HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs2213572 chr6:32719804 MIR3135B [+2048bp] C - 12 A vs. G 0.492 (A) 0.233 (A) >1 (-) 25 (-) >0.05
rs73739311 chr6:32764763 HLA-DOB [-15777bp] C - 12 T vs. C - 0.05 (T) >1 (-) 4 (-) >0.05
rs117443797 chr6:32735475 HLA-DQB2 [+4164bp] C - 11 T vs. G - 0.083 (G) <1 (-) 0 (-) >0.05
rs2213571 chr6:32719937 MIR3135B [+2181bp] C - 12 C vs. G 0.492 (C) 0.233 (C) >1 (-) 25 (-) >0.05
rs2857139 chr6:32775465 HLA-DOB [-5075bp] C - 12 C vs. G 0.392 (C) 0.25 (C) <1 (-) 16 (-) >0.05
rs73739316 chr6:32766406 HLA-DOB [-14134bp] C - 12 T vs. C - 0.058 (C) <1 (-) 5 (-) >0.05
rs9276705 chr6:32756833 HLA-DOB [-23707bp] C - 12 T vs. C 0.433 (T) 0.242 (T) >1 (-) 9 (-) >0.05
rs2857169 chr6:32757080 HLA-DOB [-23460bp] C - 12 A vs. T 0.358 (T) 0.233 (T) >1 (-) 10 (-) >0.05
rs9276634 chr6:32744466 HLA-DQB2 [+13155bp] C - 12 A vs. G 0.367 (G) 0.233 (G) >1 (-) 8 (-) >0.05
rs28772284 chr6:32674313 HLA-DQA2 [-34806bp] C - 12 T vs. C 0.183 (T) 0.3 (T) >1 (-) 8 (-) >0.05
rs9275845 chr6:32691102 HLA-DQA2 [-18017bp] C - 11 T vs. C 0.467 (C) 0.25 (T) <1 (-) 8 (-) >0.05
rs9276016 chr6:32694784 HLA-DQA2 [-14335bp] C - 10 T vs. G 0.35 (T) 0.233 (G) >1 (-) 17 (-) >0.05
rs1158785 chr6:32758571 HLA-DOB [-21969bp] C - 12 T vs. C 0.433 (T) 0.25 (T) >1 (-) 5 (-) >0.05
rs9276414 chr6:32710594 HLA-DQA2 C - 11 C vs. G 0.5 (C) 0.158 (C) <1 (-) 21 (-) >0.05
rs2227133 chr6:32721392 HLA-DQB2 [-2483bp] C - 10 A vs. G 0.292 (G) 0.133 (G) <1 (-) 39 (-) >0.05
rs2621386 chr6:32758268 HLA-DOB [-22272bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs2857164 chr6:32758219 HLA-DOB [-22321bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs117162283 chr6:32735434 HLA-DQB2 [+4123bp] C - 11 A vs. G - 0.083 (A) >1 (-) 0 (-) >0.05
rs9276703 chr6:32756794 HLA-DOB [-23746bp] C - 12 A vs. T - - >1 (-) 9 (-) >0.05
rs2170184 chr6:32738479 HLA-DQB2 [+7168bp] C - 12 A vs. G 0.35 (A) 0.35 (G) >1 (-) 29 (-) >0.05
rs13203581 chr6:32752546 HLA-DQB2 [+21235bp] C - 12 A vs. G 0.083 (G) - >1 (-) 0 (-) >0.05
rs2157327 chr6:32719491 MIR3135B [+1735bp] C - 12 T vs. G 0.5 (G) 0.233 (G) <1 (-) 26 (-) >0.05
rs76453595 chr6:32732201 HLA-DQB2 [+890bp] C - 11 A vs. G - 0.117 (G) >1 (-) 0 (-) >0.05
rs2621387 chr6:32757971 HLA-DOB [-22569bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs79433101 chr6:32732586 HLA-DQB2 [+1275bp] C - 11 A vs. G - 0.092 (A) <1 (-) 0 (-) >0.05
