HLA-DQB2, chr6:32723875-32731311 +/- 50000 base pairs
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Most significant meta-analysis in this region
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Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs9275503 chr6:32673931 HLA-DQA2 [-35188bp] All: C 99,286 13 G vs. A 0.175 (G) - 0.78 (0.73-0.84) 0 (0-56) 1.84e-12
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All meta-analyses in this region

Polymorphism Location (hg19) Gene Ethnicity # Samples # Studies Allele contrast 1000G CEU 1000G CHB+JPT Meta OR (95%CI) I2 (95%CI) Meta P-value
rs62396667 chr6:32741158 HLA-DQB2 [+9847bp] C - 12 A vs. G 0.008 (G) - <1 (-) 0 (-) >0.05
rs2621421 chr6:32740671 HLA-DQB2 [+9360bp] C - 12 C vs. G 0.417 (G) 0.275 (G) <1 (-) 24 (-) >0.05
rs9275869 chr6:32691540 HLA-DQA2 [-17579bp] C - 10 A vs. G 0.317 (A) 0.25 (G) >1 (-) 18 (-) >0.05
rs9461808 chr6:32723665 HLA-DQB2 [-210bp] C - 4 T vs. C 0.075 (T) 0.033 (T) <1 (-) 0 (-) >0.05
rs9276447 chr6:32715569 HLA-DQA2 [+577bp] C - 11 T vs. G 0.492 (G) 0.233 (G) <1 (-) 31 (-) >0.05
rs9276585 chr6:32731313 HLA-DQB2 [+2bp] C - 12 A vs. T 0.2 (A) - <1 (-) 0 (-) >0.05
rs9276481 chr6:32717918 MIR3135B [+162bp] C - 11 A vs. T 0.492 (T) 0.233 (T) <1 (-) 30 (-) >0.05
rs9275683 chr6:32687329 HLA-DQA2 [-21790bp] C - 12 A vs. G 0.5 (A) 0.25 (G) <1 (-) 7 (-) >0.05
rs6457661 chr6:32737494 HLA-DQB2 [+6183bp] C - 12 T vs. C 0.35 (T) 0.242 (C) <1 (-) 23 (-) >0.05
rs60189437 chr6:32718267 MIR3135B [+511bp] C - 3 A vs. C - - <1 (-) 0 (-) >0.05
rs9275950 chr6:32693129 HLA-DQA2 [-15990bp] C - 10 T vs. C 0.5 (C) 0.258 (C) >1 (-) 18 (-) >0.05
rs6457656 chr6:32736978 HLA-DQB2 [+5667bp] C - 12 T vs. C 0.35 (C) 0.242 (T) >1 (-) 21 (-) >0.05
rs9461807 chr6:32723506 HLA-DQB2 [-369bp] C - 4 A vs. G 0.075 (G) 0.042 (G) >1 (-) 0 (-) >0.05
rs115454812 chr6:32739931 HLA-DQB2 [+8620bp] C - 10 A vs. G 0.008 (A) 0.133 (A) >1 (-) 0 (-) >0.05
rs2621394 chr6:32754409 HLA-DQB2 [+23098bp] C - 12 A vs. G 0.442 (A) - >1 (-) 11 (-) >0.05
rs9275758 chr6:32689191 HLA-DQA2 [-19928bp] C - 12 A vs. G 0.475 (A) 0.225 (G) <1 (-) 13 (-) >0.05
rs9276433 chr6:32712411 HLA-DQA2 C - 11 A vs. C 0.492 (A) 0.233 (A) <1 (-) 31 (-) >0.05
rs6457658 chr6:32737149 HLA-DQB2 [+5838bp] C - 12 A vs. G 0.342 (A) 0.242 (G) >1 (-) 23 (-) >0.05
rs2857182 chr6:32751179 HLA-DQB2 [+19868bp] C - 12 A vs. G 0.433 (A) 0.233 (A) >1 (-) 5 (-) >0.05
