HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs3213484 chr6:32725062 HLA-DQB2 C - 12 A vs. T 0.5 (T) 0.233 (T) <1 (-) 27 (-) >0.05
rs2857207 chr6:32743173 HLA-DQB2 [+11862bp] C - 12 A vs. G 0.383 (A) 0.275 (A) <1 (-) 7 (-) >0.05
rs9276411 chr6:32710475 HLA-DQA2 C - 11 T vs. C 0.5 (T) 0.117 (T) <1 (-) 20 (-) >0.05
rs7453920 chr6:32730012 HLA-DQB2 C - 12 A vs. G 0.492 (A) 0.142 (A) >1 (-) 20 (-) >0.05
rs115792074 chr6:32704965 HLA-DQA2 [-4154bp] C - 10 A vs. G 0.067 (G) - <1 (-) 0 (-) >0.05
rs9276555 chr6:32722754 HLA-DQB2 [-1121bp] C - 10 A vs. G 0.2 (A) 0.017 (A) <1 (-) 0 (-) >0.05
rs9276657 chr6:32746674 HLA-DQB2 [+15363bp] C - 12 T vs. G - - <1 (-) 12 (-) >0.05
rs2621404 chr6:32748633 HLA-DQB2 [+17322bp] C - 12 C vs. G 0.35 (G) 0.233 (G) >1 (-) 11 (-) >0.05
rs117541316 chr6:32737757 HLA-DQB2 [+6446bp] C - 11 T vs. G - 0.1 (G) <1 (-) 0 (-) >0.05
rs9276674 chr6:32749704 HLA-DQB2 [+18393bp] C - 12 T vs. C 0.358 (T) - <1 (-) 12 (-) >0.05
rs9276154 chr6:32698285 HLA-DQA2 [-10834bp] C - 10 A vs. G 0.367 (A) 0.125 (A) <1 (-) 38 (-) >0.05
chr6:32734144 chr6:32734144 HLA-DQB2 [+2833bp] C - 10 A vs. G - - <1 (-) 0 (-) >0.05
rs115942114 chr6:32705218 HLA-DQA2 [-3901bp] C - 5 A vs. G - - <1 (-) 28 (-) >0.05
rs16898264 chr6:32677152 HLA-DQA2 [-31967bp] C - 11 A vs. G 0.267 (A) 0.392 (A) >1 (-) 34 (-) >0.05
rs3213485 chr6:32724719 HLA-DQB2 C - 12 T vs. C 0.5 (T) 0.233 (T) >1 (-) 28 (-) >0.05
rs146048758 chr6:32772397 HLA-DOB [-8143bp] C - 4 A vs. G - - <1 (-) 0 (-) >0.05
rs9276583 chr6:32729880 HLA-DQB2 C - 12 A vs. G 0.5 (G) 0.142 (G) <1 (-) 21 (-) >0.05
rs2857172 chr6:32755023 HLA-DQB2 [+23712bp] C - 12 T vs. C 0.342 (T) 0.233 (T) <1 (-) 9 (-) >0.05
rs9469237 chr6:32689067 HLA-DQA2 [-20052bp] C - 12 T vs. C - - <1 (-) 16 (-) >0.05
rs2857170 chr6:32756961 HLA-DOB [-23579bp] C - 12 A vs. G - - <1 (-) 8 (-) >0.05
rs9276641 chr6:32744714 HLA-DQB2 [+13403bp] C - 12 A vs. G - - <1 (-) 10 (-) >0.05
rs2621401 chr6:32750279 HLA-DQB2 [+18968bp] C - 12 T vs. C - - <1 (-) 10 (-) >0.05
rs2857187 chr6:32750031 HLA-DQB2 [+18720bp] C - 12 T vs. C 0.35 (C) - >1 (-) 10 (-) >0.05
rs9276633 chr6:32744452 HLA-DQB2 [+13141bp] C - 12 A vs. G 0.4 (G) 0.233 (G) >1 (-) 8 (-) >0.05
chr6:32734150 chr6:32734150 HLA-DQB2 [+2839bp] C - 10 T vs. C - - >1 (-) 26 (-) >0.05