rs9276523 chr6:32720514 MIR3135B [+2758bp] C - 12 A vs. T 0.492 (T) 0.233 (T) <1 (-) 25 (-) >0.05
rs116892158 chr6:32732603 HLA-DQB2 [+1292bp] C - 11 A vs. C - 0.092 (C) >1 (-) 0 (-) >0.05
rs73404817 chr6:32732661 HLA-DQB2 [+1350bp] C - 11 A vs. G - 0.092 (G) >1 (-) 0 (-) >0.05
rs57361865 chr6:32734891 HLA-DQB2 [+3580bp] C - 11 T vs. C - 0.092 (T) >1 (-) 0 (-) >0.05
rs116482079 chr6:32744415 HLA-DQB2 [+13104bp] C - 7 T vs. C 0.042 (T) 0.117 (T) <1 (-) 0 (-) >0.05
rs2859088 chr6:32701295 HLA-DQA2 [-7824bp] C - 11 T vs. C - - <1 (-) 0 (-) >0.05
rs2621389 chr6:32757532 HLA-DOB [-23008bp] C - 12 A vs. C 0.433 (C) 0.25 (C) <1 (-) 5 (-) >0.05
rs28772285 chr6:32674380 HLA-DQA2 [-34739bp] C - 12 T vs. G 0.183 (T) 0.325 (T) >1 (-) 7 (-) >0.05
rs9461799 chr6:32689529 HLA-DQA2 [-19590bp] C - 12 T vs. C 0.35 (C) 0.342 (T) <1 (-) 15 (-) >0.05
rs28772286 chr6:32674385 HLA-DQA2 [-34734bp] C - 12 T vs. C 0.183 (C) 0.308 (C) <1 (-) 7 (-) >0.05
rs9276638 chr6:32744593 HLA-DQB2 [+13282bp] C - 12 T vs. C - - <1 (-) 11 (-) >0.05
rs9276701 chr6:32756732 HLA-DOB [-23808bp] C - 12 C vs. G 0.35 (G) - >1 (-) 9 (-) >0.05
rs2857173 chr6:32754920 HLA-DQB2 [+23609bp] C - 12 A vs. G 0.342 (G) 0.233 (G) >1 (-) 6 (-) >0.05
rs9276351 chr6:32706416 HLA-DQA2 [-2703bp] C - 11 A vs. C 0.208 (A) 0.083 (A) >1 (-) 0 (-) >0.05
rs2857165 chr6:32757737 HLA-DOB [-22803bp] C - 12 A vs. G 0.433 (G) 0.25 (G) <1 (-) 5 (-) >0.05
rs9275847 chr6:32691133 HLA-DQA2 [-17986bp] C - 11 C vs. G 0.483 (C) 0.283 (G) >1 (-) 7 (-) >0.05
rs9276535 chr6:32721351 HLA-DQB2 [-2524bp] C - 12 A vs. G 0.492 (G) 0.233 (G) <1 (-) 26 (-) >0.05
rs138040914 chr6:32775965 HLA-DOB [-4575bp] C - 7 A vs. T - - >1 (-) 8 (-) >0.05
rs7769620 chr6:32721371 HLA-DQB2 [-2504bp] C - 12 T vs. C 0.492 (C) 0.233 (C) <1 (-) 26 (-) >0.05
rs2621384 chr6:32759273 HLA-DOB [-21267bp] C - 12 T vs. C 0.433 (C) 0.25 (C) <1 (-) 11 (-) >0.05
rs9276348 chr6:32706209 HLA-DQA2 [-2910bp] C - 11 A vs. G 0.208 (G) 0.05 (G) <1 (-) 0 (-) >0.05
rs9276431 chr6:32712247 HLA-DQA2 C - 11 T vs. C 0.492 (T) 0.175 (T) <1 (-) 29 (-) >0.05
rs9378125 chr6:32679732 HLA-DQA2 [-29387bp] C - 11 A vs. G 0.167 (G) 0.25 (G) <1 (-) 5 (-) >0.05
rs2857166 chr6:32757594 HLA-DOB [-22946bp] C - 12 T vs. G 0.433 (G) 0.25 (G) <1 (-) 5 (-) >0.05
rs9276432 chr6:32712384 HLA-DQA2 C - 11 T vs. C 0.492 (T) 0.175 (T) <1 (-) 29 (-) >0.05

Association studies for this region [+]