rs7382236 chr6:32778622 HLA-DOB [-1918bp] C - 12 T vs. C 0.4 (T) 0.25 (T) <1 (-) 11 (-) >0.05
rs150953172 chr6:32744988 HLA-DQB2 [+13677bp] C - 6 T vs. C - - >1 (-) 20 (-) >0.05
rs6457659 chr6:32737183 HLA-DQB2 [+5872bp] C - 12 A vs. C 0.35 (C) 0.242 (A) >1 (-) 24 (-) >0.05
rs2857175 chr6:32754398 HLA-DQB2 [+23087bp] C - 12 A vs. G - - <1 (-) 8 (-) >0.05
rs9276412 chr6:32710552 HLA-DQA2 C - 11 A vs. G 0.483 (A) 0.167 (G) >1 (-) 23 (-) >0.05
rs6457655 chr6:32735506 HLA-DQB2 [+4195bp] C - 12 T vs. G 0.35 (G) 0.242 (T) >1 (-) 23 (-) >0.05
rs2621420 chr6:32740761 HLA-DQB2 [+9450bp] C - 12 T vs. C 0.408 (T) 0.225 (T) <1 (-) 19 (-) >0.05
rs9296043 chr6:32736103 HLA-DQB2 [+4792bp] C - 12 T vs. C 0.35 (C) 0.233 (T) >1 (-) 24 (-) >0.05
rs9296044 chr6:32736144 HLA-DQB2 [+4833bp] C - 12 A vs. T 0.35 (A) 0.242 (T) <1 (-) 24 (-) >0.05
rs1585891 chr6:32736722 HLA-DQB2 [+5411bp] C - 12 T vs. C 0.35 (T) 0.242 (C) <1 (-) 24 (-) >0.05
rs9296041 chr6:32735861 HLA-DQB2 [+4550bp] C - 12 A vs. C 0.358 (C) 0.242 (A) >1 (-) 22 (-) >0.05
rs9296040 chr6:32735855 HLA-DQB2 [+4544bp] C - 12 A vs. G 0.35 (A) 0.242 (G) <1 (-) 22 (-) >0.05
rs9276584 chr6:32730835 HLA-DQB2 C - 12 T vs. C 0.2 (T) - <1 (-) 0 (-) >0.05
rs6457660 chr6:32737394 HLA-DQB2 [+6083bp] C - 12 T vs. G 0.35 (G) 0.242 (T) >1 (-) 23 (-) >0.05
rs9275576 chr6:32679326 HLA-DQA2 [-29793bp] C - 9 T vs. C 0.092 (T) - <1 (-) 0 (-) >0.05
rs2213568 chr6:32711576 HLA-DQA2 C - 11 A vs. C 0.492 (A) 0.308 (A) <1 (-) 30 (-) >0.05
rs7760779 chr6:32746464 HLA-DQB2 [+15153bp] C - 12 A vs. G - - <1 (-) 0 (-) >0.05
rs9276613 chr6:32743192 HLA-DQB2 [+11881bp] C - 12 C vs. G 0.35 (C) 0.242 (C) <1 (-) 10 (-) >0.05
rs9276614 chr6:32743193 HLA-DQB2 [+11882bp] C - 12 A vs. G 0.367 (A) 0.242 (A) <1 (-) 10 (-) >0.05
rs13203578 chr6:32752540 HLA-DQB2 [+21229bp] C - 12 A vs. G 0.092 (G) - <1 (-) 0 (-) >0.05
rs1585892 chr6:32736624 HLA-DQB2 [+5313bp] C - 12 A vs. G 0.35 (G) 0.242 (A) >1 (-) 24 (-) >0.05
rs13219960 chr6:32752641 HLA-DQB2 [+21330bp] C - 12 T vs. C 0.092 (C) - <1 (-) 0 (-) >0.05
rs2859056 chr6:32694420 HLA-DQA2 [-14699bp] C - 10 A vs. T 0.5 (T) 0.3 (A) 1 (-) 15 (-) >0.05
rs9275710 chr6:32688220 HLA-DQA2 [-20899bp] C - 12 T vs. G 0.492 (G) 0.242 (T) 1 (-) 6 (-) >0.05
rs6933763 chr6:32722852 HLA-DQB2 [-1023bp] C - 4 A vs. G - 0.033 (G) 1 (-) 0 (-) >0.05

Association studies for this region [+]