rs7760769 chr6:32746436 HLA-DQB2 [+15125bp] C - 12 A vs. G - - <1 (-) 5 (-) >0.05
rs6936428 chr6:32739174 HLA-DQB2 [+7863bp] C - 12 A vs. T 0.35 (A) 0.342 (T) >1 (-) 29 (-) >0.05
rs9276626 chr6:32743803 HLA-DQB2 [+12492bp] C - 12 T vs. C - - >1 (-) 0 (-) >0.05
rs28986401 chr6:32754767 HLA-DQB2 [+23456bp] C - 12 A vs. G 0.092 (A) - <1 (-) 0 (-) >0.05
rs28986402 chr6:32754781 HLA-DQB2 [+23470bp] C - 12 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs9276697 chr6:32756363 HLA-DOB [-24177bp] C - 12 T vs. C 0.342 (T) - <1 (-) 8 (-) >0.05
rs9276673 chr6:32749611 HLA-DQB2 [+18300bp] C - 12 T vs. G 0.45 (G) 0.242 (G) <1 (-) 7 (-) >0.05
rs1988565 chr6:32753492 HLA-DQB2 [+22181bp] C - 12 A vs. G 0.342 (G) 0.233 (G) >1 (-) 9 (-) >0.05
rs9276797 chr6:32778648 HLA-DOB [-1892bp] C - 12 A vs. G 0.4 (A) - >1 (-) 24 (-) >0.05
rs10484563 chr6:32703162 HLA-DQA2 [-5957bp] C - 10 A vs. G 0.075 (G) - <1 (-) 0 (-) >0.05
rs2857168 chr6:32757131 HLA-DOB [-23409bp] C - 12 T vs. C 0.342 (T) 0.25 (T) <1 (-) 9 (-) >0.05
rs9276423 chr6:32710855 HLA-DQA2 C - 11 A vs. G - - >1 (-) 23 (-) >0.05
rs9276422 chr6:32710848 HLA-DQA2 C - 11 T vs. G - - <1 (-) 23 (-) >0.05
rs2621388 chr6:32757938 HLA-DOB [-22602bp] C - 12 A vs. G 0.342 (A) 0.25 (A) <1 (-) 9 (-) >0.05
rs115326848 chr6:32707853 HLA-DQA2 [-1266bp] C - 5 C vs. G - - <1 (-) 30 (-) >0.05
rs114637299 chr6:32731774 HLA-DQB2 [+463bp] C - 3 T vs. C - - >1 (-) 43 (-) >0.05
rs9276556 chr6:32723233 HLA-DQB2 [-642bp] C - 10 C vs. G 0.2 (C) - <1 (-) 0 (-) >0.05
rs1988564 chr6:32753682 HLA-DQB2 [+22371bp] C - 12 T vs. C 0.342 (T) 0.233 (T) <1 (-) 9 (-) >0.05
rs117193872 chr6:32738627 HLA-DQB2 [+7316bp] C - 10 A vs. G - 0.092 (A) >1 (-) 0 (-) >0.05
rs1988563 chr6:32753739 HLA-DQB2 [+22428bp] C - 12 A vs. T 0.35 (A) 0.233 (A) <1 (-) 9 (-) >0.05
rs9276704 chr6:32756825 HLA-DOB [-23715bp] C - 12 T vs. G 0.342 (T) 0.242 (T) <1 (-) 9 (-) >0.05
rs9276640 chr6:32744684 HLA-DQB2 [+13373bp] C - 12 T vs. C - - >1 (-) 12 (-) >0.05
rs2857198 chr6:32746920 HLA-DQB2 [+15609bp] C - 12 T vs. C 0.342 (T) 0.233 (T) <1 (-) 10 (-) >0.05
rs2857196 chr6:32747012 HLA-DQB2 [+15701bp] C - 12 A vs. G 0.342 (G) 0.233 (G) >1 (-) 10 (-) >0.05
rs2857197 chr6:32746984 HLA-DQB2 [+15673bp] C - 12 T vs. C 0.342 (T) 0.233 (T) <1 (-) 10 (-) >0.05

Association studies for this region [+]