0.05
rs4538747 chr6:32657334 HLA-DQB1 [+21174bp] C - 8 A vs. T 0.15 (A) 0.325 (A) >1 (-) 28 (-) >0.05
rs9272158 chr6:32601122 HLA-DQA1 C - 4 A vs. G - - <1 (-) 26 (-) >0.05
rs10947320 chr6:32581491 HLA-DQA1 [-14465bp] C - 4 T vs. C 0.108 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9501648 chr6:32668886 HLA-DQB1 [+32726bp] C - 12 C vs. G 0.183 (G) 0.3 (G) >1 (-) 0 (-) >0.05
rs17211580 chr6:32602754 HLA-DQA1 C - 5 A vs. G 0.25 (A) 0.25 (A) <1 (-) 70 (-) >0.05
rs9272165 chr6:32601170 HLA-DQA1 C - 5 C vs. G - - <1 (-) 13 (-) >0.05
rs3104367 chr6:32603487 HLA-DQA1 C - 4 T vs. C 0.467 (T) 0.45 (T) >1 (-) 0 (-) >0.05
rs28752519 chr6:32584705 HLA-DQA1 [-11251bp] C - 4 T vs. C 0.117 (C) - <1 (-) 0 (-) >0.05
rs28383244 chr6:32584462 HLA-DQA1 [-11494bp] C - 4 A vs. G 0.108 (A) - >1 (-) 0 (-) >0.05
rs28383250 chr6:32585525 HLA-DQA1 [-10431bp] C - 4 A vs. T 0.133 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs17211601 chr6:32602817 HLA-DQA1 C - 5 T vs. G 0.258 (G) 0.258 (G) >1 (-) 70 (-) >0.05
rs28383251 chr6:32585567 HLA-DQA1 [-10389bp] C - 4 T vs. C 0.125 (T) 0.033 (T) >1 (-) 0 (-) >0.05
rs28772279 chr6:32673754 HLA-DQA2 [-35365bp] C - 12 A vs. C - - <1 (-) 4 (-) >0.05
rs5004278 chr6:32582401 HLA-DQA1 [-13555bp] C - 4 C vs. G 0.275 (C) 0.467 (G) >1 (-) 0 (-) >0.05

Association studies for this region [+]